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ReCount - A multi-experiment resource of analysis-ready RNA-seq gene count datasets (RRID:SCR_001774)Copy Citation Copied
URL: http://bowtie-bio.sourceforge.net/recount/
Proper Citation: ReCount - A multi-experiment resource of analysis-ready RNA-seq gene count datasets (RRID:SCR_001774)
Description: RNA-seq gene count datasets built using the raw data from 18 different studies. The raw sequencing data (.fastq files) were processed with Myrna to obtain tables of counts for each gene. For ease of statistical analysis, they combined each count table with sample phenotype data to form an R object of class ExpressionSet. The count tables, ExpressionSets, and phenotype tables are ready to use and freely available. By taking care of several preprocessing steps and combining many datasets into one easily-accessible website, we make finding and analyzing RNA-seq data considerably more straightforward.
Abbreviations: ReCount
Resource Type: data or information resource, data set
Defining Citation: PMID:22087737
Keywords: rna-seq, gene count, gene, phenotype, r
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Johns Hopkins Bloomberg School of Public Health; Maryland; USA |
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