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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
VectorBase
 
Resource Report
Resource Website
500+ mentions
VectorBase (RRID:SCR_005917) VectorBase storage service resource, data repository, service resource, database, data or information resource Bioinformatics Resource Center for invertebrate vectors. Provides web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of biowarfare or bioterrorism or causing emerging or re-emerging diseases. blast, clustalw, hmmer, vector, genomics, genome, sequence, population, insecticide resistance, annotation, microarray, gene expression, anatomy, pathogen, human, transcript, transcriptome, protein, proteome, mitochondria sequence, bioinformatics resource center, pathogen, arthropoda, vector control, ontology, software, source code, mitochondrial sequence, data analysis service, image collection, FASEB list is recommended by: National Library of Medicine
is listed by: re3data.org
is related to: Clustal W2
is related to: AnoBase: An Anopheles database
is related to: Hmmer
has parent organization: European Bioinformatics Institute
has parent organization: University of Notre Dame; Indiana; USA
NIAID ;
Evimalar network of excellence 242095;
INFRAVEC 228421;
European Union
PMID:22135296
PMID:19028744
PMID:18262474
PMID:18237287
PMID:17145709
Restricted nif-0000-03624, r3d100010880 https://doi.org/10.17616/R3CK6B SCR_005917 VectorBase - Bioinformatics Resource for Invertebrate Vectors of Human Pathogens, VectorBase, vector base 2026-08-04 09:41:28 835
National Library of Medicine
 
Resource Report
Resource Website
100+ mentions
National Library of Medicine (RRID:SCR_011446) NLM government granting agency NLM collects, organizes, and makes available biomedical science information to scientists, health professionals, and the public. The Library's Web-based databases, including PubMed/Medline and MedlinePlus, are used extensively around the world. NLM conducts and supports research in biomedical communications; creates information resources for molecular biology, biotechnology, toxicology, and environmental health; and provides grant and contract support for training, medical library resources, and biomedical informatics and communications research. Celebrating its 175th anniversary in 2011, the National Library of Medicine (NLM), in Bethesda, Maryland, is a part of the National Institutes of Health, U.S. Department of Health and Human Services (HHS). Since its founding in 1836 as the library of the U.S. Army Surgeon General, NLM has played a pivotal role in translating biomedical research into practice. It is the world's largest biomedical library and the developer of electronic information services that deliver trillions of bytes of data to millions of users every day. Scientists, health professionals, and the public in the United States and around the globe search the Library's online information resources more than 1 billion times each year. The Library is open to all and has many services and resources for scientists, health professionals, historians, and the general public. NLM has over 17 million books, journals, manuscripts, audiovisuals, and other forms of medical information on its shelves, making it the largest health-science library in the world. In today's increasingly digital world, NLM carries out its mission of enabling biomedical research, supporting health care and public health, and promoting healthy behavior by: * Acquiring, organizing, and preserving the world's scholarly biomedical literature; * Providing access to biomedical and health information across the country in partnership with the 5,800-member National Network of Libraries of Medicine (NN/LM); * Serving as a leading global resource for building, curating and providing sophisticated access to molecular biology and genomic information, including those from the Human Genome Project and NIH Common Fund; * Creating high-quality information services relevant to toxicology and environmental health, health services research, and public health; * Conducting research and development on biomedical communications systems, methods, technologies, and networks and information dissemination and utilization among health professionals, patients, and the general public; * Funding advanced biomedical informatics research and serving as the primary supporter of pre- and post-doctoral research training in biomedical informatics at 18 U.S. universities. is used by: DisGeNET
