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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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National Cancer Institute Resource Report Resource Website 100+ mentions |
National Cancer Institute (RRID:SCR_011176) | NCI | government granting agency, institution | Federal government agency for cancer research and training established in 1937. National Cancer Program is responsibility of NCI to coordinate, conduct and support research, training, health information dissemination with respect to cause, diagnosis, prevention, and treatment of cancer, rehabilitation from cancer, and continuing care of cancer patients and families of cancer patients. Supports construction of laboratories, clinics, and related facilities necessary for cancer research through award of grants. | institute, federal, government, agency, cancer, research, training, program, health, diagnosis, prevention, treatment, clinic, laboratory, grant |
is parent organization of: Cancer Gene Index is parent organization of: Biometric Research Branch: ArrayTools is parent organization of: High-Throughput GoMiner is parent organization of: DNAWorks at Helix Systems is parent organization of: Center for Cancer Research: Schiller Laboratory is parent organization of: Retroviral Tagged Cancer Gene Database is parent organization of: CGEMS is parent organization of: National Cancer Institute 3D Structure Database is parent organization of: SNP500Cancer is parent organization of: QPPD - Quantitative PCR Primer Database is parent organization of: NCI Center for Cancer Research Genomics Core Facility is parent organization of: CellMiner is parent organization of: National Cancer Institute Genomics and Pharmacology Core Facility is parent organization of: NCI SEER Cancer Stage Variable Documentation is parent organization of: NCI Division of Cancer Control and Population Sciences SEER-Medicare Comorbidity SAS Macros is parent organization of: NCI Division of Cancer Control and Population Sciences SEER-Medicare Linked Data Resource is parent organization of: NIH Center for Cancer Research Sequencing Core Facility |
https://ror.org/040gcmg81 | , Wikidata Q664846, nlx_inv_1005051, GRID grid.48336.3a ISNI 0000 0004 1936 8075, nlx_inv_1005082, Crossref Funder ID 100000054, SCR_011403 | SCR_011176 | SciCrunch Registry | 2026-10-31 12:21:24 | 353 | ||||||||
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National Institutes of Health Resource Report Resource Website 1000+ mentions |
National Institutes of Health (RRID:SCR_011417) | NIH | institution | NIH is the nations medical research agency - making important medical discoveries that improve health and save lives. The National Institutes of Health (NIH), a part of the U.S. Department of Health and Human Services, is the primary Federal agency for conducting and supporting medical research. Helping to lead the way toward important medical discoveries that improve peoples health and save lives, NIH scientists investigate ways to prevent disease as well as the causes, treatments, and even cures for common and rare diseases. NIH research impacts: * child and teen health, * men's health, * minority health, * seniors' health, * women's health, and * wellness and lifestyle issues. Composed of 27 Institutes and Centers, the NIH provides leadership and financial support to researchers in every state and throughout the world. | granting agency, US Department of Health, medical research |
uses: ReadCube uses: Scizzle is related to: All About Grants Podcast is related to: Ranking Tables of NIH Funding to US Medical Schools in 2010 is related to: DMPTool has parent organization: United States Department of Health and Human Services granting agency is parent organization of: Human Genome Project Information is parent organization of: Cross Collaboration Initiatives at the NIH is parent organization of: GEOquery is parent organization of: Trans-Institute Angiogenesis Research Program is parent organization of: Collecting Duct Database is parent organization of: NIH Office of Research Services is parent organization of: ECRbase is parent organization of: NIH Worker Training Program is parent organization of: ACME is parent organization of: NIH Division of Nutrition Research Coordination is parent organization of: Research Services Branch National Institutes of Mental Health is parent organization of: NIH VideoCasting is parent organization of: Biositemaps is parent organization of: Neurofed is parent organization of: NeuronJ: An ImageJ Plugin for Neurite Tracing and Quantification is parent organization of: General Clinical Research Centers Program is parent organization of: Office of Intramural Training and Education is parent organization of: Mutant Mouse Resource and Research Center is parent organization of: NIH Image is parent organization of: Biomedical Information Science and Technology Initiative is parent organization of: NIH NeuroBioBank is parent organization of: NIH Human Pluripotent Stem Cell Registry is parent organization of: NIH MRI Study of Normal Brain Development is parent organization of: OppNet - Basic Behavioral and Social Science Opportunity Network is parent organization of: NIH Blueprint for Neuroscience