Worldwide Protein Data Bank (wwPDB)
Resource Report
Resource Website
1000+ mentions
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Worldwide Protein Data Bank (wwPDB) (RRID:SCR_006555)
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wwPDB
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data or information resource, database
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Public global Protein Data Bank archive of macromolecular structural data overseen by organizations that act as deposition, data processing and distribution centers for PDB data. Members are: RCSB PDB (USA), PDBe (Europe) and PDBj (Japan), and BMRB (USA). This site provides information about services provided by individual member organizations and about projects undertaken by wwPDB. Data available via websites of its member organizations.
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3-dimentional, bioinformatics, protein, research, structure, macromolecule, structural data, 3d spatial image, gold standard
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is used by: Ligand Expo is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: Proteopedia - Life in 3D is related to: NRG-CING is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: DNA DataBank of Japan (DDBJ) is related to: PDBe - Protein Data Bank in Europe is related to: PDBe - Protein Data Bank in Europe is related to: PDBj - Protein Data Bank Japan is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: PDB Validation Server is related to: Structural Antibody Database is parent organization of: PDB-Dev works with: PDB-REDO
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BBSRC ; DOE ; European Molecular Biology Laboratory ; European Union ; Heidelberg; Germany ; Japan Science and Technology Agency ; NBDC - National Bioscience Database Center ; NCI ; NIDDK ; NIGMS ; NIH ; NINDS ; NLM ; NSF ; Wellcome Trust |
PMID:14634627 |
Free, Freely available |
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nif-0000-23903, r3d100011104 |
https://doi.org/10.17616/R3462V |
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SCR_006555 |
World Wide Protein DataBank, wwPDB, Worldwide Protein Data Bank (wwPDB), World Wide Protein Data Bank, Worldwide Protein DataBank |
2026-09-03 05:01:58 |
1340 |
PDB-Dev
Resource Report
Resource Website
10+ mentions
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PDB-Dev (RRID:SCR_016185)
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data repository, service resource, storage service resource
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Data repository for integrative/hybrid structural models of macromolecules and their assemblies. This includes atomistic models as well as multi-scale models consisting of different coarse-grained representations.
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protein, prototype, deposition, integration, hybrid, model, macromolecule, assembly, crystallography, spectroscopy, microscopy,
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is related to: IHM-dictionary has parent organization: Worldwide Protein Data Bank (wwPDB) has parent organization: Rutgers University; New Jersey; USA
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NSF DBI-1519158 |
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Account required, Freely available, The research community can contribute to this resource |
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SCR_016185 |
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2026-09-03 04:53:50 |
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NIDDK Information Network (dkNET)
Resource Report
Resource Website
10+ mentions
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NIDDK Information Network (dkNET) (RRID:SCR_001606)
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dkNET
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community building portal, data or information resource, database, portal
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The NIDDK Information Network (dkNET) is a community-based network to serve needs of basic and clinical investigators that includes large pools of data and research resources relevant to mission of National Institute of Diabetes and Digestive and Kidney Disease.
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dknet, data resource, diabetes, kidney, liver, disease, urology, hematology, digestive, nutrition, endocrine, obesity, metabolic
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uses: NIDDK Central Repository uses: Addgene uses: NIF Data Federation uses: Antibody Registry uses: Nuclear Receptor Signaling Atlas uses: GenitoUrinary Development Molecular Anatomy Project uses: Diabetic Complications Consortium uses: National Mouse Metabolic Phenotyping Centers uses: T1DBase uses: Beta Cell Biology Consortium uses: Grants.gov uses: dkNET Community Pilot Funding Opportunities uses: Integrated Grants uses: ClinicalTrials.gov uses: Integrated Animals uses: Intestinal Stem Cell Consortium recommends: Biological General Repository for Interaction Datasets (BioGRID) recommends: Cell Image Library (CIL) recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D) recommends: NIDDK Central Repository recommends: Network Data Exchange (NDEx) recommends: PeptideAtlas recommends: International Mouse Phenotyping Consortium (IMPC) recommends: FlyBase recommends: Metabolomics Workbench recommends: Zebrafish Information Network (ZFIN) recommends: Mouse Genome Informatics (MGI) recommends: Database of Interacting Proteins (DIP) recommends: UniProt recommends: PhysioNet recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) recommends: ClinicalTrials.gov recommends: dbVar recommends: Analysis, Visualization, and Informatics Lab-space (AnVIL) recommends: WormBase recommends: dbSNP recommends: GenBank recommends: DNA DataBank of Japan (DDBJ) recommends: Database of Genomic Variants Archive (DGVa) recommends: NCBI Sequence Read Archive (SRA) recommends: MGnify recommends: European Variation Archive (EVA) recommends: European Nucleotide Archive (ENA) recommends: Gene Expression Omnibus (GEO) recommends: NCBI Assembly Archive Viewer recommends: Protein Circular Dichroism Data Bank (PCDDB) recommends: miRBase recommends: Trace Archive recommends: UniProtKB recommends: Coherent X-Ray Imaging Data Bank (CXIDB) recommends: Electron Microscopy Data Bank at PDBe (MSD-EBI) recommends: Worldwide Protein Data Bank (wwPDB) recommends: Biological Magnetic Resonance Data Bank (BMRB) recommends: Crystallography Open Database (COD) recommends: PDBj - Protein Data Bank Japan recommends: Inorganic Crystal Structure Database (ICSD) recommends: Structural Biology Grid recommends: NCBI database of Genotypes and Phenotypes (dbGap) recommends: ArrayExpress recommends: EMDataResource.org recommends: Cambridge Crystallographic Data Centre (CCDC) recommends: PDBe - Protein Data Bank in Europe recommends: Japanese Genotype-phenotype Archive (JGA) recommends: PubChem BioAssay recommends: European Genome phenome Archive recommends: GenomeRNAi recommends: ProteomeXchange recommends: MetaboLights recommends: IntAct recommends: FLOWRepository recommends: Proteomics Identifications (PRIDE) recommends: Global Proteome Machine Database (GPM DB) recommends: Kinetic Models of Biological Systems (KiMoSys) recommends: ChEMBL recommends: Cancer Imaging Archive (TCIA) recommends: Image Data Resource (IDR) recommends: The Immunology Database and Analysis Portal (ImmPort) recommends: PubChem Substance recommends: NeuroMorpho.Org recommends: Cancer Nanotechnology Laboratory (caNanoLab) recommends: SICAS Medical Image Repository recommends: Mass spectrometry Interactive Virtual Environment (MassIVE) recommends: Dryad Digital Repository recommends: ZENODO recommends: NIH Figshare Archive recommends: STRENDA recommends: OpenNeuro recommends: Influenza Research Database (IRD) recommends: 1000 Functional Connectomes Project recommends: Mendeley Data recommends: Open Science Framework recommends: Dataverse Network Project recommends: NIMH Data Archive recommends: FigShare recommends: National Addiction and HIV Data Archive Program (NAHDAP) recommends: SPARC Portal recommends: Vivli is recommended by: National Library of Medicine lists: Diabetic Complications Consortium lists: Nephromine lists: LIPID Metabolites And Pathways Strategy lists: METLIN lists: NIDDK Inflammatory Bowel Disease Genetics Consortium lists: Body Mass Index Calculator lists: Symptom Score for Benign Prostatic Hyperplasia lists: Genetics of Kidneys in Diabetes lists: Type 1 Diabetes - Rapid Access to Intervention Development lists: TEDDY lists: Trans-Institute Angiogenesis Research Program lists: Consortium for Radiologic Imaging Studies of Polycystic Kidney Disease lists: Current Research Information System lists: Healthy People lists: Acute Liver Failure Study Group lists: Collaborative Islet Transplant Registry lists: Diabetes Prevention Type 1 lists: Epidemiology of Diabetes Interventions and Complications lists: NIH Division of Nutrition Research Coordination lists: Human Nutrition Research Information Management lists: Type 1 Diabetes Resource lists: National Diabetes Education Program lists: Pediatric Acute Liver Failure Study lists: Globin Gene Server lists: NIH Chronic Prostatitis Symptom Index lists: Sequencing of Idd regions in the NOD mouse genome lists: Look AHEAD lists: Teen-Longitudinal Assessment of Bariatric Surgery lists: Adult to Adult Living Donor Liver Transplantation Cohort Study lists: Behavior Enhances Drug Reduction of Incontinence lists: BARI 2D lists: Childhood Liver Disease Research and Education Network lists: Standardization of C-peptide measurements lists: CKID A Prospective Cohort Study of Kidney Disease in Children lists: Diabetes Prevention Program lists: Diabetes Prevention Program Outcomes Study lists: Irritable Bowel Syndrome Outcome Study lists: Folic Acid for Vascular Outcome Reduction in Transplantation lists: Type 1 Diabetes TrialNet lists: Diabetes Research in Children Network lists: Diabetic Retinopathy Clinical Research Network lists: Clinical Islet Transplantation Study lists: Nonalcoholic Steatohepatitis Clinical Research Network lists: Drug-Induced Liver Injury Network lists: Family Investigation of Nephropathy of Diabetes lists: Frequent Hemodialysis Network Daily Trial lists: HEALTHY study lists: SISTEr lists: Urinary Incontinence Treatment Network lists: TINSAL-T2D lists: TOMUS lists: Type 1 Diabetes Genetics Consortium lists: Center for Inherited Disease Research lists: Action to Control Cardiovascular Disease Risk in Diabetes Follow-up Study (ACCORDION) lists: Predicting Response to Standardized Pediatric Colitis Therapy (PROTECT) lists: Lifestyle Interventions for Expectant Moms (LIFE-Moms) lists: Hyperglycemia and Pregnancy Outcomes Follow-Up Study Consortium (HAPO-FUS) lists: Nephrotic Syndrome Study Network (NEPTUNE) lists: CKD Biomarkers Consortium lists: Porphyria Consortium lists: Vitamin D to Prevent Type 2 Diabetes (D2d) lists: Glycemic Reduction Approaches in Diabetes: A Comparative Effectiveness Study (GRADE) lists: Symptoms of Lower Urinary Tract Dysfunction Research Network (LURN) lists: Clinical Islet