Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SL305 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034091 | Caenorhabditis elegans | spe-26(eb8) IV/nT1 [unc-?(n754) let-?] (IV;V). | Heterozygotes are Unc and segregate Unc and WT which are Spe (they lay only oocytes on the plate). Maintain by picking Unc. | WBGene00004972(spe-26) | WBGene00004972(spe-26) | WB-STRAIN:WBStrain00034091 | WormBase (WB) | WB | available | PMID:7744249 | WB-STRAIN:SL305, CGC_SL305 | 2026-09-05 04:53:09 | 0 | ||
|
SL438 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034092 | Caenorhabditis elegans | spe-9(eb19) I; him-5(e1490) V; ebEx126. | ebEx126 [YAC Y47H9 [spe-9(+)] + rol-6(su1006)]. Pick Rollers to maintain. eb19 is a spe-9 non-conditional mutant. | WBGene00001864(him-5)|WBGene00004963(spe-9) | WBGene00001864(him-5), WBGene00004963(spe-9) | WB-STRAIN:WBStrain00034092 | WormBase (WB) | WB | available | PMID:37453427 PMID:37453426 |
WB-STRAIN:SL438, CGC_SL438 | 2026-09-05 04:53:09 | 0 | ||
|
SL753 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034096 | Caenorhabditis elegans | spe-39(tx12) V/nT1 [unc-?(n754) let-?] (IV;V). | Heterozygote are fertile and Unc. spe-39(tx12) homozygotes are self-sterile due to defects in spermatogenesis.|"WBStrain provided so WBPaper00060545 paper added based on AFP_Strain data." | WBGene00004975(spe-39) | WBGene00004975(spe-39) | WB-STRAIN:WBStrain00034096 | WormBase (WB) | WB | available | WB-STRAIN:SL753, CGC_SL753 | 2026-09-05 04:53:10 | 0 | |||
|
SD1976 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034054 | Caenorhabditis elegans | unc-119(ed3) III; gaEx228. | gaEx228 [Y62H9A.6::Dendra2 + Cbr-unc-119(+)]. Pick non-Unc to maintain. Translational Y62H9A.6::GFP reporter expressed in the uterine lumen of adult hermaphrodites. Reference: Zimmerman S, et al. 2015.|"gaEx228 [Y62H9A.6::Dendra2 + Cbr-unc-119]. Pick non-Unc to maintain. Translational Y62H9A.6::GFP reporter expressed in the uterine lumen of adult hermaphrodites. Reference: Zimmerman S, et al. 2015." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00034054 | WormBase (WB) | WB | available | WB-STRAIN:SD1976, CGC_SD1976 | 2026-09-05 04:53:09 | 0 | |||
|
SD1983 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034056 | Caenorhabditis elegans | unc-119(ed3) III; gaEx227. | gaEx227 [C08F11.11::Dendra2 + Cbr-unc-119(+)]. Pick non-Unc to maintain. Translational C08F11.11::GFP reporter expressed in the uterine lumen of adult hermaphrodites. Reference: Zimmerman S, et al. 2015.|"gaEx227 [C08F11.11::Dendra2 + Cbr-unc-119]. Pick non-Unc to maintain. Translational C08F11.11::GFP reporter expressed in the uterine lumen of adult hermaphrodites. Reference: Zimmerman S, et al. 2015." | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00034056 | WormBase (WB) | WB | available | WB-STRAIN:SD1983, CGC_SD1983 | 2026-09-05 04:53:09 | 0 | |||
|
SD1989 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034057 | Caenorhabditis elegans | rde-1(ne300) V; gaIs290. | gaIs290 [elt-2::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. RNAi-resistant. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Recombineered fosmid was integrated by biolistic bombardment. References: Sarov, M, et al. Nat Methods (2006) 10:839-44. Mann F, et al. PLoS. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org) | WBGene00004323(rde-1) | WBGene00004323(rde-1) | WB-STRAIN:WBStrain00034057 | WormBase (WB) | WB | available | WB-STRAIN:SD1989, CGC_SD1989 | 2026-09-05 04:53:09 | 0 | |||
|
SF1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034058 | Caenorhabditis elegans | odc-1(pc13::Tc1) V. | Made by PCR screen of Tc1 transposon insertion library. odc-1(pc13::Tc1) has a partial deletion of the Tc1 element. Phenotypically it has 35% reduction in brood size compared to the WT N2 Bristol strain.|"Made_by: Ron Plasterk" | WBGene00003844(odc-1) | WBGene00003844(odc-1) | WB-STRAIN:WBStrain00034058 | WormBase (WB) | WB | available | PMID:7498733 PMID:37787376 PMID:38575858 PMID:38808663 |
WB-STRAIN:SF1, CGC_SF1 | 2026-09-05 04:53:09 | 0 | ||
|
SJ6 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034060 | Caenorhabditis elegans | zcIs4 V; irg-7(zc6) X. | zcIs4 [hsp-4::GFP] V. The identity of upr-1 remains unknown. Animals containing the zc6 mutation can be detected in an hsp-4::GFP background by following the bright green tails under fluorescence microscopy. | WBGene00018237(irg-7) | WBGene00018237(irg-7) | WB-STRAIN:WBStrain00034060 | WormBase (WB) | WB | available | WB-STRAIN:SJ6, CGC_SJ6 | 2026-09-05 04:53:09 | 0 | |||