Research is parent organization of: Kidney Health Initiative is parent organization of: Office of Rare Diseases Research is parent organization of: Center for Cancer Research is parent organization of: NIH Biospecimens Interest Group is parent organization of: NIH Neuroscience Microarray Consortium is parent organization of: Genomic Datasharing is parent organization of: Knockout Mouse Project is parent organization of: NIH Office of Science Education is parent organization of: BARD is parent organization of: StemCellDB is parent organization of: Jobs(at)NIH is parent organization of: Office of Extramural Research NIH is parent organization of: Office of Behavioral and Social Sciences Research is parent organization of: Prize4Life is parent organization of: NIH Pain Consortium is parent organization of: BRAIN Initiative is parent organization of: BTRIS: NIH Biomedical Translational Research Information System is parent organization of: NIH Human Connectome Project is parent organization of: Biowulf at the NIH is parent organization of: National Institutes of Neurological Disorders and Stroke Research Programs is parent organization of: REGARDS - REasons for Geographic and Racial Differences in Stroke is parent organization of: Model Organisms for Biomedical Research is parent organization of: Deltagen and Lexicon Knockout Mice and Phenotypic Data Resource is parent organization of: Brain Computer Interface 2000 Software Package is parent organization of: Cognitive and Emotional Health Project: The Healthy Brain is parent organization of: Cancer Chromosomes is parent organization of: X-linked SCID mutation database is parent organization of: Health Research Funding is parent organization of: Know Stroke Campaign is parent organization of: Comparative Vertebrate Sequencing is parent organization of: Phylogenetic Clusters of Orthologous Groups Ranking is parent organization of: PubMatrix is parent organization of: National Institutes of Health Stem Cell Tables is parent organization of: Allergen Database for Food Safety is parent organization of: Molecular Brain: Transcription Profiles of Mouse and Human Brains is parent organization of: Genetic and Rare Diseases Information Center is parent organization of: Molecular Libraries Program is parent organization of: BMAP - Brain Molecular Anatomy Project is parent organization of: CARDS Database is parent organization of: Office of logistics and acquisition operations is parent organization of: National Centers for Biomedical Computing is parent organization of: Center for Information Technology is parent organization of: Fogarty International Center is parent organization of: Genome association studies is parent organization of: National Cancer Institute is parent organization of: National Center for Complementary and Alternative Medicine is parent organization of: National Center for Research Resources is parent organization of: National Eye Institute (NEI) Commons is parent organization of: National Heart Lung and Blood Institute is parent organization of: National Human Genome Research Institute is parent organization of: National Institute of Biomedical Imaging and Bioengineering is parent organization of: National Institute of Child Health and Human Development is parent organization of: National Institute of Environmental Health Sciences is parent organization of: National Institute of Mental Health is parent organization of: National Institute of Nursing Research is parent organization of: National Institute on Aging is parent organization of: National Institute on Alcohol Abuse and Alcoholism is parent organization of: National Institute on Drug Abuse is parent organization of: National Institute on Minority Health and Health Disparities is parent organization of: National Library of Medicine is parent organization of: NIH Clinical Center is parent organization of: NIH Roadmap is parent organization of: Superfund basic research program is parent organization of: National Institute of Arthritis and Musculoskeletal and Skin Diseases is parent organization of: National Institute of Allergy and Infectious Diseases is parent organization of: NIH Office of the Director is parent organization of: NIH Common Fund is parent organization of: National Center for Advancing Translational Sciences is parent organization of: National Institute on Deafness and Other Communication Disorders is parent organization of: Office of research facilities development and operations is parent organization of: National Institute of General Medical Sciences is parent organization of: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases is parent organization of: AIDSinfo Drug Database is parent organization of: Human Microbiome Project is parent organization of: National Institute of Neurological Disorders and Stroke is parent organization of: NIH electronic Research Materials catalogue is parent organization of: Center for Scientific Review is parent organization of: Ontology-based Knowledgebase for Human Cell Adhesion Molecules is parent organization of: Chronic Fatigue Syndrome is parent organization of: National Institute of Health Data Book is parent organization of: NIH-CIDI Lung Segmentation Tool is parent organization of: NIH Pediatric MRI Data Repository is parent organization of: DICOMConvert is parent organization of: Accelerating Medicines Partnership is parent organization of: Biospecimen Research Database |