Transplantation Consortium (CITC) lists: Restoring Insulin Secretion Consortium (RISE) lists: Assessment Serial Evaluation and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) lists: Integrated Islet Distribution Program (IIDP) lists: Human Islet Research Network (HIRN) lists: Rare Kidney Stone Consortium (RKSC) lists: Evaluating Predictors and Interventions in Sphincter of Oddi Dysfunction lists: Efficacy and Mechanisms of Glutamine Dipeptide in the Surgical Intensive Care Unit lists: Intestinal Stem Cell Consortium lists: RiVuR lists: Gastroparesis Clinical Research Consortium lists: Urologic Diseases in America lists: United States Renal Data System lists: HALT PKD lists: Chronic Renal Insufficiency Cohort Study lists: Viral Resistance to Antiviral Therapy of Chronic Hepatitis C lists: Peginterferon and Ribavirin for Pediatric Patients with Chronic Hepatitis C lists: HALT-C Trial lists: TRIGR lists: Treatment Options for type 2 Diabetes in Adolescents and Youth lists: Study of Nutrition in Acute Pancreatitis lists: SEARCH for Diabetes in Youth lists: Organ Procurement and Transplantation Network lists: Nuclear Receptor Signaling Atlas lists: NIH Common Fund lists: Mutant Mouse Resource and Research Center lists: GenitoUrinary Development Molecular Anatomy Project lists: National Mouse Metabolic Phenotyping Centers lists: IPD-MHC- Major Histocompatibility Complex lists: High-dose Ursodiol Therapy of Primary Sclerosing Cholangitis lists: Hepatitis B Research Network lists: Functional Dyspepsia Treatment Trial lists: Cooperative Study Group for Autoimmune Disease Prevention lists: Clinical Outcomes Research Initiative lists: BISC lists: Beta Cell Biology Consortium lists: Autoimmunity Centers of Excellence lists: HemBase lists: Longitudinal Assessment of Bariatric Surgery lists: Minnesota Liver Tissue Cell Distribution System lists: Knockout Mouse Project lists: Immune Tolerance Network (ITN) lists: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D) lists: ReBuilding a Kidney lists: GOA lists: NURSA Transcriptomine lists: STRING lists: Nuclear Receptor Cistrome lists: EuReGene lists: Embryo Images Normal and Abnormal Mammalian Development lists: Stem Cell Genome Anatomy Projects lists: Eurexpress lists: Gene Expression Database lists: ToppGene Suite lists: GATACA GUDMAP Gene Explorer lists: Knockout Mouse Project Repository lists: Cornell Heart Lung Blood Resource for Optogenetic Mouse Signaling (CHROMus) lists: International Mouse Phenotyping Consortium (IMPC) lists: Juvenile Diabetes Research Foundation lists: NIDDK Central Repository lists: Biospecimens/Biorepositories: Rare Disease-HUB (RD-HUB) lists: Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) lists: T1DBase lists: NCI Specimen Resource Locator lists: NCBI database of Genotypes and Phenotypes (dbGap) lists: caHUB lists: T1D Exchange lists: NCBI lists: LANDMark BioBanks lists: Diabetes Research Centers lists: Network for Pancreatic Organ Donors with Diabetes lists: Nutrition and Obesity Research Centers lists: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Antibody Validation and Vector Core lists: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Cell Culture and Engineering lists: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Clinical and Translational Core Resource lists: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center Mouse Models and Biobank lists: Baltimore Polycystic Kidney Disease (PKD) Research and Clinical Core Center lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Bioinformatics Resource lists: Boston Area Diabetes Endocrinology Research Center Cell Biology and Morphology Core Facility lists: Boston Area Diabetes Endocrinology Research Center Metabolic Physiology and Energy Balance Core Facility lists: Boston Area Diabetes Endocrinology Research Center Molecular Biology lists: Boston Area Diabetes Endocrinology Research Center Pancreatic Islet lists: Boston Area Diabetes Endocrinology Research Center lists: Boston Area Diabetes Endocrinology Research Center Transgenic lists: Boston Children's Hospital Center of Excellence in Molecular Hematology Mouse Embryonic Stem(ES) Cell and Gene Targeting Core lists: Boston Children's Hospital Center of Excellence in Molecular Hematology lists: Boston Children's Hospital Center of Excellence in Molecular Hematology Stem Cell Engineering and Analysis Core lists: Boston Children's Hospital Center of Excellence in Molecular Hematology Zebrafish Core lists: Boston Nutrition and Obesity Research Centers Adipose Biology and Nutrient Metabolism Core lists: Boston Nutrition and Obesity Research Centers Administrative Core lists: Boston Nutrition and Obesity Research Centers Epidemiology and Genetics Core lists: Boston Nutrition and Obesity Research Centers Functional Genomics and Bioinformatics Core lists: Boston Nutrition and Obesity Research Centers lists: Boston Nutrition and Obesity Research Centers Transgenic Core lists: Center for American Indian and Alaska Native Diabetes Translational Research Administrative Core lists: Center for American Indian and Alaska Native Diabetes Translational Research National Resource lists: Center for American Indian and Alaska Native Diabetes Translational Research Resource lists: Center for American Indian and Alaska Native Diabetes Translational Research lists: Center for Iron and Heme Disorders at the University of Utah Administrative Core lists: Center for Iron and Heme Disorders at the University of Utah Iron and Heme Core lists: Center for Iron and Heme Disorders at the University of Utah Metabolomics Core lists: Center for Iron and Heme Disorders at the University of Utah Mutation Generation and Detection Core lists: Center for Iron and Heme Disorders at the University of Utah lists: Center for the Study of Inflammatory Bowel Disease Clinical Core lists: Center for the Study of Inflammatory Bowel Disease Genetic Animal Models Core lists: Center for the Study of Inflammatory Bowel Disease Genetics Genomics and Molecular Biology Core lists: Center for the Study of Inflammatory Bowel Disease Immunology Core lists: Center for the Study of Inflammatory Bowel Disease Morphology Core lists: Center for the Study of Inflammatory Bowel Disease lists: Centers for Diabetes Translation Research lists: Chicago Center for Diabetes Translation Research Health Disparities and Community-Based Participatory Research Core lists: Chicago Center for Diabetes Translation Research Outcomes Improvement Core lists: Chicago Center for Diabetes Translation Research Quantitative Analysis Core lists: Chicago Center for Diabetes Translation Research lists: Cincinnati Digestive Health Center Clinical Component-Data Analysis and Management lists: Cincinnati Children's Hospital Digestive Health Center lists: Cincinnati Digestive Health Center Integrative Morphology lists: Cincinnati Digestive Health Center Pluripotent Stem Cell and Organoid Core lists: Cincinnati Digestive Health Center lists: Cleveland Digestive Diseases Research Core Center lists: Cleveland Digestive Diseases Research Core Facilities lists: Columbia Diabetes Research Center Advanced Tissue Pathology and Imaging Core Facility lists: Columbia Diabetes Research Center Flow Cytometry and Cell Sorting Core Facility lists: Columbia Diabetes Research Center Mouse Metabolic Function and Phenotyping Core Facility lists: Columbia Diabetes Research Center lists: Columbia Diabetes Research Center Translational Biomarker Analytical Core Facility lists: Columbia University George M. O'Brien Urology Center lists: CURE - Digestive Diseases Research Center Administrative Core lists: CURE - Digestive Diseases Research Center Animal Models Core lists: CURE - Digestive Diseases Research Center Human Studies Core lists: CURE - Digestive Diseases Research Center Molecular Biology and Peptidomics Core lists: CURE - Digestive Diseases Research Center Morphology and Imaging Core lists: CURE - Digestive Diseases Research Center lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Clinical Translational Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Histology Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Michael Hooker Microscopy Core Facility lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Molecular Biology Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Mouse Models Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Mucus and Mucin Biochemistry and Biophysics Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Pre-Clinical Core lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center lists: Cystic Fibrosis and Pulmonary Diseases Research and Treatment Center Tissue Procurement and Cell Culture Core lists: Cystic Fibrosis Center - University of California San Francisco lists: Cystic Fibrosis Center University of Pittsburgh lists: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core lists: Cystic Fibrosis Center - University of Washington Clinical Core lists: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program lists: Cystic Fibrosis Center - University of Washington Host Response Core lists: Cystic Fibrosis Center - University of Washington Microbiology Core lists: Cystic Fibrosis Center - University of Washington lists: Cystic Fibrosis Research and Translation Centers lists: Digestive Disease Centers lists: Duke O'Brien Center for Kidney Research Animal Models Core lists: Duke O'Brien Center for Kidney Research Clinical and Translational Core lists: Duke O'Brien Center for Kidney Research Renal Genomics Core lists: Duke O'Brien Center for Kidney Research lists: Einstein-Mount Sinai Diabetes Research Center Animal Physiology Core Facility lists: Einstein-Mount Sinai Diabetes Research Center Biomarker Analytic Research Core Facility lists: Einstein-Mount Sinai Diabetes Research Center Human Islet and Adenovirus Core Facility lists: Einstein-Mount Sinai Diabetes Research Center lists: Einstein-Mount Sinai Diabetes Research Center Stable Isotope and Metabolomics Core Facility lists: Einstein-Mount Sinai Diabetes Research Center Translational Research Core Facility lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Antibody Technology lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Arnold Library lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Comparative Medicine lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Electron Microscopy lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Experimental Histopathology Shared Resource lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Flow Cytometry lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Genomics Shared Resource lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Glassware Services lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Proteomics Resource lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Research Freezers and Sample Storage Resource lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Scientific Imaging lists: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology Specimen Processing/Research Cell Bank lists: George M. O'Brien Kidney Center at Yale Human Genetics and Clinical Research Core lists: George M. O'Brien Kidney Center at Yale Mouse Genetics and Cell Line Core lists: George M. O'Brien