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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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MAGMA Resource Report Resource Website 100+ mentions |
MAGMA (RRID:SCR_005757) | MAGMA | software resource | Software that utilizes a multiobjective evolutionary algorithm for genetic mapping. It is based on a the ECJ evolutionary software package written by Sean Luke and includes the Strength Pareto Evoluationary Algorithm Version 2 changes for multiobjective analysis. The code runs on any platform with Java Version 2. A genetic mapping project, typically implemented during a search for genes responsible for a disease, requires the acquisition of a set of data from each of a large number of individuals. This data set includes the values of multiple genetic markers. These genetic markers occur at discrete positions along the genome, which is a collection of one or more linear chromosomes. Typing the value of a marker in an individual carries a cost; one seeks to minimize the number of markers typed without excessively jeopardizing the probability of detecting an association between a marker and a disease phenotype. MAGMA is a project which employ''s a multiobjective evolutionary algorithm to solve this problem. | gene, genetic mapping, algorithm, genomics, single nucleotide polymorphism, population study, haplotype-block elucidation, java | has parent organization: SourceForge | Juvenile Diabetes Research Foundation | PMID:12875658 | Open unspecified license | nlx_149220 | SCR_005757 | SciCrunch Registry | Multiobjective Analyzer for Genetic Marker Acquisition, MAGMA: Multiobjective Analyzer for Genetic Marker Acquisition | 2026-09-26 02:13:56 | 495 | |||||
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SourceForge Resource Report Resource Website 500+ mentions |
SourceForge (RRID:SCR_004365) | data access protocol, software resource, web service | Web based service that offers software developers centralized online location to control and manage free and open source software projects. Open source software tool and business public software platform. | software, platform, tool, resource, catalog, community, project, , FASEB list |
lists: Clinical Measurement Ontology lists: Measurement Method Ontology lists: CHEBI lists: Fly Taxonomy lists: Software Ontology lists: MIAPA lists: Comparative Data Analysis Ontology lists: SOAPfuse lists: MetAssign lists: Avalon Cheminformatics Toolkit lists: FMAToolbox lists: Multivariate Analysis of Transcript Splicing is related to: Wisconsin White Matter Hyperintensities Segmentation Toolbox is related to: BVA import/export EEGLAB plugin is parent organization of: SP-Designer is parent organization of: BlackOPs is parent organization of: UTR is parent organization of: CG-Pipeline is parent organization of: iMethy is parent organization of: dprimer is parent organization of: Dissect is parent organization of: AbMining ToolBox is parent organization of: siRNArules is parent organization of: MysiRNA-designer is parent organization of: D-Tailor is parent organization of: BioLemmatizer is parent organization of: exomeSuite is parent organization of: Sequence Read Format is parent organization of: BLASTPLOT is parent organization of: Magnolya is parent organization of: GMATo is parent organization of: GemSIM is parent organization of: Grinder is parent organization of: MS-Spectre is parent organization of: Quant is parent organization of: GProX is parent organization of: PeptideProphet is parent organization of: ProteinProphet is parent organization of: OMSSAPercolator is parent organization of: Flicker is parent organization of: LIPAGE is parent organization of: fqzcomp is parent organization of: ArrayPlex is parent organization of: cuteNMR is parent organization of: Jnomics is parent organization of: JMolDraw is parent organization of: CGAP-Align is parent organization of: Kinannote is parent organization of: ParseCNV is parent organization of: riboPicker is parent organization of: GENSENG is parent organization of: AS-Peak is parent organization of: FunctSNP is parent organization of: Micro-Analyzer is parent organization of: Reprever is parent organization of: POPBAM is parent organization of: pyQPCR is parent organization of: miRprimer is parent organization of: BAIT is parent organization of: fourSig is parent organization of: MaryGold is parent organization of: TOPPAS is parent organization of: Ishtar is parent organization of: mzMatch is parent organization of: ViReMa is parent organization of: VariantMaster is parent organization of: NGS-Cleaner is parent organization of: drFAST is parent organization of: PhenoFam is parent organization of: GMcloser is parent organization of: Bycom is parent organization of: NGS tools for the novice is parent organization of: Opera is parent organization of: SRMA is parent organization of: DeNovoGear is parent organization of: TriageTools is parent organization of: detecttd is parent organization of: FastUniq is parent organization of: FineSplice is parent organization of: AutoAssemblyD is parent organization of: CUDA-EC is parent organization of: qips is parent organization of: SparseAssembler is parent organization of: ParticleCall is parent organization of: skewer is parent organization of: CrossMap is parent organization of: Breakway is parent organization of: MUMmerGPU is parent organization of: PHACCS is parent organization of: ChIP-seq is parent organization of: Mutascope is parent organization of: metabnorm is parent