Available to the research community | ISNI: 0000 0001 2297 5165, nlx_inv_1005116, grid.94365.3d, Wikidata: Q390551, Crossref funder ID: 100000002 | https://ror.org/01cwqze88 | SCR_011417 | SciCrunch Registry | National Institutes of Health | 2026-10-31 12:15:21 | 4594 | ||||||
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Biometric Research Branch: ArrayTools Resource Report Resource Website 1+ mentions |
Biometric Research Branch: ArrayTools (RRID:SCR_000778) | data analysis software, data processing software, data visualization software, software application, software resource, software toolkit | A software package for the visualization and statistical analysis of DNA microarray gene expression data. The tools have been developed from the R statistical system, in C and fortran programs and Java applications. They are integrated into Excel as an add-in. | visualization, statistic, analysis, dna, microarray, gene, expression, c, java, excel |
is listed by: OMICtools has parent organization: National Cancer Institute has parent organization: National Cancer Institute |
THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-30199 | SCR_000778 | SciCrunch Registry | BRB ArrayTools | 2026-10-31 12:12:42 | 6 | ||||||||
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NCI Office of Biospecimens Resource Report Resource Website 1+ mentions |
NCI Office of Biospecimens (RRID:SCR_007076) | OBBR | data or information resource, narrative resource, portal, standard specification, topical portal | The NCI Office of Biorepositories and Biospecimen Research (OBBR) was established in 2005 in recognition of the critical role that biospecimens play in cancer research. The OBBR is responsible for developing a common biorepository infrastructure that promotes resource sharing and team science, in order to facilitate multi-institutional, high throughput genomic and proteomic studies. OBBR is focused on the following objectives: * Establish biobanking as a new area of research, in order to determine the impact of various collection and processing protocols on the usefulness of biospecimens in genomic and proteomic studies * Disseminate first-generation Best Practices in order to harmonize policies and procedures of NCI-supported biorepositories * Develop future generations of biorepository best practices, based on the data generated in the biobanking research programs above * Promote professional oversight of biospecimen standards development by standards organizations * Develop new technologies for biorepository operations * Develop a biorepository accreditation program * Coordinate with the international biobanking community to harmonize policies and procedures to facilitate multi-national research | has parent organization: National Cancer Institute | NCI | nlx_29021 | SCR_007076 | SciCrunch Registry | Office of Biorepositories and Biospecimen Research, NCI OBBR, NCI Office of Biorepositories and Biospecimen Research, National Cancer Institute Office of Biorepositories and Biospecimen Research | 2026-10-31 12:14:38 | 2 | ||||||||
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Glioma Molecular Dignostic Initiatives Resource Report Resource Website 10+ mentions |
Glioma Molecular Dignostic Initiatives (RRID:SCR_003329) | GMDI | controlled vocabulary, data or information resource, data repository, narrative resource, service resource, standard specification, storage service resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 28,2023. An initiative to develop a molecular classification schema that is both clinically and biologically meaningful, based on gene expression and genomic data from tumors (Gliomas) of patients who will be prospectively followed through natural history and treatment phase of their illness. The study will also explore gene expression profiles to determine the responsiveness of the patients and correlate with discrete chromosomal abnormalities. The initiative was designed to obtain a large amount of molecular data on DNA and RNA of freshly collected tumor samples that were collected, processed and analyzed in a standardized fashion to allow for large-scale cross sample analysis. The sample collection is accompanied by careful and prospective clinical data acquisition, allowing a variety of matched molecular and clinical data permitting a wide variety of analyses. GMDI has accrued fresh frozen tumors in the retrospective phase (all from the Henry Ford Hospital, without germline DNA) and fresh frozen tumors in the prospective phase (from a variety of institutions). In addition to characterizing the samples from patients enrolled in GMDI, the microarray group has generated genomic-scale analyses of the many human and canine glioma initiating cells/glioma stem cells (GIC/GSC) lines, as well as many canine and murine normal neural stem cell (NSC) lines produced in laboratory. | molecular neuroanatomy resource, molecular data, clinical data, genomic analyses, genomics, gene, expression array, snp array, gene expression, microarray, glioma initiating cell, glioma stem cell, protein, glioma, molecular, diagnostic, dna, rna, tumor, tissue, blood, plasma, data repository |