recommends: Brain Image Library
recommends: Data Archive BRAIN Initiative
recommends: OpenNeuro
recommends: Brain Observatory Storage Service and Database (BossDB)
recommends: CRCNS
recommends: NCBI database of Genotypes and Phenotypes (dbGap)
recommends: NIMH Data Archive
recommends: ENCODE
recommends: Genotype-Tissue Expression
recommends: HMP Data Analysis and Coordination Center
recommends: Illuminating the Druggable Genome
recommends: Kids First Data Resource Portal
recommends: HMS LINCS Database
recommends: Metabolomics Workbench
recommends: Patient-Reported Outcomes Measurement Information System
recommends: Cancer Nanotechnology Laboratory (caNanoLab)
recommends: Cancer Imaging Archive (TCIA)
recommends: Network Data Exchange (NDEx)
recommends: eyeGENE
recommends: National Eye Institute (NEI) Commons
recommends: National Sleep Research Resource (NSRR)
recommends: CardioVascular Research Grid (CVRG)
recommends: AMP-AD Knowledge Portal
recommends: National Archive of Computerized Data on Aging (NACDA)
recommends: National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS)
recommends: Immune Tolerance Network TrialShare
recommends: The Immunology Database and Analysis Portal (ImmPort)
recommends: VectorBase
recommends: Virus Pathogen Resource (ViPR)
recommends: LONI Image and Data Archive
recommends: NeuroImaging Tools and Resources Collaboratory (NITRC)
recommends: Child Language Data Exchange System (CHILDES)
recommends: Data and Specimen Hub (NICHD DASH)
recommends: National Children's Study (NCS) Archive
recommends: PhonBank
recommends: Archive of Data on Disability to Enable Policy (ADDEP)
recommends: National Addiction and HIV Data Archive Program (NAHDAP)
recommends: Neuroscience Information Framework
recommends: National Institute on Drug Abuse Center for Genetic Studies
recommends: NIDA Data Share
recommends: AphasiaBank
recommends: FluencyBank
recommends: NIDDK Central Repository
recommends: NIDDK Information Network (dkNET)
recommends: Nuclear Receptor Signaling Atlas
recommends: Chemical Effects in Biological Systems (CEBS)
recommends: Cell Image Library (CIL)
recommends: PhysioNet
recommends: Transporter Classification Database
recommends: Biological General Repository for Interaction Datasets (BioGRID)
recommends: Federal Interagency Traumatic Brain Injury Research Informatics System
recommends: NeuroMorpho.Org
recommends: Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR)
recommends: The NINDS Human Cell and Data Repository (NHCDR)
recommends: ClinicalTrials.gov
recommends: dbSNP
recommends: dbVar
recommends: GenBank
recommends: Gene Expression Omnibus (GEO)
recommends: NCBI Sequence Read Archive (SRA)
recommends: 1000 Functional Connectomes Project
recommends: exRNA Atlas
recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D)
recommends: PeptideAtlas
recommends: Zebrafish Information Network (ZFIN)
recommends: FlyBase
recommends: Database of Interacting Proteins (DIP)
recommends: Mouse Genome Informatics (MGI)
recommends: UniProt
recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
recommends: European Nucleotide Archive (ENA)
recommends: Analysis, Visualization, and Informatics Lab-space (AnVIL)
recommends: DNA DataBank of Japan (DDBJ)
recommends: UniProtKB
recommends: SPARC Portal
is related to: CureHunter
is related to: Entrez
has parent organization: National Institutes of Health
is parent organization of: MalariaWorld
is parent organization of: GenNav
is parent organization of: NIH Common Data Element Repository
is parent organization of: MEDLINE
is parent organization of: ClinicalTrials.gov
is parent organization of: Developmental and Reproductive Toxicology Database
is parent organization of: Directory of Health Organizations Online
is parent organization of: Haz-Map: Occupational Exposure to Hazardous Agents
is parent organization of: Hazardous Substances Data Bank
is parent organization of: Drug Information Portal
is parent organization of: NIH Data Sharing Repositories
is parent organization of: MeSH
is parent organization of: Unified Medical Language System
is parent organization of: NCBI