Kidney Center at Yale Renal Physiology Core lists: George M. O'Brien Kidney Center at Yale lists: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Animal Models Core lists: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Cell Biology and Imaging Core lists: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Clinical and Translational Core lists: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center Physiology Core lists: George M. O'Brien Kidney Research Core Center - UT Southwestern Medical Center lists: Georgia Center for Diabetes Translation Research Design and Evaluation Core Facility lists: Georgia Center for Diabetes Translation Research Disparities Core lists: Georgia Center for Diabetes Translation Research Engagement and Behavior Change Core lists: Georgia Center for Diabetes Translation Research lists: Gregory Fleming James Cystic Fibrosis Research Center Assay Core lists: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core lists: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core lists: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core lists: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core lists: Gregory Fleming James Cystic Fibrosis Research Center lists: Health Delivery Systems Center for Diabetes Translational Research California State Resource Program lists: Health Delivery Systems Center for Diabetes Translational Research Diabetes and Obesity Prevention Core lists: Health Delivery Systems Center for Diabetes Translational Research Health Disparities Core lists: Health Delivery Systems Center for Diabetes Translational Research Health Information Technology Core lists: Health Delivery Systems Center for Diabetes Translational Research lists: Hematology Centers lists: Indiana University School of Medicine Center for Diabetes and Metabolic Diseases Islet and Physiology Core Facility lists: Indiana Diabetes Research Center Microscopy Core Facility lists: Indiana Diabetes Research Center lists: Indiana Diabetes Research Center Swine Core lists: Indiana Diabetes Research Center Translation Core Facility lists: Indiana O'Brien Center for Advanced Microscopic Analysis Administration Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis Biosensor Development Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis Digital Image Analysis Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis Education Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis Intravital Microscopy Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis Probe Delivery Core lists: Indiana O'Brien Center for Advanced Microscopic Analysis lists: Indiana University Cooperative Center of Excellence in Hematology Angiogenesis Core lists: Indiana University Cooperative Center of Excellence in Hematology Experimental Mouse Resources Core lists: Indiana University School of Medicine Flow Cytometry Core Facility lists: Indiana University Cooperative Center of Excellence in Hematology Optical Microscopy Core lists: Indiana University Cooperative Center of Excellence in Hematology lists: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core lists: Johns Hopkins University - University of Maryland Diabetes Research Center lists: Joslin Diabetes Center Advanced Genomics and Genetics Core Facility lists: Joslin Diabetes Center Advanced Microscopy Core Facility lists: Joslin Diabetes Center Animal Physiology Core Facility lists: Joslin Diabetes Center Bioinformatics and Biostatistics Core lists: Joslin Diabetes Center Enrichment Core lists: Joslin Diabetes Center Flow Cytometry Core Facility lists: Joslin Diabetes Center Induced Pluripotent Stem Cell Core lists: Joslin Diabetes Center lists: Marion Bessin Liver Research Center Animal Models Stem Cells and Cell Therapy lists: Marion Bessin Liver Research Center Genetic Engineering and Gene Therapy lists: Marion Bessin Liver Research Center Imaging and Cell Structure lists: Marion Bessin Liver Research Center lists: Mayo Clinic Center for Cell Signaling in Gastroenterology Clinical Core lists: Mayo Clinic Center for Cell Signaling in Gastroenterology Gene Editing and Cell Engineering Core lists: Mayo Clinic Center for Cell Signaling in Gastroenterology Optical Microscopy Core lists: Mayo Clinic Center for Cell Signaling in Gastroenterology lists: Mayo Clinic O'Brien Urology Center Biostatistics and Epidemiology Core lists: Mayo Clinic O'Brien Urology Center Imaging Core lists: Mayo Clinic O'Brien Urology Center lists: Mayo Clinic O'Brien Urology Center Urine Phenotyping Core lists: Michigan Center for Diabetes Translational Research Administrative Core Facility lists: Michigan Center for Diabetes Translational Research Intervention and Technology Research Core lists: Michigan Center for Diabetes Translational Research Leveraging Community, Peer, and Family Support Core Facility lists: Michigan Center for Diabetes Translational Research Methods and Measurements Core lists: Michigan Diabetes Research Center Animal Studies Core lists: Michigan Diabetes Research Center Clinical Core Facility lists: Michigan Diabetes Research Center Microscopy and Image Analysis Core Facility lists: Michigan Diabetes Research Center Molecular Genetics Core Facility lists: Michigan Diabetes Research Center OMICS Core lists: Michigan Diabetes Research Center lists: Mid-Atlantic Nutrition Obesity Research Center Biological Mechanisms and Functional Genomics Core lists: Mid-Atlantic Nutrition Obesity Research Center Biostatistics and Medical Informatics Subcore lists: Mid-Atlantic Nutrition Obesity Research Center Clinical and Translational Research Core lists: Mid-Atlantic Nutrition Obesity Research Center Molecular Genetics and Nutrigenomics Core lists: Mid-Atlantic Nutrition Obesity Research Center lists: MMPC-University of California Davis Administrative Core lists: MMPC-University of California Davis Animal Care Surgery and Pathology Core lists: MMPC-University of California Davis Endocrinology and Metabolism Core lists: MMPC-University of California Davis Energy Balance Exercise and Behavior Core lists: MMPC-University of California Davis Microbiome and Host Response Core lists: MMPC-University of California Davis lists: MMPC-University of Cincinnati Medical Center Cardiovascular and Renal Function Core lists: MMPC-University of Cincinnati Medical Center Energy Metabolism Food Intake and Body Weight Regulation Core lists: MMPC-University of Cincinnati Medical Center Lipid Lipoprotein and Glucose Metabolism Core lists: MMPC-University of Cincinnati Medical Center lists: MMPC-University of Massachusetts Medical School Analytical Core lists: MMPC-University of Massachusetts Medical School Animal Care Core lists: MMPC-University of Massachusetts Medical School Cardiovascular Core lists: MMPC-University of Massachusetts Medical School Humanized Mouse Cell Transplantation and Assessment Core lists: MMPC-University of Massachusetts Medical School Islet Core lists: MMPC-University of Massachusetts Medical School Metabolism Core lists: University of Massachusetts Medical School Metabolic Disease Research Center Core Facility lists: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core lists: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core lists: MMPC-University of Michigan Medical School Microbiome Core lists: MMPC-University of Michigan Medical School Microvascular Complications Core lists: MMPC-University of Michigan Medical School lists: MMPC-Vanderbilt University School of Medicine Analytical Resources Core lists: MMPC-Vanderbilt University School of Medicine Animal Health and Welfare Core lists: MMPC-Vanderbilt University School of Medicine Cardiovascular Pathophysiology Core lists: MMPC-Vanderbilt University School of Medicine Metabolic Regulation Core lists: MMPC-Vanderbilt University School of Medicine lists: Molecular Biology and Next Generation Technology lists: Mucosal HIV and Immunobiology Center Genetically-Defined Microbe Core lists: Mucosal HIV and Immunobiology Center Gnotobiotic and Genetically-Engineered Mouse Core lists: Mucosal HIV and Immunobiology Center Molecular Pathology and Human Cell and Tissue Core lists: Mucosal HIV and Immunobiology Center lists: New York Obesity Nutrition Research Center Animal Phenotyping Core lists: New York Obesity Nutrition Research Center Human Phenotyping Core lists: New York Obesity Nutrition Research Center lists: New York Regional Center for Diabetes Translation Research Latino Network for Diabetes Translational Research lists: New York Regional Center for Diabetes Translation Research Life Course Methodology Core lists: New York Regional Center for Diabetes Translation Research Population Health and Health Systems Core lists: New York Regional Center for Diabetes Translation Research lists: New York Regional Center for Diabetes Translation Research Translational Intervention Methodology Core lists: Nutrition and Obesity Research Centers at Harvard Administrative Core lists: Nutrition and Obesity Research Centers at Harvard Genomics and Cell Biology Core lists: Nutrition and Obesity Research Centers at Harvard Metabolic Imaging Core lists: Nutrition and Obesity Research Centers at Harvard Metabolic Phenotyping Core lists: Nutrition and Obesity Research Centers at Harvard lists: Nutrition and Obesity Research Centers at Harvard Statistical Consultation lists: O'Brien Center for Benign Urologic Research at University of Wisconsin-Madision and University of Massachusetts-Boston Rodent Urinary Function Testing Core lists: O'Brien Center for Benign Urologic Research at University of Wisconsin-Madision and University of Massachusetts-Boston lists: O'Brien Kidney Centers lists: O'Brien Urology Centers lists: Pediatric Centers of Excellence in Nephrology at Cincinnati Children's Hospital Medical Center Biomarker Core lists: Pediatric Centers of Excellence in Nephrology at Cincinnati Children's Hospital Medical Center Gene Expression Core lists: Cincinnati Children's Hospital Pediatric Center of Excellence lists: Pediatric Centers of Excellence in Nephrology at Cincinnati Children's Hospital Medical Center lists: Pediatric Centers of Excellence in Nephrology at Duke Division of Pediatric Nephrology lists: Pediatric Centers of Excellence in Nephrology at University of Virginia lists: Penn Diabetes Research Center Functional Genomics Core lists: Penn Diabetes Research Center Metabolomics Core lists: Penn Diabetes Research Center Mouse Phenotyping Physiology and Metabolism Core lists: University of Pennsylvania School of Medicine Penn Diabetes Research Center Pancreatic Islet Cell Biology Core Facility lists: Penn Diabetes Research Center Radioimmunoassay and Biomarkers Core Facility lists: Penn Diabetes Research Center lists: Penn Diabetes Research Center Transgenic and Chimeric Mouse Core Facility lists: Louisiana State University Pennington Biomedical Nutrition Obesity Research Center Core Facility lists: Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core lists: Pennington Biomedical Research Center Nutrition and Obesity Research Center Human Phenotyping Core lists: Pennington Biomedical Research Center Nutrition and Obesity Research Center Molecular Mechanisms Core lists: Pennington Biomedical Research Center Nutrition and Obesity