is listed by: One Mind Biospecimen Bank Listing is related to: Repository of molecular brain neoplasia data has parent organization: National Cancer Institute |
Glioma, Brain cancer, Brain tumor | NCI | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-31950 | http://search.engrant.com/project/NxvG9G/the_glioma_molecular_diagnostic_initiative_characterizing_brain_tumor_data | SCR_003329 | SciCrunch Registry | Glioma Molecular Diagnostic Initiative: Characterizing Brain Tumor Data | 2026-10-31 12:13:22 | 20 | ||||
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Transdisciplinary Tobacco Use Research Centers Resource Report Resource Website |
Transdisciplinary Tobacco Use Research Centers (RRID:SCR_006858) | TTURC | data or information resource, disease-related portal, portal, topical portal | A transdisciplinary approach to the full spectrum of basic and applied research on tobacco use to reduce the disease burden of tobacco use, including: * Etiology of tobacco use and addiction * Impact of advertising and marketing * Prevention of tobacco use * Treatment of tobacco use and addiction * Identification of biomarkers of tobacco exposure * Identification of genes related to addiction and susceptibility to harm from tobacco Goals * Increase the number of investigators from relevant disciplines who focus on the study of tobacco use as part of transdisciplinary teams. * Generate basic research evidence to improve understanding of the etiology and natural history of tobacco use. * Produce evidence-based tobacco use interventions that can translate to the community and specific understudied or underserved populations. * Increase the number of evidence-based interventions that are novel, including the development, testing and dissemination of innovative behavioral treatments and prevention strategies based upon findings from basic research. * Train transdisciplinary investigators capable of conducting cutting-edge tobacco use research. * Increase the number of peer-reviewed publications in the areas of tobacco use, nicotine addiction, and treatment. | gene, genetic factor, addiction gene, behavioral treatment, biomarker, molecule, nicotine use disorder, prevention, psychosocial factor, smoking, smoking cessation, tobacco exposure, treatment, nicotine, prevention, tobacco, intervention | has parent organization: National Cancer Institute | Nicotine use disorder, Addiction | NCI ; NIDA ; NIAAA |
nif-0000-24133 | SCR_006858 | SciCrunch Registry | 2026-10-31 12:14:36 | 0 | |||||||
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Repository of molecular brain neoplasia data Resource Report Resource Website 1+ mentions |
Repository of molecular brain neoplasia data (RRID:SCR_004704) | REMBRANDT | analysis service resource, data analysis service, data or information resource, database, portal, production service resource, service resource, topical portal | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on April 28,2023. REMBRANDT is a data repository containing diverse types of molecular research and clinical trials data related to brain cancers, including gliomas, along with a wide variety of web-based analysis tools that readily facilitate the understanding of critical correlations among the different data types. REMBRANDT aims to be the access portal for a national molecular, genetic, and clinical database of several thousand primary brain tumors that is fully open and accessible to all investigators (including intramural and extramural researchers), as well as the public at-large. The main focus is to molecularly characterize a large number of adult and pediatric primary brain tumors and to correlate those data with extensive retrospective and prospective clinical data. Specific data types hosted here are gene expression profiles, real time PCR assays, CGH and SNP array information, sequencing data, tissue array results and images, proteomic profiles, and patients'''' response to various treatments. Clinical trials'''' information and protocols are also accessible. The data can be downloaded as raw files containing all the information gathered through the primary experiments or can be mined using the informatics support provided. This comprehensive brain tumor data portal will allow for easy ad hoc querying across multiple domains, thus allowing physician-scientists to make the right decisions during patient treatments., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | gene, genetic, cancer, glioma, tumor, clinical genomics, functional genomics, clinical trial, genomics, gene expression, chromosomal aberration, clinical data, clinical, cellular pathway, gene ontology, molecule, brain, neoplasia, brain tumor, adult, pediatric, child, adolescent, gene expression profile, real time pcr assay, cgh array, snp array, sequence, tissue array, image, proteomic profile, treatment, protocol, molecular data, oncology, data mining, copy number array, gene expression array, secretion, kinase, membrane, gene-anomaly, translational research, personalized medicine, data integration, pathway, cell, phenotype |
is related to: Gene Ontology is related to: Glioma Molecular Dignostic Initiatives has parent organization: National Cancer Institute |