is parent organization of: MedlinePlus
is parent organization of: RxNorm
is parent organization of: Bibliography on Alternatives to the Use of Live Vertebrates in Biomedical Research and Testing
is parent organization of: Chemical Carcinogenesis Research Information System
is parent organization of: International Toxicity Estimates for Risk
is parent organization of: BLAST Assembled RefSeq Genomes
is parent organization of: Cross-Sectional and Longitudinal Aging Study
is parent organization of: OrbitProject
is parent organization of: Household Products Database
is parent organization of: Entrez Utilities
is parent organization of: Epidemiology of Chronic Disease in the Oldest Old
nlx_inv_1005117 SCR_011446 U.S. National Library of Medicine 2026-08-01 12:04:09 391
Clustal W2
 
Resource Report
Resource Website
5000+ mentions
Clustal W2 (RRID:SCR_002909) data processing software, alignment software, software resource, software application, image analysis software, service resource THIS RESOURCE IS NO LONGER IN SERVICE, documented on January 19, 2022. Command line version of multiple sequence alignment program Clustal for DNA or proteins. Alignment is progressive and considers sequence redundancy. No longer being maintained. Please consider using Clustal Omega instead which accepts nucleic acid or protein sequences in multiple sequence formats NBRF/PIR, EMBL/UniProt, Pearson (FASTA), GDE, ALN/ClustalW, GCG/MSF, RSF. multiple, sequence, alignment, cladogram, phylogram, evolution, phylogenetic, tree, protein, nucleic, acid, bio.tools is listed by: Debian
is listed by: bio.tools
is listed by: OMICtools
is listed by: SoftCite
is related to: Clustal Omega
is related to: UniProt
is related to: Clustal Omega
is related to: VectorBase
is related to: TopoSNP
is related to: Clustal 2
has parent organization: European Bioinformatics Institute
has parent organization: University College Dublin; Dublin; Ireland
Science Foundation Ireland PMID:17846036
PMID:20439314
DOI:10.1093/bioinformatics/btm404
THIS RESOURCE IS NO LONGER IN SERVICE OMICS_02562, nif-0000-30076 http://www.ch.embnet.org/software/ClustalW.html, https://sources.debian.org/src/clustalx/ http://www.ebi.ac.uk/tools/clustalw/ SCR_002909 European Bioinformatics Institute - ClustalW2 2026-08-04 09:40:46 7830
European Bioinformatics Institute
 
Resource Report
Resource Website
1000+ mentions
European Bioinformatics Institute (RRID:SCR_004727) EMBL-EBI institution Non-profit academic organization for research and services in bioinformatics. Provides freely available data from life science experiments, performs basic research in computational biology, and offers user training programme, manages databases of biological data including nucleic acid, protein sequences, and macromolecular structures. Part of EMBL. organization, academic, bioinformatics, research, service, data, computational, biology, training, database, DNA, protein is used by: Blueprint Epigenome
is listed by: re3data.org
is related to: AgedBrainSYSBIO
is related to: ProteomeXchange
is related to: Open PHACTS
is related to: RHEA
is related to: TraCeR
is related to: 3D-Beacons
is related to: RNAcentral
has parent organization: European Molecular Biology Laboratory
is parent organization of: CoGenT++
is parent organization of: ENA Sequence Version Archive
is parent organization of: Reaper - Demultiplexing trimming and filtering sequencing data
is parent organization of: PeakAnalyzer
is parent organization of: Tally
is parent organization of: Clustal Omega
is parent organization of: Biocatalogue - The Life Science Web Services Registry
is parent organization of: Experimental Network for Functional Integration: A European Network of Excellence for Data Integration and Systems Biology
is parent organization of: The Alternatve Splicing Database
is parent organization of: BioModels
is parent organization of: CHEBI
is parent organization of: MAGE
is parent organization of: Ensembl
is parent organization of: MIAME
is parent organization of: UniProt
is parent organization of: Ligand-Gated Ion Channel Database
is parent organization of: EBI Genomes
is parent organization of: IMEx - The International Molecular Exchange Consortium
is parent organization of: Toolbox at the European Bioinformatics Institute
is parent organization of: Clustal W2
