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URL: http://www.ebi.ac.uk/thornton-srv/databases/profunc/index.html
Proper Citation: ProFunc (RRID:SCR_004450)
Description: The ProFunc server had been developed to help identify the likely biochemical function of a protein from its three-dimensional structure. It uses both sequence- and structure-based methods including fold matching, residue conservation, surface cleft analysis, and functional 3D templates, to identify both the protein''''s likely active site and possible homologues in the PDB. Often, where one method fails to provide any functional insight another may be more helpful. You can submit your own structure, analyze an existing PDB entry, or retrieve the results of a previously submitted run. The files are usually stored for about 6 months before being deleted. However, they are stored on a partition that is not backed up; so, in principle, they could disappear at any time.
Abbreviations: ProFunc
Synonyms: ProFunc - prediction of protein function from 3D structure, ProFunc: Analysis of a protein''''s 3D structure to help identify its likely biochemical function
Resource Type: service resource, analysis service resource, production service resource, data analysis service
Defining Citation: PMID:15980588, PMID:16019027
Keywords: gold standard
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