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URL: https://www.cs.cmu.edu/~jernst/stem/
Proper Citation: Stem (RRID:SCR_024499)
Description: Software tool for analysis of short time series gene expression data. Java program for clustering, comparing, and visualizing short time series gene expression data from microarray experiments. Allows to identify significant temporal expression profiles and genes associated with these profiles and to compare behavior of these genes across multiple conditions. STEM is fully integrated with the Gene Ontology.
Synonyms: Short Time-series Expression Miner
Resource Type: data processing software, data analysis software, software resource, software application
Defining Citation: PMID:16597342
Keywords: short time series gene expression data analysis, clustering, comparing, visualizing, short time series gene expression data, microarray experiments data, identify temporal expression profiles identify genes associated with expression profiles, compare behavior of genes across multiple conditions,
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