Glioma, Brain cancer, Brain tumor | NCI ; NINDS |
PMID:19208739 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-00230 | SCR_004704 | SciCrunch Registry | REMBRANDT (Repository of Molecular Brain Neoplasia Data), REMBRANDT - Repository of Molecular Brain Neoplasia Data, REpository for Molecular BRAin Neoplasia DaTa (REMBRANDT) | 2026-10-31 12:13:54 | 2 | ||||
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Division of clinical sciences Resource Report Resource Website |
Division of clinical sciences (RRID:SCR_004787) | NCI, SC | government granting agency | http://www3.cancer.gov/intra/dcs/dcshome.htm | has parent organization: National Cancer Institute | nlx_inv_1005054 | SCR_004787 | SciCrunch Registry | 2026-10-31 12:13:56 | 0 | ||||||||||
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Division of cancer treatment Resource Report Resource Website |
Division of cancer treatment (RRID:SCR_004774) | NCI, CM | government granting agency | http://dctd.cancer.gov/FundingPartnerships/PAsRFAs.htm | has parent organization: National Cancer Institute | nlx_inv_1005053 | SCR_004774 | SciCrunch Registry | 2026-10-31 12:13:56 | 0 | ||||||||||
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caGWAS Resource Report Resource Website |
caGWAS (RRID:SCR_009617) | caGWAS | software resource | Too that allows researchers to integrate, query, report, and analyze significant associations between genetic variations and disease, drug response or other clinical outcomes. SNP array technologies make it possible to genotype hundreds of thousands of single nucleotide polymorphisms (SNPs) simultaneously, enabling whole genome association studies. Within the Clinical Genomic Object Model (CGOM), the caIntegrator team created a domain model for Whole Genome Association Study Analysis. CGOM-caGWAS is a A semantically annotated domain model that captures associations between Study, Study Participant, Disease, SNP Association Analysis, SNP Population Frequency and SNP annotations. caGWAS APIs and web portal provide: * a semantically annotated domain model, database schema with sample data, seasoned middleware, APIs, and web portal for GWAS data; * platform and disease agnostic CGOM-caGWAS model and associated APIs; * the opportunity for developers to customize the look and feel of their GWAS portal; * a foundation of open source technologies; * a well-tested and performance-enhanced platform, as the same software is being used to house the CGEMS data portal; * accelerated analysis of results from various biomedical studies; and * a single application through which researchers and bioinformaticians can access and analyze clinical and experimental data from a variety of data types, as caGWAS objects are part of the CGOM, which includes microarray, genomic, immunohistochemistry, imaging, and clinical data. | application, computational neuroscience, genetic association, genomic analysis, imaging genomics, java, snp, gene, software, web environment, microarray, genomic, immunohistochemistry, imaging, clinical |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: National Cancer Institute |
BSD License | nlx_155841 | http://www.nitrc.org/projects/cagwas | SCR_009617 | SciCrunch Registry | caGWAS (Cancer Genome-Wide Association Studies), Cancer Genome-Wide Association Studies, CGOM-caGWAS | 2026-10-31 12:14:59 | 0 | ||||||
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Biomedical Research Integrated Domain Group Model Resource Report Resource Website |
Biomedical Research Integrated Domain Group Model (RRID:SCR_010265) | BRIDG | controlled vocabulary, data or information resource, ontology | An instance of a Domain Analysis Model (DAM) with the goal of producing a shared view of the dynamic and static semantics for the domain of protocol-driven research and its associated regulatory artifacts. This domain of interest is further defined as: Protocol-driven research and its associated regulatory artifacts: i.e. the data, organization, resources, rules, and processes involved in the formal assessment of the utility, impact, or other pharmacological, physiological, or psychological effects of a drug, procedure, process, or device on a human, animal, or other subject or substance plus all associated regulatory artifacts required for or derived from this effort, including data specifically associated with post-marketing adverse event reporting. The Biomedical Research Integrated Domain Group (BRIDG) Model is a collaborative effort engaging stakeholders from the Clinical Data Interchange Standards Consortium (CDISC), the HL7 Regulated Clinical Research Information Management Technical Committee (RCRIM TC), the National Cancer Institute (NCI) and its Cancer Biomedical Informatics Grid (caBIG??), and the US Food and Drug Administration (FDA). Source repository: https://ncisvn.nci.nih.gov/WebSVN/listing.php?repname=bridg-model&path=%2Ftrunk%2FModel+-+OWL%2F& | owl |
is listed by: BioPortal has parent organization: National Cancer Institute |
nlx_157336 | http://www.bridgmodel.org/ | SCR_010265 | SciCrunch Registry | BRIDG Model | 2026-10-31 12:15:02 | 0 | |||||||
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Center for Cancer Research: Schiller Laboratory Resource Report Resource Website 50+ mentions |
