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URL: http://apps.cytoscape.org/apps/mcode
Proper Citation: MCODE (RRID:SCR_015828)
Description: Software that clusters a given network based on topology to find densely connected regions. It can be used to find protein complexes and parts of pathways in protein-protein interaction networks or protein families in protein similarity networks.
Resource Type: algorithm resource, data analysis software, data processing software, image analysis software, software application, software resource
Defining Citation: PMID:12525261, PMID:25570063
Keywords: cluster, clustering, graph analysis, network, network topology, interconnectivity
Funding: Canadian Institutes of Health Research (CIHR) ; MDS-Sciex ; Ontario Research and Development Challenge Fund
Availability: Free, Available for download
Resource Name: MCODE
Resource ID: SCR_015828
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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