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URL: https://cumulus.readthedocs.io/en/stable
Proper Citation: Cumulus (RRID:SCR_021644)
Description: Software tool as cloud based single cell genomics and spatial transcriptomics data analysis framework that is scalable to massive amounts of data and able to process variety of data types. Consists of cloud analysis workflow, Python analysis package and visualization application. Supports analysis of single-cell RNA-seq, CITE-seq, Perturb-seq, single-cell ATAC-seq, single-cell immune repertoire and spatial transcriptomics data.
Resource Type: data analysis software, software resource, data processing software, software application
Defining Citation: DOI:10.1038/s41592-020-0905-x
Keywords: Single cell genomics, spatial transcriptomics, single-cell RNA-seq, CITE-seq, Perturb-seq, single-cell ATAC-seq, single-cell immune repertoire, data
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