organization of: KAnalyze is parent organization of: NGSrich is parent organization of: Mugsy is parent organization of: BACContigEditor is parent organization of: HAPLOPAINTER is parent organization of: PennSeq is parent organization of: DNACLUST is parent organization of: ReCount - A multi-experiment resource of analysis-ready RNA-seq gene count datasets is parent organization of: Ray is parent organization of: openADAM is parent organization of: DMET-Analyzer is parent organization of: SNVer is parent organization of: Cake is parent organization of: Matchprot is parent organization of: NIDB - Neuroinformatics Database is parent organization of: RUbioSeq is parent organization of: SCRalyze is parent organization of: TARQUIN is parent organization of: Rainbow is parent organization of: GLProbs is parent organization of: ANDES is parent organization of: Batch Oligo Selection Script is parent organization of: rDock is parent organization of: Biologic Stylus is parent organization of: MIPE is parent organization of: FAS-DPD is parent organization of: mrsFAST is parent organization of: mrCaNaVaR is parent organization of: SaskPrimerFS is parent organization of: XORRO is parent organization of: SALT is parent organization of: Gemi is parent organization of: Vertebrate Trait Ontology is parent organization of: Xournal is parent organization of: Metabolomics Standards Initiative is parent organization of: SpliCQ is parent organization of: ORFprimer is parent organization of: JCVI Primer Designer is parent organization of: deFuse is parent organization of: Amplicon is parent organization of: PrimerSeq is parent organization of: Niftilib is parent organization of: GEOSS is parent organization of: GEPAT is parent organization of: Jmol is parent organization of: SeqExpress is parent organization of: InsertionMapper is parent organization of: HLASeq is parent organization of: BamView is parent organization of: CB-Commander is parent organization of: Vanator is parent organization of: SnoopCGH is parent organization of: PASHA is parent organization of: USeq is parent organization of: SVMerge is parent organization of: Pythia is parent organization of: Bambus is parent organization of: cortex var is parent organization of: UnoSeq is parent organization of: VFS is parent organization of: ASOoViR is parent organization of: AnnTools is parent organization of: COVA is parent organization of: GESND is parent organization of: ORMAN is parent organization of: SnpEff is parent organization of: HIVCD is parent organization of: QuRe is parent organization of: inGAP is parent organization of: SPLITREAD is parent organization of: (at)Note is parent organization of: CoverageCalculator is parent organization of: MolBioLib is parent organization of: Ergatis is parent organization of: SolexaQA is parent organization of: CUSHAW2-GPU is parent organization of: Maq is parent organization of: mrFAST is parent organization of: TreQ is parent organization of: Hadoop-BAM is parent organization of: MACE is parent organization of: Sybil is parent organization of: cancergrid-tma is parent organization of: SAMtools Text Alignment Viewer is parent organization of: Staden Package is parent organization of: Maqview is parent organization of: NGSView is parent organization of: go-moose is parent organization of: netClass is parent organization of: ESTScan is parent organization of: MAGMA is parent organization of: ALCHEMY is parent organization of: Brain Networks is parent organization of: Neurofitter is parent organization of: dna-bison is parent organization of: BLESS is parent organization of: Object-Oriented Development Interface for NMR is parent organization of: HTQC is parent organization of: OBO Tracker: Plant Ontology (PO) TERM requests is parent organization of: COHCAP is parent organization of: Picard is parent organization of: SpliceGrapher is parent organization of: Blox is parent organization of: DMEAS is parent organization of: Samscope is parent organization of: GARM is parent organization of: fitGCP is parent organization of: POLGUI - Matlab Polhemus Interface is parent organization of: Next-gen Sequencing Scaffolding Tool is parent organization of: GASiC is parent organization of: Qudaich is parent organization of: Virmid is parent organization of: BIGpre is parent organization of: bioNerDS is parent organization of: mubiomics is parent organization of: GBS barcode splitter is parent organization of: Adverse Event Ontology is parent organization of: TaxoAssignement is parent organization of: QUASR is parent organization of: simhtsd is parent organization of: BMDExpress is parent organization of: HIA 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organization of: MFPaQ is parent organization of: ProteoWizard is parent organization of: Maltcms is parent organization of: multiplierz is parent organization of: ADTEx is parent organization of: MatNMR is parent organization of: GSim is parent organization of: RASP is parent organization of: TE-locate is parent organization of: FIGG is parent organization of: DIYA is parent organization of: MrBayes is parent organization of: Fastphylo is parent organization of: PhyloTreePruner is parent organization of: SNP ratio test is parent organization of: FingerID is parent organization of: proTRAC is parent organization of: HopeMap is parent organization of: SketchEl is parent organization of: GLARE is parent organization of: MCDL is parent organization of: NetMODE is parent organization of: Toxtree is parent organization of: Toxmatch is parent