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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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WebPlotDigitizer Resource Report Resource Website 1000+ mentions |
WebPlotDigitizer (RRID:SCR_013996) | web service, data access protocol, service resource, software resource | Web based tool to extract data from plots, images, and maps. HTML5 based online tool to extract numerical data from plot images. Used to reverse engineer images of data visualizations to extract underlying numerical data. | Data extraction, plot, image, map, HTML5, numerical data extraction, plot image, reverse image, reverse data visualization |
is listed by: SoftCite is related to: Connected Researchers |
Free, Available for download, Freely available | https://apps.automeris.io/wpd/, https://github.com/ankitrohatgi/WebPlotDigitizer, https://github.com/ankitrohatgi/WebPlotDigitizer/releases | http://arohatgi.info/WebPlotDigitizer/ | SCR_013996 | WebPlotDigitizer Version 4.1, WebPlotDigitizer Version 4.2 | 2026-08-03 09:35:33 | 1786 | |||||||
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SoftCite Resource Report Resource Website |
SoftCite (RRID:SCR_024411) | portal, knowledge base, data or information resource, software resource, project portal | Gold standard dataset of software mentions in research publications. Provides dataset of annotated software mentions from full text academic literature in biomedicine and economics directly converted from published PDFs with reproducible infrastructure. Includes provenance, and is formatted for immediately usefulness in NLP. Useful for supervised learning at scale. | Gold standard dataset, software mentions, research publications, annotated software mentions, full text academic literature, |
lists: ProteinPilot lists: ROCit lists: survivalROC lists: GIFT lists: PyWavelets lists: pRRophetic lists: GOplot lists: Rgdal lists: riskRegression lists: RNAfold lists: RNALocate lists: pyPCcazip lists: ScanProsite lists: RapGreen lists: ABySS lists: AMBER lists: ANNOVAR lists: ASAP lists: ASPicDB lists: AStalavista lists: ATSAS lists: Alien hunter lists: Adobe Photoshop lists: Affymetrix lists: Augustus lists: Argus lists: Adobe Illustrator lists: ART lists: AutoDock Vina lists: AutoDock lists: ANALYZE lists: BLASTClust lists: arrayQualityMetrics lists: BLASTN lists: BLASTX lists: BLASTP lists: Bowtie lists: Autogrid lists: BRB-ArrayTools lists: BEDTools lists: BWA lists: BioEdit lists: BRASS lists: Bioconductor lists: BioExtract lists: BaCelLo lists: BioMoby lists: Brain Extraction Tool lists: Bowtie 2 lists: BoxPlotR lists: biomaRt lists: BioPerl lists: CANGS lists: CFX Manager lists: CEAS lists: BlobFinder lists: CLC Genomics Workbench lists: BREAKDANCER lists: CASAVA lists: CLC Main Workbench lists: ClustalW lists: Clustal W2 lists: ComBat lists: CCP4 lists: Blender lists: Coot lists: CGView lists: COMSOL Multiphysics lists: CTFFIND lists: CalcuSyn lists: ChIPpeakAnno lists: Chimera lists: CVODE lists: DAVID lists: Cufflinks lists: caret lists: ClueGO lists: Cluster lists: Clocklab lists: DIANA-mirPath lists: Cytoscape lists: EMAN lists: E-Prime lists: DESeq2 lists: Definiens Developer XD lists: Eigensoft lists: EMBOSS lists: Ensembl lists: DIALIGN lists: Design-Expert lists: EndNote lists: CMAP lists: EEGLAB lists: CMap lists: Epi Info lists: FASTA lists: Ensembl Genome Browser lists: Epik lists: FACS lists: FCS Express lists: Flowlogic lists: FSL lists: FLASH lists: FATCAT lists: FastQC lists: G*Power lists: GOLD lists: FGENESH lists: FreeSurfer lists: FlowJo lists: GeneTools lists: Galaxy lists: GATK lists: ELDA lists: GraphPad lists: GRADEpro lists: Fiji lists: Gblocks lists: FigTree lists: GENIE lists: GBrowse lists: Gemma lists: GeneChip Operating Software lists: GeneMapper lists: GeneMarker lists: GenABEL lists: GenePattern lists: GraphPad Prism lists: GenePix Pro lists: Google lists: Genesis lists: Hologic lists: GeneSpring GX lists: GeneVenn lists: HaploReg lists: Google Scholar lists: HALO lists: Gwyddion lists: IMAGIC lists: HKL-2000 lists: Glide lists: Glimmer lists: I-TASSER lists: GenomeStudio lists: IMOD lists: Haploview lists: Hmmer lists: Hydra lists: IUPRED lists: HomeCageScan lists: Geneious lists: IGOR Pro lists: IMPUTE lists: Infernal lists: Image-Pro Plus lists: JASP lists: LSM Image Examiner lists: Imaris lists: Image Pro Plus lists: ImageQuant lists: ImageJ lists: Integrative Genomics Viewer lists: jcvi lists: InterProScan lists: KaleidaGraph lists: Ligprep lists: Heidelberg Eye Explorer lists: JMP lists: Ingenuity Pathways Knowledge Base lists: Leica QWin lists: JCB DataViewer lists: Jalview lists: LigandScout lists: Ingenuity Pathway Analysis lists: LabView lists: Kepler lists: MAFFT lists: Jmol lists: ImageScope lists: MACS lists: Maq lists: MUMmer lists: MATLAB lists: Mimics lists: MACH lists: MCODE lists: Mascot lists: Maestro lists: MSQuant lists: MediaWiki lists: MINC lists: MRIcron lists: MOE lists: ModFit LT lists: LIMMA lists: MassLynx lists: mitopred lists: MrBayes lists: MolProbity lists: MUSCLE lists: MutationAssessor lists: MaxQuant lists: Minitab lists: MODELLER lists: MetaboAnalyst lists: MedCalc lists: Origin lists: MPlus lists: MutationTaster lists: MuTect lists: Multi Gauge lists: NIA Array Analysis lists: NIH Image lists: Phenix lists: MycoBank lists: OpenClinica lists: Nexus lists: OMTools lists: NIS-Elements lists: PAST lists: NVivo lists: PRISM (Stanford database) lists: Metscape lists: PROCHECK lists: oligo lists: OpenEpi lists: Pathway Commons lists: Nanoparticle Tracking Analysis lists: Openlab lists: PLINK lists: PAUP lists: NONMEM lists: PREFAB lists: NetworkX lists: PeptideProphet lists: Primer Designer lists: PhyML lists: PASS lists: PyMOL lists: PSIPRED lists: PROFILER lists: PHYLIP lists: Phobius lists: Prime lists: Phyutility lists: Picard lists: ProteinProphet lists: Phaser lists: ProSAS lists: PostgreSQL lists: Primer-BLAST lists: ProteinLynx Global Server lists: QUANTO lists: Primer Express lists: Primer3Plus lists: ProtTest lists: ProbCons lists: Primer3 lists: Poretools lists: Protein preparation Wizard lists: QmRLFS-finder lists: PicTar lists: RevMan lists: Pipeline Pilot lists: QIIME lists: PRISMA lists: REDCap lists: RAxML lists: Proteome Discoverer lists: Research Randomizer lists: SPARTAN lists: SPSS lists: RNAstructure lists: Refmac lists: QuantPrime lists: Prodigal lists: RepeatModeler lists: Ringo lists: SQLite lists: SAGE lists: Rhinoceros lists: SAMTOOLS lists: SPAdes lists: RepeatMasker lists: SEDFIT lists: STATISTICA lists: RNAhybrid lists: SlideBook lists: STRUCTURE lists: SABmark lists: SPM lists: Stata lists: RStudio lists: SciPy lists: Scion Image lists: Simulink lists: TAGGER lists: TopHat lists: SAM lists: ShortRead lists: SIFT lists: SCAN lists: SignalP lists: Scopus lists: Strelka2 lists: Trans-ABySS lists: Statgraphics Centurion lists: T-Coffee lists: Statistical Analysis System lists: TargetScan lists: UCHIME lists: Sequencher lists: SigmaStat lists: UCSC Genome Browser lists: affy lists: Taverna lists: MBF BioScience: Stereo Investigator lists: Trimmomatic lists: Vmatch lists: WFU PickAtlas lists: SigmaPlot lists: X!Tandem lists: STAR lists: TASSEL lists: SyStat lists: WEBLOGO lists: UCSF Chimera lists: TreeView lists: pheatmap lists: WinWCP lists: microRNA.org lists: glmnet lists: Phenix.refine lists: BASE lists: beadarray lists: RMS lists: lumi lists: Web of Science lists: minfi lists: geNORM lists: WU-BLAST lists: WinBUGS