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URL: https://pegasus.readthedocs.io/en/stable
Proper Citation: Pegasus (RRID:SCR_021645)
Description: Software package for massive single cell data processing. Enables analysis of million scale single cell RNA-seq data and is functionally comparable to Seurat and SCANPY. Command line tool, Python package and base for Cloud based analysis workflows. Supports variety of analysis tasks, such as cell and gene level quality control, highly variable gene selection, dimension reduction, kNN graph building, data integration, clustering, differential expression analysis and putative cell type annotation.
Synonyms: Pegasus for Single Cell Analysis, Pegasus tool for massive single cell data processing
Resource Type: software resource, software application, software toolkit, data analysis software, data processing software
Keywords: massive single cell data processing, million scale single cell RNA-seq data, gene level quality control, highly variable gene selection, dimension reduction
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