|
SJ30 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00034062 | Caenorhabditis elegans | ire-1(zc14) II; zcIs4 V. | zcIs4 [hsp-4::GFP] V. Animals contain a missense mutation (G739R) in the kinase domain of ire-1. They are unable to induce hsp-4(BiP0 in response to tumincamycin, or heat shock. | WBGene00002147(ire-1) | WBGene00002147(ire-1) | WB-STRAIN:WBStrain00034062 | WormBase (WB) | WB | available | PMID:37500972 | WB-STRAIN:SJ30, CGC_SJ30 | 2026-09-05 04:53:09 | 6 | ||
|
SJ4005 Resource Report Resource Website 10+ mentions |
RRID:WB-STRAIN:WBStrain00034065 | Caenorhabditis elegans | zcIs4 [hsp-4::GFP] | Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"Mutagen:Psoralen and UV"|"Mutagen:Psoralin and UV"|"Supplementary_genotype zcIs4 [Phsp-4GFP]"|"WBStrain mapped, WBPaper00059596 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00059950 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00060638 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061409 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061527 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061562 added based on AFP_Strain data."|"WBStrain provided so WBPaper00059545 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00060410 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00060420 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061805 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061870 paper added based on AFP_Strain data."|"zcIs4 [hsp-4::GFP] V. The hsp-4::GFP reporter integrated within the cluster of LG V. Animals express low levels of GFP under basal conditions. However, expression in the gut and hypodermis can increase in response to tunicamycin treatment or heat shock." | WB-STRAIN:WBStrain00034065 | WormBase (WB) | WB | available | PMID:32550360 PMID:31735670 PMID:32294300 PMID:32306217 PMID:32640191 PMID:32600387 PMID:33006972 PMID:32958476 PMID:33216250 PMID:33319173 PMID:33542359 PMID:33883621 PMID:34172445 PMID:34407398 PMID:34467850 PMID:35045336 PMID:35602005 PMID:36774344 PMID:37103980 PMID:37416472 PMID:37500972 PMID:37684042 PMID:38100354 PMID:38253120 PMID:38403745 PMID:38361361 PMID:38852157 PMID:38983916 PMID:39235964 PMID:39418305 PMID:39436952 |
WB-STRAIN:SJ4005, CGC_SJ4005 | 2026-09-05 04:53:09 | 25 | ||||
|
SJ4058 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00034066 | Caenorhabditis elegans | zcIs9 V. | Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"WBStrain mapped, WBPaper00061409 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061527 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061562 added based on AFP_Strain data."|"WBStrain provided so WBPaper00061870 paper added based on AFP_Strain data."|"zcIs9 [hsp-60::GFP + lin-15(+)]. Stable transgenic line with low basal GFP expression, mainly in the tail, observed from L1 to adult. Induced by perturbations of mitochondrial folding environment." | WBGene00002025(hsp-60) | WBGene00002025(hsp-60) | WB-STRAIN:WBStrain00034066 | WormBase (WB) | WB | available | PMID:31735670 PMID:33319173 PMID:33542359 PMID:34172445 PMID:34467850 PMID:35045336 PMID:36774344 PMID:39169052 |
WB-STRAIN:SJ4058, CGC_SJ4058 | 2026-09-05 04:53:09 | 7 | ||
|
SJ4063 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034067 | Caenorhabditis elegans | zcIs8 X. | Mutagen:UV/TMP|"zcIs8 contains [abu-1::GFP]." | WB-STRAIN:WBStrain00034067 | WormBase (WB) | WB | available | WB-STRAIN:SJ4063, CGC_SJ4063 | 2026-09-05 04:53:09 | 0 | |||||
|
SL1138 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00034101 | Caenorhabditis elegans | spe-42(tn1231) V/nT1 [unc-?(n754) let-? qIs50] (IV;V). | Heterozygotes are Unc and express myo-2::GFP in the pharynx. spe-42(tn1231) homozygotes are non-Unc and non-GFP. spe-42(tn1231) produces <1 self progeny at 16C and no self progeny at 25C. The Spe defect can be rescued by WT sperm. Homozygous nT1[unc-?(n754) let-? qIs50] are embryonic lethal. | WBGene00007117(spe-42) | WBGene00007117(spe-42) | WB-STRAIN:WBStrain00034101 | WormBase (WB) | WB | available | WB-STRAIN:SL1138, CGC_SL1138 | 2026-09-05 04:53:10 | 1 | |||
|
SJ4151 Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00034072 | Caenorhabditis elegans | zcIs19. | Mutagen:UV/TMP|"zcIs19 contains [ubl-5p::ubl-5::GFP]." | WBGene00006726(ubl-5) | WBGene00006726(ubl-5) | WB-STRAIN:WBStrain00034072 | WormBase (WB) | WB | available | WB-STRAIN:SJ4151, CGC_SJ4151 | 2026-09-05 04:53:09 | 1 | |||