lists: SPP lists: tRNAscan-SE lists: WebPlotDigitizer lists: qBasePLUS lists: Matplotlib lists: TreeBASE lists: pClamp lists: TBLASTN lists: igraph lists: V3D lists: survival lists: miRanda lists: piRNABank lists: topGO lists: NGmerge lists: OMNISEC lists: NOTUNG lists: OpenBUGS lists: Optimization Toolbox lists: ProgRes Capture Pro lists: Ocular lists: Umediation lists: Nano Measurer lists: PHYLDOG lists: VSEARCH lists: WinNonlin lists: WHONET lists: ToposPro lists: Treerecs lists: Agilent Seahorse Wave lists: SimPhy lists: TomoStudio lists: Mutation Assessor lists: Stem lists: SRAMP lists: CRISPResso2 lists: geepack lists: Evalue lists: DAGitty lists: FastMulRFS lists: ggridges lists: gamm4 lists: AutoRT lists: CopyKAT lists: Inference of CRISPR Edits lists: classInt lists: ASTRAL-Pro lists: maftools lists: mitml lists: CMplot lists: MetaPSICOV lists: LaCyTools lists: MADOKA lists: Kaplan Meier Plotter lists: IntFOLD lists: ModFOLD lists: lDDT has parent organization: University of Texas at Austin; Texas; USA |
Sloan Foundation | DOI:10.1002/asi.24454 | Free, Available for download, Freely available | https://github.com/softcite/softcite_dataset_v2, https://zenodo.org/record/7995565 | SCR_024411 | Software Citation | 2026-08-03 09:38:40 | 0 | ||||||
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Connected Researchers Resource Report Resource Website |
Connected Researchers (RRID:SCR_013752) | software resource | A software registry providing links to software programs designed to aid researchers. Connected Researchers actively adds new resources to its registry along with descriptions and links to the software developer's site. | software registry, software, researchers, registry |
lists: Quartzy lists: CaptoMe lists: CiteULike lists: Colwiz lists: ContentMine lists: Data Elixir lists: DeepDyve lists: EvidenceFinder lists: MyScienceWork lists: Nowomics lists: Paperity lists: Paperscape lists: PubChase lists: PubGet lists: PubPeer lists: ReadCube lists: SciCurve lists: Sciencescape lists: Scizzle lists: Sparrho lists: Wiki Journal Club lists: Zotero lists: ACS ChemWorx lists: eLife Lens lists: eLife lists: Article of the Future lists: Interactive Science Publishing lists: PubReader lists: SHERPA RoMEO lists: Wiley Anywhere Article lists: Wiley Smart Article lists: SlideShare lists: Trellis lists: Kaggle lists: Benefunder lists: Experiment lists: Consano lists: Asana lists: ELabInventory lists: LabCritics lists: LabGuru lists: StrainControl lists: Docollab lists: Florida ExpertNet lists: DIRECT2experts lists: Biowebspin lists: BiomedUSA lists: Benchling lists: JournalReviewer lists: Edanz's journal advisor lists: Cofactor Science lists: RunMyCode lists: Google Charts lists: Exec&Share lists: Collage Authoring Environment lists: Peerage of Science lists: Writefull lists: Poetica lists: Penflip lists: Asciidoctor lists: Paperpile lists: EndNote lists: CitationStyles lists: Pivot lists: Grant Forward lists: WINGS lists: Wakari lists: Tableau Desktop lists: surf-incontext lists: StatCrunch lists: Plotly lists: machine learning open source software lists: Kitware lists: GenomeCompiler lists: Sweave lists: rOpenSci lists: Mercurial lists: IPython Notebook lists: GitLab lists: Dexy lists: CDE Tool lists: Duke Human Heart Repository lists: Biorepositories and Biospecimens Research Branch lists: Transcriptic lists: TetraScience lists: Emerald Cloud Lab lists: LabLog lists: labfolder lists: LabArchives lists: Findings App lists: elabFTW lists: Life Technologies Instrument Management lists: Zooniverse lists: Useful Science lists: DrawScience lists: ScienceExchange lists: ResearchConnection lists: Piirus lists: nanoHUB lists: MalariaWorld lists: LabRoots lists: GlobalEventList lists: Journalysis lists: SciRev lists: Academic Karma lists: Libre lists: Paper Critic lists: Publons lists: Pubmed Commons lists: PLOS Article-Level Metrics lists: Plum Analytics lists: Utopia Docs lists: ImpactStory lists: ResearchCompendia lists: SciVee lists: Dryad Digital Repository lists: Rubriq lists: 1DegreeBio lists: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) lists: Academic Joy lists: Assay Depot lists: InnoCentive is related to: CaptoMe is related to: CiteULike is related to: Colwiz is related to: ContentMine is related to: Data Elixir is related to: DeepDyve is related to: EvidenceFinder is related to: MyScienceWork is related to: Nowomics is related to: Paperity is related to: Paperscape is related to: PubChase is related to: PubGet is related to: PubPeer is related to: ReadCube is related to: SciCurve is related to: Sciencescape is related to: Scizzle is related to: Sparrho is related to: Wiki Journal Club is related to: Zotero is related to: ACS ChemWorx is related to: eLife Lens is related to: SHERPA RoMEO is related to: Wiley Anywhere Article is related to: Wiley Smart Article is related to: Trellis is related to: Academic Joy is related to: InnoCentive is related to: Kaggle is related to: Benefunder is related to: Experiment is related to: Consano is related to: Florida ExpertNet is related to: DIRECT2experts is related to: Biowebspin is related to: BiomedUSA is related to: Benchling is related to: JournalReviewer is related to: Edanz's journal advisor is related to: Cofactor Science is related to: Google Charts is related to: Peerage of Science is related to: Writefull is related to: Penflip is related to: Asciidoctor is related to: EndNote is related to: Pivot is related to: Grant Forward is related to: WINGS is related to: WebPlotDigitizer is related to: Wakari is related to: Tableau Desktop is related to: surf-incontext is related to: StatCrunch is related to: machine learning open source software is related to: Kitware is related to: Mercurial is related to: GitLab is related to: Dexy is related to: CDE Tool is related to: Duke Human Heart Repository is related to: Transcriptic is related to: TetraScience is related to: Emerald Cloud Lab is related to: LabLog is related to: labfolder is related to: LabArchives is related to: Findings App is related to: elabFTW is related to: Life Technologies Instrument Management is related to: Zooniverse is related to: Useful Science is related to: DrawScience is related to: ScienceExchange is related to: ResearchConnection is related to: Piirus is related to: nanoHUB is related to: MalariaWorld is related to: LabRoots is related to: GlobalEventList is related to: Journalysis is related to: SciRev is related to: Libre is related to: Plum Analytics is related to: Article of the Future is related to: PubReader is related to: RunMyCode is related to: Exec&Share is related to: Collage Authoring Environment is related to: Poetica is related to: Paperpile is related to: CitationStyles is related to: GenomeCompiler is related to: rOpenSci is related to: IPython Notebook is related to: Biorepositories and Biospecimens Research Branch is related to: Academic Karma is related to: Paper Critic is related to: Pubmed Commons is related to: Utopia Docs is related to: ResearchCompendia is related to: SciVee is related to: Dryad Digital Repository is related to: Quartzy is related to: 1DegreeBio is related to: eLife is related to: Interactive Science Publishing is related to: SlideShare is related to: Assay Depot is related to: Asana is related to: ELabInventory is related to: LabCritics is related to: StrainControl is related to: Docollab is related to: Sweave |
Free, Public | SCR_013752 | 2026-08-01 12:04:53 | 0 |
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