is parent organization of: ArrayExpress
is parent organization of: IMGT/HLA
is parent organization of: IntEnz- Integrated relational Enzyme database
is parent organization of: IPD - Immuno Polymorphism Database
is parent organization of: IPI
is parent organization of: MicroArray and Gene Expression Markup Language
is parent organization of: DaliLite Pairwise comparison of protein structures
is parent organization of: Chemical Information Ontology
is parent organization of: PANDIT : Protein and Associated Nucleotide Domains with Inferred Trees
is parent organization of: Proteomics Identifications (PRIDE)
is parent organization of: Software Ontology
is parent organization of: FSSP - Families of Structurally Similar Proteins
is parent organization of: Experimental Factor Ontology
is parent organization of: Identifiers.org
is parent organization of: HipSci
is parent organization of: ProteomeXchange
is parent organization of: Taxonomy
is parent organization of: PDBe - Protein Data Bank in Europe
is parent organization of: EBI Dbfetch
is parent organization of: ProFunc
is parent organization of: WSDbfetch (SOAP)
is parent organization of: QuickGO
is parent organization of: SAS - Sequence Annotated by Structure
is parent organization of: UniProt DAS
is parent organization of: UniParc at the EBI
is parent organization of: Patent Abstracts
is parent organization of: BioSample Database at EBI
is parent organization of: Database of Genomic Variants Archive (DGVa)
is parent organization of: European Genome phenome Archive
is parent organization of: UniSave
is parent organization of: ArchSchema
is parent organization of: UniRef at the EBI
is parent organization of: EBIMed
is parent organization of: Kraken
is parent organization of: SIMBioMS
is parent organization of: Expression Profiler
is parent organization of: Whatizit
is parent organization of: InterProScan
is parent organization of: VectorBase
is parent organization of: DRCAT Resource Catalogue
is parent organization of: FunTree
is parent organization of: CREATE
is parent organization of: BioMedBridges
is parent organization of: PSICQUIC Registry
is parent organization of: PDBsum
is parent organization of: European Nucleotide Archive (ENA)
is parent organization of: DrugPort
is parent organization of: Ontology Lookup Service
is parent organization of: EDAM Ontology
is parent organization of: InterPro
is parent organization of: MIRIAM Resources
is parent organization of: EB-eye Search
is parent organization of: SBO
is parent organization of: Ensembl Genomes
is parent organization of: NeuronVisio
is parent organization of: IntAct
is parent organization of: WSsas - Web Service for the SAS tool
is parent organization of: Enzyme Structures Database
is parent organization of: EMBOSS CpGPlot/CpGReport/Isochore
is parent organization of: PaperMaker
is parent organization of: CluSTr
is parent organization of: Genome Reviews
is parent organization of: GOA
is parent organization of: Integr8 : Access to complete genomes and proteomes
is parent organization of: IPD-ESTDAB- The European Searchable Tumour Line Database
is parent organization of: IPD-HPA - Human Platelet Antigens
is parent organization of: IPD-KIR - Killer-cell Immunoglobulin-like Receptors
is parent organization of: IPD-MHC- Major Histocompatibility Complex
is parent organization of: HilbertVis
is parent organization of: Gene Expression Atlas
is parent organization of: Parasite genome databases and genome research resources
is parent organization of: Alternative Exon Database
is parent organization of: AltExtron Database
is parent organization of: Patent Data Resources
is parent organization of: Pompep
is parent organization of: Mouse finder
is parent organization of: Gene Regulation Ontology
is parent organization of: CiteXplore literature searching
is parent organization of: MaxSprout
is parent organization of: SRS
is parent organization of: MicroCosm Targets
is parent organization of: Kalign
is parent organization of: MUSCLE
is parent organization of: FASTA
is parent organization of: WU-BLAST
is parent organization of: Oases
is parent organization of: HTS Mappers
is parent organization of: CRAM
is parent organization of: CSA - Catalytic Site Atlas
is parent organization of: ArrayExpress (R)
is parent organization of: WiggleTools
is parent organization of: vsn