Research Center lists: Pittsburgh Center for Kidney Research Biostatistical Analysis Services lists: Pittsburgh Center for Kidney Research Cellular Physiology lists: Pittsburgh Center for Kidney Research Kidney Imaging lists: Pittsburgh Center for Kidney Research Model Organisms lists: Pittsburgh Center for Kidney Research lists: Pittsburgh Center for Kidney Research Single Nephron and Metabolomics lists: Polycystic Kidney Disease Research and Translation Centers lists: Texas Medical Center Digestive Diseases Center Administrative Core lists: Texas Medical Center Digestive Diseases Center Cellular and Molecular Morphology Core lists: Texas Medical Center Digestive Diseases Center Functional Genomics and Microbiome lists: Texas Medical Center Digestive Diseases Center Integrative Biology Core lists: Texas Medical Center Digestive Diseases Center lists: Texas Medical Center Digestive Diseases Center Study Design and Clinical Research Core Services lists: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Human Imaging Core lists: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Model Systems Core lists: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester Molecular Genetics and Biomarker Core lists: Translational Polycystic Kidney Disease (PKD) Center at Mayo Clinic Rochester lists: UAB Hepatorenal Fibrocystic Diseases Core Center Cellular Physiology Resource lists: UAB Hepatorenal Fibrocystic Diseases Core Center Engineered Models Resource lists: UAB Hepatorenal Fibrocystic Diseases Core Center Hepato-Renal Fibrocystic Diseases Translational Resource lists: UAB Hepatorenal Fibrocystic Diseases Core Center lists: UAB Hepatorenal Fibrocystic Diseases Core Center Therapeutic Screening and Drug Development Resource lists: UAB-UCSD Core Center for Acute Kidney Injury Research Administrative Core lists: UAB-UCSD Core Center for Acute Kidney Injury Research Bioanalytical Core lists: University of Alabama at Birmingham-University of California San Diego O'Brien Center for Acute Kidney Injury Research Biostatistical Core lists: UAB-UCSD Core Center for Acute Kidney Injury Research Clinical Studies of AKI lists: UAB-UCSD Core Center for Acute Kidney Injury Research Pre-Clinical Studies of AKI lists: UAB-UCSD Core Center for Acute Kidney Injury Research lists: University of Alabama at Birmingham Diabetes Research Center Administrative Core Facility lists: University of Alabama at Birmingham Diabetes Research Center Animal Physiology Core Facility lists: University of Alabama at Birmingham Diabetes Research Center Bioanalytical REDOX Biology Core Facility lists: University of Alabama at Birmingham Diabetes Research Center Human Physiology Core Facility lists: University of Alabama at Birmingham Diabetes Research Center Interventions and Translation Core lists: University of Alabama at Birmingham Diabetes Research Center lists: University of Alabama at Birmingham Nutrition and Obesity Research Center Animal Models Core lists: University of Alabama at Birmingham Nutrition and Obesity Research Center Biostatistics Core lists: University of Alabama at Birmingham Nutrition and Obesity Research Center Metabolism Core lists: University of Alabama at Birmingham Nutrition and Obesity Research Center Physical Activity Core lists: University of Alabama at Birmingham Nutrition and Obesity Research Center lists: University of California San Diego - University of California Los Angeles Diabetes Research Center Genomics and Epigenetics Core Facility lists: University of California San Diego - University of California Los Angeles Diabetes Research Center Human Genetics Core Facility lists: University of California San Diego - University of California Los Angeles Diabetes Research Center Metabolic and Molecular Physiology Core Facility lists: University of California San Diego - University of California Los Angeles Diabetes Research Center lists: University of California San Diego - University of California Los Angeles Diabetes Research Center Targeted Pathway Analysis Core Facility lists: University of California San Diego - University of California Los Angeles Diabetes Research Center Transgenic and Knockout Mouse Core Facility lists: University of California San Francisco Parnassus Flow Cytometry Core Facility lists: University of California San Francisco Diabetes Research Center Lentiviral RNAi Core Facility lists: University of California San Francisco Diabetes Research Center Microscopy Core Facility lists: University of California San Francisco Diabetes Research Center Mouse Genetics Core Facility lists: University of California San Francisco Diabetes Research Center Mouse Metabolism Core lists: University of California San Francisco Diabetes Research Center lists: University of California San Francisco Nutrition and Obesity Research Center Genetics and Genomics Core lists: University of California San Francisco Nutrition and Obesity Research Center Human Metabolism Core lists: University of California San Francisco Nutrition and Obesity Research Center Mouse Metabolism and Imaging Core lists: University of California San Francisco Nutrition and Obesity Research Center lists: University of Chicago Diabetes Research and Training Center Administrative Core lists: University of Chicago Diabetes Research and Training Center Animal Models and Physiology Core lists: University of Chicago Diabetes Research and Training Center Islet Cell Biology Core lists: University of Chicago Diabetes Research and Training Center Molecular Biology and Genetics Core Laboratory lists: University of Chicago Diabetes Research and Training Center lists: University of Colorado Anschutz Medical Campus Nutrition and Obesity Research Center lists: University of Iowa Center for Gene Therapy Cell Tissue Core lists: University of Iowa Center for Gene Therapy Clinical Core lists: University of Iowa Center for Gene Therapy Comparative Pathology Core lists: University of Iowa Center for Gene Therapy lists: University of Iowa Center for Gene Therapy Vectore Core lists: University of Michigan Nutrition and Obesity Research Center Administrative Core lists: University of Michigan Nutrition and Obesity Research Center Animal Phenotyping Core lists: University of Michigan Nutrition and Obesity Research Center Human Phenotyping Core lists: University of Michigan Nutrition and Obesity Research Center Integrative Biostatistics and Informatics Core lists: University of Michigan Nutrition and Obesity Research Center Molecular Phenotyping Core lists: University of Michigan Nutrition and Obesity Research Center lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Administrative Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Animal Metabolism Phenotyping Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Biostatistics Program lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Clinical Nutrition Research Facilitation Program lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Communication for Health Applications and Interventions Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Diet and Physical Activity Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Metabolic Molecular Phenotyping Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Nutrigenetics Core lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Research Facilitation Program lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Cell Morphology Core lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Immunology Core lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Vector Core Facility lists: University of Washington Diabetes Research Center Administrative Core lists: University of Washington Diabetes Research Center Cell Function Analysis Core Facility lists: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core lists: University of Washington Diabetes Research Center Human Studies Core Facility lists: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility lists: University of Washington Diabetes Research Center lists: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core lists: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility lists: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility lists: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core lists: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource lists: Vanderbilt Diabetes Research and Training Center lists: Vanderbilt Diabetes Research and Training Center Transgenic Mouse and ES Cell Shared Resource lists: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility lists: Vanderbilt Digestive Disease Research Center Bioanalytical Mass Spectrometry and Proteomics Core lists: Vanderbilt Digestive Disease Research Center Cellular Imaging Core lists: Vanderbilt Digestive Disease Research Center Flow Cytometry Core lists: Vanderbilt Digestive Disease Research Center lists: University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core lists: University of Washington Nutrition and Obesity Research Center Administrative and Enrichment Core lists: University of Washington Nutrition and Obesity Research Center Analytic Core lists: University of Washington Nutrition and Obesity Research Center Energy Balance Core lists: Washington University Center for Diabetes Translation Research Administrative Core in Diabetes Research Core lists: University of Washington Nutrition and Obesity Research Center lists: Washington University Center for Diabetes Translation Research Dissemination and Implementation in Diabetes Research Core Facility lists: Washington University Center for Diabetes Translation Research Health Communication and Health Literacy Core Facility lists: Washington University Center for Diabetes Translation Research Health Informatics in Diabetes Research Core lists: USC Liver Transplant Program and Center for Liver Disease Analytical Metabolic Instrumentation Core lists: Washington University Center for Diabetes Translation Research Policy and Systems Science Analysis in Diabetes Research Core lists: USC Liver Transplant Program and Center for Liver Disease Cell and Tissue Imaging Core lists: Washington University Center for Diabetes Translation Research Research Partnerships with American Indian/Alaskan Native Communities Core lists: Washington University Center for Diabetes Translation Research lists: USC Liver Transplant Program and Center for Liver Disease Cell Separation and Culture Core lists: Washington University Center for Diabetes Translation Research Solutions to Diabetes in Black Americans Core lists: Washington University Digestive Diseases Research Core Center Administrative and Resource Access Core lists: USC Liver Transplant Program and Center for Liver Disease Liver Histology Core lists: USC Liver Transplant Program and Center for Liver Disease lists: Vanderbilt Center for Diabetes Translation Research Administrative Core lists: Vanderbilt Center for Diabetes Translation Research Behavioral Intervention Technologies and Services Core lists: Vanderbilt Center for Diabetes Translation Research Community Engagement Core lists: Vanderbilt Center for Diabetes Translation Research Community Outreach and Heath Disparities Core lists: Vanderbilt Center for Diabetes Translation Research lists: Washington