|
SD1890 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034033 | Caenorhabditis elegans | glo-4(ok623) V; gaIs285. | gaIs285 [unc-62(7a)::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. A STOP-codon was inserted into exon 7a of unc-62 to generate an UNC-62(7b)-specific reporter. Recombineered fosmid was integrated by biolistic bombardment to produce strain OP602, which was outcrossed to produce SD1894. glo-4(ok623) causes a a partially-penetrant Dpy phenotype. References: Sarov, M, et al. Nat Methods (2006) 10:839-44. Gerstein MB, et al. Science. 2010 Dec 24;330(6012):1775-87. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org). Derived from parental strains RB811 and SD1888.|"gaIs286 [unc-62(7b)::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. A STOP-codon was inserted into exon 7a of unc-62 to generate an UNC-62(7b)-specific reporter. Recombineered fosmid was integrated by biolistic bombardment to produce strain OP602, which wa outcrossed to produce SD1894. glo-4(ok623) causes a a partially-penetrant Dpy phenotype. References: Sarov, M, et al. Nat Methods (2006) 10:839-44. Gerstein MB, et al. Science. 2010 Dec 24;330(6012):1775-87. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org). Derived from parental strains RB811 and SD1888." | WBGene00017195(glo-4) | WBGene00017195(glo-4) | WB-STRAIN:WBStrain00034033 | WormBase (WB) | WB | available | WB-STRAIN:SD1890, CGC_SD1890 | 2026-09-05 04:53:09 | 0 | |||
|
SD1891 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034034 | Caenorhabditis elegans | unc-119(ed3) III; wgIs203. | wgIs203 [nhr-76::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. Expression of transgene confirmed by GFP. Altered social behavior at 20C. References: Sarov, M, et al. Nat Methods (2006) 10:839-44. Gerstein MB, et al. Science. 2010 Dec 24;330(6012):1775-87. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org) | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00034034 | WormBase (WB) | WB | available | WB-STRAIN:SD1891, CGC_SD1891 | 2026-09-05 04:53:09 | 0 | |||
|
SD1894 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034035 | Caenorhabditis elegans | gaIs286. | gaIs286 [unc-62(7b)::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. A STOP-codon was inserted into exon 7a of unc-62 to generate an UNC-62(7b)-specific reporter. Recombineered fosmid was integrated by biolistic bombardment to produce strain OP602, which wa outcrossed to produce SD1894. References: Sarov, M, et al. Nat Methods (2006) 10:839-44. Gerstein MB, et al. Science. 2010 Dec 24;330(6012):1775-87. Strain was constructed as part of the Regulatory Element Project, part of modENCODE (URL: www.modencode.org) | WB-STRAIN:WBStrain00034035 | WormBase (WB) | WB | available | WB-STRAIN:SD1894, CGC_SD1894 | 2026-09-05 04:53:09 | 0 | |||||
|
SD1897 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034036 | Caenorhabditis elegans | glo-4(ok623) V; wgIs600. | wgIs600 [unc-62::TY1::EGFP::3xFLAG(92C12) + unc-119(+)]. TY1::EGFP::3xFLAG tag inserted in frame at C-terminus of coding sequence by recombineering. glo-4(ok623) causes a a partially-penetrant Dpy phenotype. Derived from parental strains RB811 and SD1871. | WBGene00017195(glo-4) | WBGene00017195(glo-4) | WB-STRAIN:WBStrain00034036 | WormBase (WB) | WB | available | WB-STRAIN:SD1897, CGC_SD1897 | 2026-09-05 04:53:09 | 0 | |||
|
SD1901 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034038 | Caenorhabditis elegans | unc-119(ed3) III; gaEx214. | gaEx214 [sod-3p::mCherry + aakg-2(sta2) + ucp-4p::ucp2(D. rerio) + unc-119(+)]. Reference: Sagi D & Kim SK. PLoS Genet. 2012 Jun;8(6):e1002780. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00034038 | WormBase (WB) | WB | available | WB-STRAIN:SD1901, CGC_SD1901 | 2026-09-05 04:53:09 | 0 | |||
|
SD1902 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00034039 | Caenorhabditis elegans | unc-119(ed3) III; gaEx216. | gaEx216 [sod-3p::mCherry + hsf-1(+) + lys-1p::lyz(D. rerio) + unc-119(+)]. Reference: Sagi D & Kim SK. PLoS Genet. 2012 Jun;8(6):e1002780. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00034039 | WormBase (WB) | WB | available | WB-STRAIN:SD1902, CGC_SD1902 | 2026-09-05 04:53:09 | 0 |
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