is parent organization of: rlsim
is parent organization of: ISA Infrastructure for Managing Experimental Metadata
is parent organization of: BioMart Project
is parent organization of: BioPerl
is parent organization of: BioJS
is parent organization of: EMDataResource.org
is parent organization of: HTqPCR
is parent organization of: Reactome
is parent organization of: Europe PubMed Central
is parent organization of: h5vc
is parent organization of: LexGrid
is parent organization of: Consensus CDS
is parent organization of: 1000 Genomes: A Deep Catalog of Human Genetic Variation
is parent organization of: OrChem
is parent organization of: Orphanet Rare Disease Ontology
is parent organization of: Reflect
is parent organization of: BioLayout Express 3D
is parent organization of: Virtual Fly Brain
is parent organization of: GeneWise
is parent organization of: PhenoMeNal
is parent organization of: Ensembl Metazoa
is parent organization of: Velvet
EMBL member states ;
European Union ;
NIH ;
Wellcome Trust ;
UK Research Councils ;
Industry Programme partners ;
BBSRC
grid.225360.0, Wikidata: Q1341845, ISNI: 0000 0000 9709 7726, nlx_72386 https://ror.org/02catss52 SCR_004727 EBI, European Molecular Biology Laboratory - European Bioinformatics Institute 2026-08-01 12:02:44 3696
University of Notre Dame; Indiana; USA
 
Resource Report
Resource Website
1+ mentions
University of Notre Dame; Indiana; USA (RRID:SCR_006191) university, institution is parent organization of: VectorBase
is parent organization of: %MinMax
is parent organization of: University of Notre Dame Integrated Imaging Core Facility
is parent organization of: University of Notre Dame ND Biophysics Instrumentation Core Facility
is parent organization of: Notre Dame Genomics and Bioinformatics Core Facility
is parent organization of: Notre Dame Freimann Life Science Center Core Facility
is parent organization of: University of Notre Dame Keck Center for Transgene Research Core Facility
is parent organization of: Notre Dame University Magnetic Resonance Research Center Core Facility
is parent organization of: Notre Dame University Mass Spectrometry and Proteomics Core Facility
SCR_006191 ND 2026-08-03 09:32:55 6
Hmmer
 
Resource Report
Resource Website
5000+ mentions
Hmmer (RRID:SCR_005305) HMMER data analysis service, data processing software, data analysis software, analysis service resource, software resource, software application, production service resource, service resource Tool for searching sequence databases for homologs of protein sequences, and for making protein sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs). Compared to BLAST, FASTA, and other sequence alignment and database search tools based on older scoring methodology, HMMER aims to be significantly more accurate and more able to detect remote homologs because of the strength of its underlying mathematical models. In the past, this strength came at significant computational expense, but in the new HMMER3 project, HMMER is now essentially as fast as BLAST. homolog, protein sequence, source code, FASEB list is used by: Mantis
is listed by: OMICtools
is listed by: Genetic Analysis Software
is listed by: Debian
is listed by: SoftCite
is related to: VectorBase
has parent organization: Janelia Research
Howard Hughes Medical Institute PMID:21593126
DOI:10.1093/bioinformatics/14.9.755
OMICS_00996, nlx_144358 https://sources.debian.org/src/hmmer/ SCR_005305 HMMER - biosequence analysis using profile hidden Markov models 2026-08-04 09:41:20 8774
re3data.org
 
Resource Report
Resource Website
50+ mentions
re3data.org (RRID:SCR_006782) re3data.org registry, database, data or information resource Global registry of research data repositories from all academic disciplines that allows the easy identification of appropriate research data repositories, both for data producers and users. Information icons display principal attributes of a repository that can be used for multi-faceted searches. Repository operators can suggest their infrastructures to be listed via a simple application form. A repository is indexed when the minimum requirements are met, i.e. mode of access to the data and repository, as well as the terms of use. vocabulary, registry, metadata standard, data sharing, FASEB list lists: Academic Seismic Portal at UTIG