organization of: Viewmol is parent organization of: QuteMol is parent organization of: PBJelly is parent organization of: SAM format is parent organization of: COBRApy is parent organization of: ORCA is parent organization of: Bionotate is parent organization of: Knowtator is parent organization of: MMAX2 is parent organization of: LAITOR is parent organization of: Connecting Overlapped Pair-End reads is parent organization of: iPapers is parent organization of: PyPedal is parent organization of: miRPlant is parent organization of: Simulate PCR is parent organization of: Scalpel is parent organization of: SAT-Assembler is parent organization of: diCal-IBD is parent organization of: MToolBox is parent organization of: ReviSTER is parent organization of: Ionwinze is parent organization of: VirVarSeq is parent organization of: GeneVenn is parent organization of: Pegasus-fus is parent organization of: GenoSIGHT is parent organization of: ISDTool is parent organization of: cnvCapSeq is parent organization of: EC2KEGG is parent organization of: eALPS is parent organization of: LDx is parent organization of: PLEK is parent organization of: NAIL is parent organization of: iMSAT is parent organization of: PrimerProspector is parent organization of: NESmapper is parent organization of: DHAC is parent organization of: Musite is parent organization of: PhosphoSiteAnalyzer is parent organization of: xMSanalyzer is parent organization of: A5-miseq is parent organization of: CNV Workshop is parent organization of: EXCAVATOR-tool is parent organization of: Krona is parent organization of: Trowel is parent organization of: Acacia is parent organization of: miRDeep* is parent organization of: CloudAligner is parent organization of: ProbeSelect is parent organization of: SeqGenome Browser is parent organization of: KungFq is parent organization of: SAMZIP is parent organization of: EDNA is parent organization of: MSAProbs is parent organization of: Onco-STS is parent organization of: ChIPOTle Peak Finder is parent organization of: NxGview is parent organization of: BSmapper is parent organization of: Flexbar is parent organization of: QcReads is parent organization of: HECTOR is parent organization of: SHREC is parent organization of: hiCtools is parent organization of: Swift is parent organization of: TraceTuner is parent organization of: seqMINER is parent organization of: MIREAP is parent organization of: miRDeep-P is parent organization of: ncPRO-seq is parent organization of: vcf2MSAT is parent organization of: SAMMate is parent organization of: FishingCNV is parent organization of: NGSpeAnalysis is parent organization of: Bamformatics is parent organization of: IBDLD is parent organization of: HATS is parent organization of: SolSNP is parent organization of: Trinity is parent organization of: SNPTools is parent organization of: MendelScan is parent organization of: LoFreq is parent organization of: GENE-counter is parent organization of: RNA CoMPASS is parent organization of: VCAKE is parent organization of: LOCAS is parent organization of: Contrail is parent organization of: AMOS is parent organization of: VDJFasta is parent organization of: RDP FrameBot is parent organization of: Celera Genome Browser is parent organization of: AutoMap is parent organization of: DSP is parent organization of: Neuroimaging in Python is parent organization of: cnvHiTSeq is parent organization of: Easyfig is parent organization of: bisReadMapper is parent organization of: palfinder is parent organization of: sam comp is parent organization of: CongrPE is parent organization of: CallSim is parent organization of: Tuxedo is parent organization of: SAPAS is parent organization of: iso2mesh is parent organization of: Telescoper is parent organization of: HeurAA is parent organization of: CoNIFER is parent organization of: DynamicProg is parent organization of: SOCS is parent organization of: BEADS is parent organization of: miRSeqNovel is parent organization of: PIA is parent organization of: ChimeraSlayer is parent organization of: RDXplorer is parent organization of: SeqTRACS is parent organization of: Crossbow is parent organization of: Hanalyzer is parent organization of: QUAST is parent organization of: Drosophila anatomy and development ontologies is parent organization of: Diffusion Tensor Imaging ToolKit is parent organization of: OLORIN is parent organization of: NovelSeq is parent organization of: SobekCM is parent organization of: NEMO Ontology is parent organization of: Mindtouch DekiWiki is parent organization of: MGED Ontology is parent organization of: SPInDel is parent organization of: LMAT is parent organization of: VariationHunter is parent organization of: G-BLASTN is parent organization of: T-lex is parent organization of: SeqAnt is parent organization of: PAZAR is parent organization of: CUSHAW is parent organization of: TMAJ is parent organization of: Manatee is parent organization of: HOLLOW is parent organization of: OWL API is parent organization of: Bioelectromagnetism Matlab Toolbox is parent organization of: Predictive Networks is parent organization of: Centroid Trajectory Analysis is parent organization of: PowerMap is parent organization of: BarraCUDA is parent organization of: FastSemSim is parent organization of: Wisconsin White Matter Hyperintensities Segmentation Toolbox is parent organization of: ArrayOligoSelector hosts: Batman-Seq |
nlx_38463 | SCR_004365 | SciCrunch Registry | 2026-09-26 02:17:07 | 923 |
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