University Digestive Diseases Research Core Center Advanced Imaging and Tissue Analysis Core lists: Vanderbilt Center for Diabetes Translation Research Translation Methods Core lists: Washington University Digestive Diseases Research Core Center Biobank Core lists: Yale Liver Center lists: Washington University Digestive Diseases Research Core Center Murine Models and Gnotobiotics Core lists: Yale Liver Center Morphology Core lists: Washington University Digestive Diseases Research Core Center lists: Yale Liver Center Clinical and Translational Core lists: Washington University School of Medicine Diabetes Research Center Cell and Tissue Imaging Core lists: Yale Liver Center Cellular and Molecular Physiology Core lists: Washington University School of Medicine Diabetes Research Center Diabetes Models Phenotyping Core Facility lists: Yale Liver Center Administrative Core lists: Washington University School of Medicine Diabetes Research Center Translational Diagnostics Core lists: Yale Diabetes Research Center lists: Washington University School of Medicine Diabetes Research Center Immunology of Type 1 Diabetes Core lists: Yale Diabetes Research Center Physiology Core Facility lists: Washington University School of Medicine Diabetes Research Center Mass Spectrometry Core lists: Yale Diabetes Research Center Molecular Genetics Core lists: Yale Diabetes Research Center Molecular Core Facility lists: Washington University School of Medicine Diabetes Research Center Morphology and Metabolic Analysis Core lists: Yale Diabetes Research Center Diabetes Translational Core Facility lists: Washington University School of Medicine Diabetes Research Center lists: Washington University School of Medicine Diabetes Research Center Transgenic and ES Cell Core lists: Yale Diabetes Research Center Clinical Metabolism Core Facility lists: Yale Diabetes Research Center Cell Biology Core Facility lists: Washington University St. Louis Nutrition Obesity Research Center lists: Yale Diabetes Research Center Administrative Core Facility lists: Yale Cooperative Center of Excellence in Hematology Animal Modeling Core lists: Yale Cooperative Center of Excellence in Hematology lists: Yale Cooperative Center of Excellence in Hematology Cell Preparation and Analysis Core lists: Yale Cooperative Center of Excellence in Hematology Imaging Core lists: Harvard Digestive Disease Center lists: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology lists: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology lists: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics lists: Harvard Digestive Diseases Center Clinical Translational Research Program lists: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material lists: Hopkins Conte Digestive Diseases Basic and Translational Research Core Center lists: Hopkins Conte Digestive Diseases Basic and Translational Research Core Center Integrated Physiology Core lists: Hopkins Conte Digestive Diseases Basic and Translational Research Core Center Image Core lists: Hopkins Conte Digestive Diseases Basic and Translational Research Core Center Proteomics Core lists: Hopkins Conte Digestive Diseases Basic and Translational Research Core Center Translational Research Enhancement Core lists: UCSF Liver Center lists: UCSF Liver Center Cell Biology Core lists: UCSF Liver Center Clinical & Translational Core lists: UCSF Liver Center Immunology Core lists: UCSF Liver Center Pathology & Imaging Core lists: University of Chicago Digestive Diseases Research Core Center lists: University of Chicago Digestive Diseases Research Core Center Integrated Translational Research Core lists: University of Chicago Digestive Diseases Research Core Center Administrative Core lists: University of Chicago Digestive Diseases Research Core Center Tissue Engineering and Cell Models Core lists: University of Chicago Digestive Diseases Research Core Center Host-Microbe Core lists: University of Chicago Digestive Diseases Research Core Center Tissue and Cell Imaging Core lists: University of Michigan Center for Gastrointestinal Research lists: University of Michigan Center for Gastrointestinal Research Protein Localization, Identification and Folding Core lists: University of Michigan Center for Gastrointestinal Research In Vivo Animal and Human Studies Core lists: University of Michigan Center for Gastrointestinal Research Molecular Biology Core lists: University of Michigan Center for Gastrointestinal Research Microbiome and Metabolomics Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease lists: University of North Carolina Center for Gastrointestinal Biology and Disease Advanced Analytics Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease Biostatistics and Data Management Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease Gnotobiotic Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease Histology Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease Large Animal Models Core lists: University of North Carolina Center for Gastrointestinal Biology and Disease Microbiome Core lists: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases lists: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Molecular Pathology and Imaging Core lists: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Host-Microbial Analytic and Repository Core lists: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Genetically-Modified Mouse Core lists: University of Pennsylvania Center for Molecular Studies in Digestive and Liver Diseases Cell Culture Core lists: Joslin Diabetes Center Molecular Phenotyping and Genotyping Core lists: University of Pennsylvania Diabetes Research Center lists: Preventing Early Renal Loss in Diabetes (PERL) lists: Clinical Trials in Organ Transplantation in Children (CTOT-C) lists: Clinical Trials in Organ Transplantation (CTOT) lists: Stanford Diabetes Research Center lists: Monogenic Diabetes Registry lists: Chronic Prostatitis Collaborative Research Network Clinical Trial- Alfuzosin lists: National Glycohemoglobin Standardization Program lists: MetaCyto lists: JOINSOLVER lists: HASP lists: NetCirChro lists: Simmune lists: ABC Bacterial Transporter Systems Database lists: Kidney Precision Medicine Project lists: ValIdated Systematic IntegratiON of epigenomic data lists: The Human BioMolecular Atlas Program lists: Prevention of Lower Urinary Tract Symptoms lists: Illuminating the Druggable Genome lists: 4D Nucleome lists: immuneXpresso lists: Multi-Disciplinary Approach to the Study of Chronic Pelvic Pain lists: Secrepedia lists: MoTrPAC Data Hub lists: Human Cell Atlas lists: PANC-DB lists: Rare and Atypical Diabetes Network lists: Diabetes Control and Complications Trial lists: Diabetes Data and Hypothesis Hub lists: Common Metabolic Diseases Knowledge Portal lists: Type 1 Diabetes Knowledge Portal lists: Sleep Disorder Knowledge Portal lists: Cardiovascular Disease Knowledge Portal lists: Cerebrovascular Disease Knowledge Portal lists: Trans-Omics for Precision Medicine (TOPMed) Program lists: All of Us lists: AI-READI is listed by: NIH Data Sharing Repositories is listed by: NIDDK Research Resources is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology is related to: MTOPS Prostate Samples Analysis Consortium is related to: Neuroscience Information Framework is related to: Diabetes Disease Portal is related to: Kidney and Urinary Pathway Knowledge Base is related to: dbMHC is related to: Islet Cell Resource Centers is related to: DGAP is related to: Nuclear Receptor Resource is related to: dkCOIN is related to: Human Biological Data Interchange is related to: National Gene Vector Biorepository is related to: Creatinine Standardization Program is related to: Glomerular Filtration Rate Calculators is related to: Congressionally Directed Medical Research Program is related to: National Kidney Disease Education Program is related to: Network of Minority Health Research Investigators is related to: National Endocrine and Metabolic Diseases Information Service is related to: Kidney and Urinary Pathway Ontology is related to: National Diabetes Information Clearinghouse is related to: Digestive Diseases Statistics for the United States is related to: Diabetes in America is related to: National Digestive Diseases Information Clearinghouse is related to: Diabetes Control and Complications Trial is related to: National Hematologic Diseases Information Service is related to: National Kidney and Urologic Diseases Information Clearinghouse is related to: Nonhuman Primate Transplantation Tolerance Cooperative Study Group is related to: Type 1 Diabetes Preclinical Testing Program is related to: Diabetes Autoantibody Standardization Program is related to: AASK Clinical Trial and Cohort Study is related to: Maryland Genetics of Interstitial Cystitis is related to: Frequent Hemodialysis Network Nocturnal Trial is related to: Mammalian Gene Collection is related to: Zebrafish Gene Collection is related to: Boston Area Community Health Survey is related to: Minimally Invasive Surgical Therapies Treatment Consortium for Benign Prostatic Hyperplasia is related to: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study is related to: Complementary and Alternative Medicine for Urological Symptoms is related to: Mouse Mutagenesis Center for Developmental Defects is related to: CARDS Database is related to: ACCORD is related to: Program to Reduce Incontinence by Diet and Exercise is related to: Renal Disease Portal is related to: Renin Angiotensin System Study is related to: NIH Data Sharing Repositories is related to: Kidney Development Database is related to: GenePaint Interactive Anatomy Atlas is related to: EMAGE Gene Expression Database is related to: Gene Expression Omnibus is related to: MGnify is related to: FAIR Data Informatics Laboratory is related to: Type 1 Diabetes Knowledge Portal is related to: Polycystic Kidney Disease Research Resource Consortium has parent organization: SciCrunch has parent organization: University of California at San Diego; California; USA
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Digestive disease, Kidney disease, Diabetes, Metabolic disease, Endocrine disease, Obesity, Urologic disease, Type 1 diabetes, Type 2 diabetes |
NIDDK U24 DK097771 |
PMID:26393351 |
Free, Freely available |
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nlx_153866, r3d100012845 |
http://scicrunch.org/dknet, https://doi.org/10.17616/R31NJMEL |
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SCR_001606 |
National Institute of Diabetes and Digestive and Kidney Disease Information Network, NIDDK Information Network, DKnet, NIDDKInformation Network |
2026-09-03 04:44:57 |
21 |
PDB Validation Server
Resource Report
Resource Website
50+ mentions
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PDB Validation Server (RRID:SCR_018135)
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service resource, software application, software resource, standalone software
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Software tool for checking data before submitting to wwPDB. Stand alone validation server. Service designed to help to check model and experimental files prior starting data deposition.