lists: National Addiction and HIV Data Archive Program (NAHDAP)
lists: Alaska Climate Research Center
lists: MINT
lists: Internet Archive
lists: MatrixDB
lists: Animal QTLdb
lists: MPIDB
lists: BeetleBase
lists: Conserved Domain Database
lists: NeuroMorpho.Org
lists: Marine Geoscience Data System
lists: Cell Centered Database
lists: dbMHC
lists: Human Mortality Database
lists: UniProt
lists: Ligand-Gated Ion Channel Database
lists: EcoGene
lists: NCBI Genome
lists: ESTHER
lists: Genomes Online Database
lists: Gramene
lists: American FactFinder
lists: Human Proteinpedia
lists: IMGT/HLA
lists: Influenza Virus Resource
lists: DOE Joint Genome Institute
lists: MetaCrop
lists: ISPS Data Archive
lists: MorphBank
lists: miRBase
lists: Inter-university Consortium for Political and Social Research (ICPSR)
lists: Mouse Phenome Database (MPD)
lists: MorphoBank
lists: dbVar
lists: Open Science Framework
lists: TalkBank
lists: Nucleic Acid Database
lists: NCBI Taxonomy
lists: NCBI Protein Database
lists: PHI-base
lists: Alberta Geological Survey
lists: Protein Clusters
lists: Reactome
lists: Cell Image Library (CIL)
lists: eyeMoviePedia
lists: ALLBUS - German General Social Survey
lists: TPA
lists: Agency for Healthcare Research and Quality
lists: Alaska Satellite Facility
lists: Current German Weather Stations
lists: NCBI Structure
lists: BOLD
lists: PDBe - Protein Data Bank in Europe
lists: FishBase
lists: Nucleotide database
lists: NCBI BioSystems Database
lists: SGD
lists: Data.gov
lists: RHEA
lists: European Bioinformatics Institute
lists: NCBI Probe
lists: NCBI Nucleotide
lists: Database of Genomic Variants Archive (DGVa)
lists: NCBI Popset
lists: Whole Brain Atlas
lists: EMAGE Gene Expression Database
lists: Limited Access Datasets From NIMH Clinical Trials
lists: Tree of Life Web Project
lists: TreeBASE
lists: UCSC Genome Browser
lists: UniPROBE
lists: Crystallography Open Database (COD)
lists: National Archive of Computerized Data on Aging (NACDA)
lists: EOL - Encyclopedia of Life
lists: VectorBase
lists: caArray
lists: NCBI Epigenomics
lists: GWAS Central
lists: QTL Archive
lists: Proteome Commons
lists: XNAT Central
lists: 4TU.Datacentrum
lists: Amazon Web Services Public Data Sets
lists: ChemSpider
lists: DataStaR
lists: Rat Genome Database (RGD)
lists: Atlas of Living Australia
lists: Electron Microscopy Data Bank at PDBe (MSD-EBI)
lists: Phytozome
lists: FlyBase
lists: MaizeGDB
lists: Tuberculosis Database
lists: InterPro
lists: UNAVCO
lists: The Human Protein Atlas
lists: InnateDB
lists: UniSTS
lists: Launchpad
lists: Surveillance Epidemiology and End Results
lists: FAOSTAT
lists: Adult Blood Lead Epidemiology and Surveillance Interactive Database
lists: HIstome: The Histone Infobase
lists: HPRD - Human Protein Reference Database
lists: Biological General Repository for Interaction Datasets (BioGRID)
lists: INFEVERS
lists: Reciprocal Net
lists: Africa Centre for Health and Population Studies
lists: BeeBase
lists: Biodiversity Heritage Library
lists: Databrary
lists: ACADIS Gateway
lists: ACEpepDB
lists: AIMS Data Centre
lists: ALADDIN
lists: ASTER
lists: Access to Archival Databases
lists: AidData
lists: Alaska Ocean Observing System
lists: J. Craig Venter Institute
lists: Wellcome Trust Sanger Institute; Hinxton; United Kingdom
lists: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
lists: myExperiment
lists: BioModels
lists: Addgene
lists: Antarctic and Southern Ocean Data Portal
lists: OpenTopography
lists: National Snow and Ice Data Center
lists: Biological Magnetic Resonance Data Bank (BMRB)
lists: dbSNP
lists: Ensembl
lists: DNA DataBank of Japan (DDBJ)
lists: Entrez Gene
lists: Zebrafish Information Network (ZFIN)
lists: GitHub
lists: DrugBank
lists: NCBI database of Genotypes and Phenotypes (dbGap)
lists: Gene Expression Nervous System Atlas
lists: SumsDB
lists: GenBank
lists: GermOnline
lists: HGNC
lists: Greengenes
lists: Neuroscience Information Framework
lists: HomoloGene
lists: ArrayExpress
lists: JASPAR
lists: WormBase
lists: Database of Interacting Proteins (DIP)
lists: EMDataResource.org
lists: ResearchCompendia
lists: Proteomics Identifications (PRIDE)
lists: RefSeq
lists: FAIRsharing
lists: PubChem
lists: FigShare
lists: UniGene
lists: NIMH Data Archive
lists: TAIR
lists: NCBI BioProject
lists: SMD