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Data validation, wwPDB data submission, data deposition
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is related to: Worldwide Protein Data Bank (wwPDB)
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Restricted |
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https://validate-rcsb-2.wwpdb.org/ |
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SCR_018135 |
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2026-09-03 05:01:04 |
57 |
PDBe - Protein Data Bank in Europe
Resource Report
Resource Website
50+ mentions
|
PDBe - Protein Data Bank in Europe (RRID:SCR_004312)
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PDBe
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data or information resource, data repository, database, service resource, storage service resource
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The European resource for the collection, organization and dissemination of data on biological macromolecular structures. In collaboration with the other worldwide Protein Data Bank (wwPDB) partners - the Research Collaboratory for Structural Bioinformatics (RCSB) and BioMagResBank (BMRB) in the USA and the Protein Data Bank of Japan (PDBj) - they work to collate, maintain and provide access to the global repository of macromolecular structure data. The main objectives of the work at PDBe are: * to provide an integrated resource of high-quality macromolecular structures and related data and make it available to the biomedical community via intuitive user interfaces. * to maintain in-house expertise in all the major structure-determination techniques (X-ray, NMR and EM) in order to stay abreast of technical and methodological developments in these fields, and to work with the community on issues of mutual interest (such as data representation, harvesting, formats and standards, or validation of structural data). * to provide high-quality deposition and annotation facilities for structural data as one of the wwPDB deposition sites. Several sophisticated tools are also available for the structural analysis of macromolecules.
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x-ray, nmr, cryo-em, hybrid method, dna, protein, rna, sugar, ligand, virus, compound, fold, enzyme, 3d spatial image, structure, macromolecule, protein-protein interaction, gold standard, bio.tools
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is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: re3data.org is listed by: bio.tools is listed by: Debian is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: DNA DataBank of Japan (DDBJ) is related to: EMDataResource.org is related to: Worldwide Protein Data Bank (wwPDB) is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: DNA DataBank of Japan (DDBJ) is related to: Worldwide Protein Data Bank (wwPDB) is related to: PDBj - Protein Data Bank Japan is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) has parent organization: European Bioinformatics Institute is parent organization of: Electron Microscopy Data Bank at PDBe (MSD-EBI) works with: MOLEonline
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European Molecular Biology Laboratory; Heidelberg; Germany ; Wellcome Trust ; BBSRC ; NIH ; European Union ; MRC ; CCP4 |
PMID:21045060 PMID:21460450 PMID:19858099 |
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r3d100012791, biotools:pdbe, nlx_32372 |
https://bio.tools/pdbe, https://doi.org/10.17616/R3J226 |
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SCR_004312 |
Protein DataBank Europe, Protein DataBank in Europe, PDBe, Protein Data Bank in Europe, Protein Data Bank Europe, Macromolecular Structure Database |
2026-09-03 04:46:59 |
55 |
Proteopedia - Life in 3D
Resource Report
Resource Website
1+ mentions
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Proteopedia - Life in 3D (RRID:SCR_004647)
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Proteopedia
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data or information resource, narrative resource, wiki
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Free, collaborative 3D, interactive encyclopedia of proteins and other molecules, it collects, organizes and disseminates structural and functional knowledge about protein, RNA, DNA, and other macromolecules, and their assemblies and interactions with small molecules, in a manner that is relevant and broadly accessible to students and scientists. With a free user account, users can edit pages in Proteopedia. Click on the green links to change the 3D image or click and drag the molecules. Categories include Diseases & Related Topics, Enzymes, Gene Expression & Replication, Metabolism, Signaling & Transport, Structural Biology and Miscellaneous. Currently, Proteopedia has 93,912 articles (pages), and 2,366 registered users (May 2013). Among other pages, Proteopedia contains one page (or article) for every entry in the World Wide Protein Data Bank. Proteopedia is updated weekly with new entries shortly after they are released by the Protein Data Bank. Most of these pages, which are titled with a four-character PDB identification code, are seeded automatically to include a default view of the asymmetric unit, the abstract of the publication, green links to sites and ligands, and molecule-specific links to other viewers and databases. When you go to a random page, you nearly always get one of these automatically-seeded, PDB-code-titled pages (click Random Page in the navigation box at the upper left), because of their abundance. In addition to one article about each entry in the Protein Data Bank (PDB identification code-titled articles), there are articles titled with the name of a molecule or a subject, instead of a PDB identification code. Some of these articles that have substantial content are listed at Topic Pages, or you can browse a complete list of articles not titled with a PDB identification code. There are also articles About Macromolecular Structure.
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protein, molecule, 3d, rna, dna, structure, function, nucleic acid, biomolecule, structural annotation, 3d visualization, visualization, disease, enzyme, gene expression, replication, metabolism, signaling, transport, structural biology, 3d spatial image
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is related to: Worldwide Protein Data Bank (wwPDB)
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Divadol Foundation ; Nalvyco Foundation ; Bruce Rosen Foundation ; Jean and Julia Goldwurm Memorial Foundation ; European Union 6th Framework ISSG-CT-2007-037198; European Union 6th Framework LSHG-CT-2006-031220 |
PMID:21567857 PMID:21536137 PMID:19117028 PMID:18673581 |
Free, The community can contribute to this resource |
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nlx_64233 |
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SCR_004647 |
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2026-09-03 04:47:23 |
8 |
PDB-REDO
Resource Report
Resource Website
10+ mentions
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PDB-REDO (RRID:SCR_018936)
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data access protocol, data processing software, data repository, service resource, software application, software resource, storage service resource, web service
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Web server for macromolecular structure model optimisation and databank of optimised structure models. Focuses on automating final steps of crystallographic process: optimisation of structure model through refinement, rebuilding, and validation. Can automatically optimise most of crystallographic structure models based on input model and diffraction data. Web server works on user provided data, databank has updated versions of Protein Data Bank entries based on original experimental data that were deposited with atomic coordinates in PDB.
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Macromolecular structure, model optimization, crystallographic process, final step automating, structure model optimization, structure refinment, structure rebuilding, atomic coordinate, PDB
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uses: Refmac uses: CCP4 uses: Coot uses: YASARA is used by: YASARA works with: Worldwide Protein Data Bank (wwPDB)
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Netherlands Organization for Scientific Research |
DOI:10.1107/S2052252514009324 |
Free, Freely available |
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SCR_018936 |
PDB_REDO |
2026-09-03 04:55:25 |
35 |
Ligand Expo
Resource Report
Resource Website
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Ligand Expo (RRID:SCR_006636)
|
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data or information resource, database, resource
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An integrated data resource for finding chemical and structural information about small molecules bound to proteins and nucleic acids within the structure entries of the Protein Data Bank. Tools are provided to search the PDB dictionary for chemical components, to identify structure entries containing particular small molecules, and to download the 3D structures of the small molecule components in the PDB entry. A sketch tool is also provided for building new chemical definitions from reported PDB chemical components.
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element, fingerprint, formula, amino acid, aromatic ring, atom, bound, carbon, chemical, component, depot, ligand, molecular, molecule, nitrogen, nucleic acid, nucleotide, pharmaceutical, protein, small molecule, structure, macromolecule, model
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uses: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) uses: Worldwide Protein Data Bank (wwPDB) has parent organization: Rutgers University; New Jersey; USA has parent organization: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
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NSF ; NIGMS ; DOE ; NLM ; NCI ; NCRR ; NIBIB ; NINDS ; NIDDK |
PMID:15059838 |
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nif-0000-21237, OMICS_02751 |
http://ligand-depot.rutgers.edu/ |
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SCR_006636 |
Ligand Depot |
2026-09-03 04:48:47 |
0 |
PDBj - Protein Data Bank Japan
Resource Report
Resource Website
10+ mentions
|
PDBj - Protein Data Bank Japan (RRID:SCR_008912)
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PDBj
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data or information resource, data repository, database, service resource, storage service resource
|
PDBj (Protein Data Bank Japan) maintains a centralized PDB archive of macromolecular structures and provides integrated tools, in collaboration with the RCSB, the BMRB in USA and the PDBe in EU.
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protein, macromolecule, structure, sequence, ligand, binding site, nmr, molecule, gold standard
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is recommended by: NIDDK Information Network (dkNET) is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: Worldwide Protein Data Bank (wwPDB) is related to: PDBe - Protein Data Bank in Europe is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) has parent organization: Osaka University; Osaka; Japan
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Japan Science and Technology Agency ; NBDC - National Bioscience Database Center |
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PDB data, Text and images are free of all copyright restrictions. You can use them free of charge. When you reprint or cite them, Please also cite us as follows: Protein Data Bank Japan (PDBj) Please also see Terms of Use page. |
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nlx_151484, r3d100010910 |
https://doi.org/10.17616/R3RP75, https://doi.org/10.17616/R3RP75 |
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SCR_008912 |
PDBj, Protein Data Bank Japan |
2026-09-03 04:49:49 |
46 |
Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
Resource Report
Resource Website
10000+ mentions
|
Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) (RRID:SCR_012820)
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RCSB PDB
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data or information resource, data repository, database, service resource, storage service resource
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Collection of structural data of biological macromolecules. Database of information about 3D structures of large biological molecules, including proteins and nucleic acids. Users can perform queries on data and analyze and visualize results.
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3-dimensional, annotation, molecule, nucleic acid, protein, visualization, sequence, function, macromolecule, ligand, model, dna, x-ray crystallography, ribosome, structure, oncogene, nucleic acids, molecular structure, cryomicroscopy, gold standard, FASEB list
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is used by: Structural Genomics Consortium is used by: Ligand Expo is used by: DARC - Database for Aligned Ribosomal Complexes is used by: FireDB is used by: Protein Data Bank Bind Database is used by: Protein Data Bank Site is used by: NIF Data Federation is used by: ChannelPedia is used by: MobiDB is used by: BALBES is used by: Structural Antibody Database is used by: BioLiP is recommended by: NIDDK Information Network (dkNET) is recommended by: National Library of Medicine is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: re3data.org is affiliated with: EMDataResource.org is affiliated with: ConSurf Database is related to: pdb-data is related to: PDB2MultiGif is related to: GlyProt is related to: pdb-care is related to: pdb2linucs is related to: GlyVicinity is related to: GlyTorsion is related to: GlySeq is related to: AffinDB is related to: StatAlign is related to: Community Structure-Activity Resource is related to: Binding MOAD is related to: ConSurf Database is related to: glycosciences.de is related to: DOMINE: Database of Protein Interactions is related to: Jenalib: Jena Library of Biological Macromolecules is related to: SynSysNet is related to: EMDataResource.org is related to: PDBe - Protein Data Bank in Europe is related to: TFinDIT is related to: HOLLOW is related to: ccPDB - Compilation and Creation of datasets from PDB is related to: DOMMINO - Database Of MacroMolecular INteractiOns is related to: InterEvol database is related to: Polbase is related to: PoSSuM is related to: ProtChemSI is related to: RNA CoSSMos is related to: PDBsum is related to: Worldwide Protein Data Bank (wwPDB) is related to: canSAR is related to: CAPS Database is related to: Dockground: Benchmarks, Docoys, Templates, and other knowledge resources for DOCKING is related to: Combinatorial Extension (CE) is related to: Metalloprotein Site Database is related to: PDBj - Protein Data Bank Japan is related to: Statistical Torsional Angles Potentials of NMR Refinement Database is related to: Metalloprotein Ligand Interaction Database is related to: CARP is related to: PDBTM is related to: RNA FRABASE - RNA FRAgments search engine and dataBASE is related to: AmiGO is related to: ConsensusPathDB is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: DNA DataBank of Japan (DDBJ) is related to: FlyMine is related to: NCBI Protein Database is related to: NCBI Nucleotide is related to: FunTree is related to: IndelFR - Indel Flanking Region Database is related to: NMR Restraints Grid is related to: Enzyme Structures Database is related to: Electron Microscopy Data Bank at PDBe (MSD-EBI) is related to: Worldwide Protein Data Bank (wwPDB) is related to: DNA DataBank of Japan (DDBJ) is related to: PDBe - Protein Data Bank in Europe is related to: MINAS - Metal Ions in Nucleic AcidS is related to: PDBj - Protein Data Bank Japan has parent organization: University of California at San Diego; California; USA has parent organization: Rutgers University; New Jersey; USA is parent organization of: RCSB PDB Software Tools is parent organization of: Protein Data Bank Markup Language is parent organization of: Ligand Expo works with: CellPhoneDB
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DOE ; NIH ; NSF DBI-1338415 |
PMID:12037327 |
Public, Acknowledgement requested |
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nif-0000-00135, SCR_017379, r3d100010327 |
http://www.rcsb.org, http://www.pdb.org, |
http://www.rcsb.org/pdb/ |
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SCR_012820 |
RCSB, Research Collaboratory for Structural Bioinformatics Protein Data Bank, The Protein Data Bank, PDB, Protein Databank, RCSB Protein Data Bank, Protein Data Bank |
2026-09-03 04:52:20 |
12459 |
NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
Resource Report
Resource Website
100+ mentions
|
NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases (RRID:SCR_012895)
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NIDDK
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government granting agency
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Center with mission to conduct and support medical research and research training and to disseminate science-based information on diabetes and other endocrine and metabolic diseases. The NIDDK supports a wide range of medical research through grants to universities and other medical research institutions across the country.
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diabetes, metabolic disease, digestive, kidney, endocrine, medical research
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recommends: Cell Image Library (CIL) recommends: Biological General Repository for Interaction Datasets (BioGRID) recommends: NIDDK Central Repository recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D) recommends: Metabolomics Workbench recommends: PeptideAtlas recommends: Network Data Exchange (NDEx) recommends: Mouse Genome Informatics (MGI) recommends: Zebrafish Information Network (ZFIN) recommends: FlyBase recommends: Database of Interacting Proteins (DIP) recommends: WormBase recommends: PhysioNet recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) recommends: UniProt recommends: dbSNP recommends: DNA DataBank of Japan (DDBJ) recommends: European Nucleotide Archive (ENA) recommends: dbVar recommends: ClinicalTrials.gov recommends: European Variation Archive (EVA) recommends: MGnify recommends: Analysis, Visualization, and Informatics Lab-space (AnVIL) recommends: GenBank recommends: Gene Expression Omnibus (GEO) recommends: miRBase recommends: Database of Genomic Variants Archive (DGVa) recommends: Crystallography Open Database (COD) recommends: Coherent X-Ray Imaging Data Bank (CXIDB) recommends: Biological Magnetic Resonance Data Bank (BMRB) recommends: Worldwide Protein Data Bank (wwPDB) recommends: EMDataResource.org recommends: NCBI Assembly Archive Viewer recommends: Cambridge Crystallographic Data Centre (CCDC) recommends: Inorganic Crystal Structure Database (ICSD) recommends: Structural Biology Grid recommends: ArrayExpress recommends: GenomeRNAi recommends: NCBI database of Genotypes and Phenotypes (dbGap) recommends: Protein Circular Dichroism Data Bank (PCDDB) recommends: Electron Microscopy Data Bank at PDBe (MSD-EBI) recommends: PDBe - Protein Data Bank in Europe recommends: PubChem BioAssay recommends: Japanese Genotype-phenotype Archive (JGA) recommends: ProteomeXchange recommends: IntAct recommends: European Genome phenome Archive recommends: MetaboLights recommends: PubChem Substance recommends: The Immunology Database and Analysis Portal (ImmPort) recommends: STRENDA recommends: Kinetic Models of Biological Systems (KiMoSys) recommends: FLOWRepository recommends: Mass spectrometry Interactive Virtual Environment (MassIVE) recommends: Global Proteome Machine Database (GPM DB) recommends: Cancer Imaging Archive (TCIA) recommends: German Neuroinformatics Node (G-Node) recommends: 1000 Functional Connectomes Project recommends: ChEMBL recommends: Image Data Resource (IDR) recommends: SICAS Medical Image Repository recommends: ZENODO recommends: Dataverse Network Project recommends: NeuroMorpho.Org recommends: Mendeley Data recommends: NIMH Data Archive recommends: NIH Figshare Archive recommends: FigShare recommends: National Addiction and HIV Data Archive Program (NAHDAP) recommends: Dryad Digital Repository recommends: Open Science Framework recommends: OpenNeuro recommends: SPARC Portal lists: Mutant Mouse Resource and Research Center lists: NIDDK Research Resources is affiliated with: Cystic Fibrosis Research and Translation Centers is affiliated with: Nutrition and Obesity Research Centers is affiliated with: O'Brien Urology Centers is affiliated with: Hematology Centers is affiliated with: Polycystic Kidney Disease Research and Translation Centers is affiliated with: O'Brien Kidney Centers is affiliated with: Diabetes Research Centers is affiliated with: Digestive Disease Centers is affiliated with: Centers for Diabetes Translation Research is affiliated with: Pediatric Centers of Excellence in Nephrology is affiliated with: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study is related to: Bridging Interventional Development Gaps is related to: Polycystic Kidney Disease Research Resource Consortium has parent organization: National Institutes of Health is parent organization of: MTOPS Prostate Samples Analysis Consortium is parent organization of: Symptom Score for Benign Prostatic Hyperplasia is parent organization of: Type 1 Diabetes - Rapid Access to Intervention Development is parent organization of: National Diabetes Education Program is parent organization of: Family Investigation of Nephropathy of Diabetes is parent organization of: Frequent Hemodialysis Network Daily Trial is parent organization of: HemBase is parent organization of: NIDDK- National Institute of Diabetes and Digestive and Kidney Diseases Obesity Resources is parent organization of: dkCOIN is parent organization of: National Kidney Disease Education Program is parent organization of: Network of Minority Health Research Investigators is parent organization of: National Endocrine and Metabolic Diseases Information Service is parent organization of: National Diabetes Information Clearinghouse is parent organization of: National Digestive Diseases Information Clearinghouse is parent organization of: National Hematologic Diseases Information Service is parent organization of: National Kidney and Urologic Diseases Information Clearinghouse is parent organization of: Type 1 Diabetes Preclinical Testing Program is parent organization of: Frequent Hemodialysis Network Nocturnal Trial is parent organization of: Boston Area Community Health Survey is parent organization of: Minimally Invasive Surgical Therapies Treatment Consortium for Benign Prostatic Hyperplasia is parent organization of: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study
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Type 1 diabetes, Type 2 diabetes, Diabetes, Digestive disease, Kidney disease, Endocrine disease, Obesity, Blood disease, Liver disease, Urologic disease |
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nlx_inv_1005102 |
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SCR_012895 |
National Institute of Diabetes and Digestive and Kidney Diseases |
2026-09-03 04:51:48 |
156 |
Biological Magnetic Resonance Data Bank (BMRB)
Resource Report
Resource Website
500+ mentions
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Biological Magnetic Resonance Data Bank (BMRB) (RRID:SCR_002296)
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BioMagResBank, BMRB
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data or information resource, data repository, database, service resource, storage service resource
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Public depository that collects, annotates, archives, and disseminates important spectral and quantitative data derived from nuclear magnetic resonance spectroscopic investigations of biological macromolecules and metabolites. Provides reference information and maintains a collection of NMR pulse sequences and computer software for biomolecular NMR.