lists: OpenNeuro
lists: SoyBase
lists: Beta Cell Biology Consortium
lists: Biomedical Informatics Research Network
lists: Dryad Digital Repository
lists: Atlantic Canada Conservation Data Centre
lists: Agri-environmental Research Data Repository
lists: Australian Antarctic Data Centre
lists: Antibody Registry
lists: Mouse Genome Informatics (MGI)
lists: European Nucleotide Archive (ENA)
lists: NIDDK Central Repository
lists: GigaScience
lists: PeptideAtlas
lists: 1000 Genomes: A Deep Catalog of Human Genetic Variation
lists: IntAct
lists: fMRI Data Center
lists: Gene Expression Omnibus
lists: Data and Specimen Hub (NICHD DASH)
lists: NIDA Data Share
lists: The NINDS Human Cell and Data Repository (NHCDR)
lists: Microphysiology Systems Database
lists: Dataverse Network Project
lists: Mendeley
lists: Vivli
lists: Metabolomics Workbench
lists: Qualitative Data Repository
lists: Protocols.io
lists: ZENODO
lists: STRENDA
lists: Code Ocean
lists: Brain Image Library
lists: German Collection of Microorganisms and Cell Cultures
lists: INPTDAT
lists: DataONE
lists: GBIF - Global Biodiversity Information Facility
lists: Lamont-Doherty Core Repository
lists: CaltechDATA
lists: Synapse
lists: Incorporated Research Institutions for Seismology
lists: Cancer Imaging Archive (TCIA)
lists: Mendeley Data
lists: UK Data Archive
lists: GigaDB
lists: PhysioNet
lists: Project Data Sphere
lists: Influenza Research Database (IRD)
lists: Simtk.org
lists: ResearchGate
lists: Virus Pathogen Resource (ViPR)
lists: Cambridge Structural Data Base
lists: 4TU.ResearchData
lists: Aperta Turkey Open Archive
lists: Polar Data Catalogue
lists: Arch
lists: Australian Data Archive
lists: Australian Ocean Data Network
lists: Barbara A. Mikulski Archive for Space Telescopes
lists: Aston Data Explorer
lists: Birkbeck Research Data
lists: B2SHARE Eudat
lists: BioHeritage National Science Challenge Data Repository
lists: Bolin Centre Database
lists: Brown Digital Repository
is listed by: FORCE11
is related to: U.S. Census Bureau
is related to: Rat Genome Database (RGD)
is related to: ResearchCompendia
has parent organization: Humboldt University of Berlin; Berlin; Germany
has parent organization: Karlsruhe Institute of Technology; Karlsruhe; Germany
DFG The community can contribute to this resource nlx_152589 SCR_006782 Registry of Research Data Repositories, re3data.org: Registry of Research Data Repositories, re3data 2026-08-04 09:41:40 76
AnoBase: An Anopheles database
 
Resource Report
Resource Website
1+ mentions
AnoBase: An Anopheles database (RRID:SCR_008166) database, data or information resource THIS RESOURCE IS NO LONGER IN SERVICE. Documented on November 22, 2023. A database containing genomic/biological information on anopheline mosquitoes, with an emphasis on Anopheles gambiae, the world''''s most important malaria vector. AnoBase is an integrated, relational database of basic biological and genetic data on anopheline species, with a particular emphasis on Anopheles gambiae. It has been designed as an information source and research support tool for the broad vector biology community. Although AnoBase is not a primary genomic database that develops and provides tools to access the genome of the malaria mosquito, it nevertheless contains several sections that offer data of genomic interest such as in situ hybridization images, an integrated gene tool and direct online access to AnoXcel, the proteomic database of An. gambiae. Moreover, AnoBase also contains information on non-gambiae mosquito species and a novel section on studies related to insecticide resistance. gene, genetic, anopheles gambiae, anopheline, biological, biology, community, genomic, in-situ hybridization, insecticide, invertebrate databases, malaria, mosquito, proteomic, specie, vector, image is related to: VectorBase
has parent organization: Foundation for Research and Technology-Hellas; Heraklion; Greece
is parent organization of: Malaria Ontology
NIAID THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-21031 http://www.anobase.org/ SCR_008166 AnoBase 2026-08-04 09:42:06 2

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  1. Neuroscience Information Framework Resources

    Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.

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