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magnetic resonance, data bank, depository, database, data repository, spectral data, quantitative data, nmr, spectroscopy, macromolecule, metabolite, metabolomics, FASEB list
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is recommended by: NIDDK Information Network (dkNET) is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: DataCite is listed by: 3DVC is listed by: re3data.org is related to: Worldwide Protein Data Bank (wwPDB) is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: Nucleic Acid Database is related to: DNA DataBank of Japan (DDBJ) is related to: PDBe - Protein Data Bank in Europe is related to: NRG-CING is related to: Worldwide Protein Data Bank (wwPDB) is related to: PDBj - Protein Data Bank Japan is related to: CCPN Data Model has parent organization: University of Wisconsin-Madison; Wisconsin; USA is parent organization of: NMR Restraints Grid
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NLM LM05799 |
PMID:18288446 PMID:17984079 PMID:12766409 PMID:36478084 |
Free, Freely available |
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r3d100010191, nif-0000-21058 |
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SCR_002296 |
BMRB, BioMagResBank, Biological Magnetic Resonance DataBank, BioMag Res Bank |
2026-09-03 04:45:21 |
790 |
DNA DataBank of Japan (DDBJ)
Resource Report
Resource Website
500+ mentions
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DNA DataBank of Japan (DDBJ) (RRID:SCR_002359)
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DDBJ
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data or information resource, data repository, database, service resource, storage service resource
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Maintains and provides archival, retrieval and analytical resources for biological information. Central DDBJ resource consists of public, open-access nucleotide sequence databases including raw sequence reads, assembly information and functional annotation. Database content is exchanged with EBI and NCBI within the framework of the International Nucleotide Sequence Database Collaboration (INSDC). In 2011, DDBJ launched two new resources: DDBJ Omics Archive and BioProject. DOR is archival database of functional genomics data generated by microarray and highly parallel new generation sequencers. Data are exchanged between the ArrayExpress at EBI and DOR in the common MAGE-TAB format. BioProject provides organizational framework to access metadata about research projects and data from projects that are deposited into different databases.
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nucleotide sequence, genome, dna, dna database, dna research, nucleotide, phylogenetics, protein, sequence, protein binding, gene expression, gene, genetics, nucleoid, genomics, protein binding, gold standard, bio.tools, FASEB list
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is recommended by: NIDDK Information Network (dkNET) is recommended by: National Library of Medicine is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is listed by: OMICtools is listed by: re3data.org is listed by: Debian is listed by: bio.tools is related to: INSDC is related to: GenBank is related to: INSDC is related to: European Nucleotide Archive (ENA) is related to: GenBank is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: Worldwide Protein Data Bank (wwPDB) is related to: Biological Magnetic Resonance Data Bank (BMRB) is related to: PDBe - Protein Data Bank in Europe is related to: PDBe - Protein Data Bank in Europe is related to: European Nucleotide Archive (ENA) is related to: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: NCBI Assembly Archive Viewer has parent organization: National Institute of Genetics; Shizuoka; Japan is parent organization of: DDBJ Omics Archive is parent organization of: BodyMap-Xs is parent organization of: DDBJ Sequence Read Archive is parent organization of: CIBEX: Center for Information Biology gene EXpression database is parent organization of: Japanese Genotype-phenotype Archive (JGA)
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Japanese Ministry of Education Culture Sports Science and Technology MEXT |
PMID:26578571 PMID:25477381 |
Free, Freely available, |
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OMICS_01644, biotools:ddbj, nif-0000-02740, r3d100010218 |
https://bio.tools/ddbj, https://doi.org/10.17616/R3M01R |
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SCR_002359 |
DNA DataBank of Japan (DDBJ), DNA DataBank of Japan, DDBJ, DNA Data Bank of Japan, DDBJ - DNA Data Bank of Japan |
2026-09-03 04:45:24 |
709 |
Structural Antibody Database
Resource Report
Resource Website
10+ mentions
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Structural Antibody Database (RRID:SCR_022096)
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SAbDab
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data or information resource, database
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Database containing all antibody structures available in the PDB, annotated and presented in consistent fashion.Each structure is annotated with number of properties including experimental details, antibody nomenclature (e.g. heavy-light pairings), curated affinity data and sequence annotations. You can use the database to inspect individual structures, create and download datasets for analysis, search the database for structures with similar sequences to your query, monitor the known structural repetoire of antibodies.
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antibody structure, annotated structure, Protein Data Bank
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uses: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) is related to: Therapeutic Structural Antibody Database is related to: Worldwide Protein Data Bank (wwPDB)
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Engineering and Physical Sciences Research Council ; Roche GmbH ; UCB Pharma |
DOI:10.1093/nar/gkt1043 |
Free, Freely available |
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SCR_022096 |
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2026-09-03 05:03:22 |
40 |
NRG-CING
Resource Report
Resource Website
1+ mentions
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NRG-CING (RRID:SCR_006079)
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NRG-CING
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data or information resource, database
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NRG-CING presents a complete validation report for all 9,000+ wwPDB NMR entries including remediated experimental data such as chemical shifts from BMRB and restraints from NRG . These CING reports are compiled from internal analyses and those by CCPN, DSSP, PROCHECK-NMR/Aqua, ShiftX, Talos+, Vasco, Wattos, and WHAT_CHECK. The NRG-CING website is a collection of CING reports that has been pre-calculated for all PDB files solved by NMR. (See website for more information on CING.) In case the underlying experimental data is available, these have been cleaned up and made syntactically and semantically correct and homogeneous. For many macromolecular NMR ensembles from the Protein Data Bank (PDB) the experiment-based restraint lists used in the structure calculation are accessible, while other experimental data, mainly chemical shift values, are often available from the BioMagResBank. Assessment of the quality of the structural result is paramount to their usage and a combined, integrated repository of both input data and structural results greatly facilitates such an analysis. In addition, the accuracy and precision of the coordinates in these macromolecular NMR ensembles can be improved by recalculations using the available experimental data and present-day software with improved protocols and force fields. Such efforts, however, generally fail on over half of all deposited structures due to the syntactic and semantic heterogeneity of the data and the wide variety of formats used for their deposition. We have combined the cleaned-up restraints information from the NMR Restraints Grid (NRG) database with available chemical shifts from the BioMagResBank in the weekly updated NRG-CING database. Eleven programs, in addition to CING itself, have been included in the NRG-CING production pipeline to arrive at validation reports that list for each entry the potential inconsistencies between the coordinates and the available restraint and chemical shift data. The longitudinal validation of this data yielded a set of indicators that can be used to judge the quality of every macromolecular structure solved with NMR. The cleaned up NMR experimental datasets and the validation reports are freely available.
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macromolecular structure, nmr, macromolecule, restraint, chemical shift, validation report, validation, bio.tools
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is listed by: Debian is listed by: bio.tools is related to: Worldwide Protein Data Bank (wwPDB) is related to: NMR Restraints Grid is related to: Biological Magnetic Resonance Data Bank (BMRB) has parent organization: Radboud University; Nijmegen; The Netherlands
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Netherlands Organization for Scientific Research (NWO) 700.55.443; Netherlands Bioinformatics Centre (NBIC) ; EU FP6 LSHG-CT-2005-018988; EU FP6 LHSG-CT-2004-512092; EU FP7 261572; Brussels Institute for Research and Innovation BB2B 2010-1-12; NLM LM05799 |
PMID:22139937 |
Free |
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nlx_151486, biotools:nrg-cing |
https://bio.tools/nrg-cing |
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SCR_006079 |
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2026-09-03 05:02:06 |
1 |