Center for Cancer Research: Schiller Laboratory (RRID:SCR_012969) | data or information resource, laboratory portal, organization portal, portal | This is the lab portal of Dr. Schiller at the National Cancer Institue in Frederick, Germany. Keyowrds: Cancer, REsearch, Institute, Laboratory, |
has parent organization: National Cancer Institute has parent organization: National Cancer Institute |
nif-0000-30321 | SCR_012969 | SciCrunch Registry | Schiller | 2026-10-31 12:15:49 | 58 | ||||||||||
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Physician Data Query Resource Report Resource Website 1+ mentions |
Physician Data Query (RRID:SCR_006833) | PDQ | clinical trial, controlled vocabulary, data or information resource, database, ontology, people resource, registry | NCI''s comprehensive cancer database that contains summaries on a wide range of cancer topics; a registry of 8,000+ open and 19,000+ closed cancer clinical trials from around the world; a directory of professionals who provide genetics services; the NCI Dictionary of Cancer Terms, with definitions for 6,800+ cancer and medical terms; and the NCI Drug Dictionary, which has information on 2,300+ agents used in the treatment of cancer or cancer-related conditions. The PDQ cancer information summaries are peer reviewed and updated monthly by six editorial boards comprised of specialists in adult treatment, pediatric treatment, supportive care, screening and prevention, genetics, and complementary and alternative medicine. The Boards review current literature from more than 70 biomedical journals, evaluate its relevance, and synthesize it into clear summaries. Many of the summaries are also available in Spanish. | adult, pediatric, child, alternative, breast, clinical trial, colorectal, hypercalcemia, legal, lung, medicine, medullary, nausea, ovarian, pain, pathophysiology, pediatric, pharmaceutical, physician, prevention, prognosis, prostate, psychosocial, query, risk factor, screening, social, syndrome, thyroid, treatment, umls, genetics, medical, drug, peer review |
is listed by: BioPortal has parent organization: National Cancer Institute |
Cancer, Cancer-related condition | NCI | nif-0000-21318 | SCR_006833 | SciCrunch Registry | PDQ - NCI''s Comprehensive Cancer Database | 2026-10-31 12:18:26 | 2 | ||||||
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Cancer Biomedical Informatics Grid Resource Report Resource Website 10+ mentions |
Cancer Biomedical Informatics Grid (RRID:SCR_003328) | data or information resource, knowledge environment, organization portal, portal | THIS RESOURCE IS NO LONGER IN SERVICE, documented July 19, 2016. It has been integrated into the National Cancer Informatics Program (NCIP). The National Cancer Institute launched the cancer Biomedical Informatics Grid (caBIG) to create a virtual network of interconnected data, individuals, and organizations that worked together to redefine how cancer research is conducted. caBIG capabilities allowed researchers and clinicians to collaborate more effectively so that complex research questions might be asked and answered faster and more effectively. The mission of caBIG was to develop a truly collaborative information network that accelerated the discovery of new approaches for the detection, diagnosis, treatment, and prevention of cancer, ultimately improving patient outcomes. | data sharing |
is related to: caTIES - Cancer Text Information Extraction System is related to: caArray has parent organization: National Cancer Institute is parent organization of: caTRIP |
NCI | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-31949 | SCR_003328 | SciCrunch Registry | caBIG | 2026-10-31 12:19:08 | 33 | |||||||
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Mammalian Gene Collection Resource Report Resource Website 10+ mentions |
Mammalian Gene Collection (RRID:SCR_007024) | MGC | biomaterial supply resource, cell repository, material resource | NIH initiative project to provide full-length open reading frame (FL-ORF) clones for human, mouse, and rat genes, cow. MGC cDNA clones were obtained by screening of cDNA libraries, by transcript-specific RT-PCR cloning, and by DNA synthesis of cDNA inserts. All MGC sequences are deposited in GenBank and clones can be purchased from distributors of IMAGE consortium. With conclusion of MGC project in March 2009, GenBank records of MGC sequences will be frozen, without further updates. Since definition of what constitutes full-length coding region for some of genes and transcripts for which they have MGC clones will likely change in future, users planning to order MGC clones will need to monitor for these changes. Users can make use of genome browsers and gene-specific databases, such as the UCSC Genome browser, NCBI's Map Viewer, and Entrez Gene, to view relevant regions of genome (browsers) or gene-related information (Entrez Gene). | cell line, cdna, frozen, clone, vector, gene, open reading frame, sequence, expressed sequence tag, bio.tools, FASEB list |
is listed by: One Mind Biospecimen Bank Listing is listed by: bio.tools is listed by: Debian is related to: One Mind Biospecimen Bank Listing is related to: NIDDK Information Network (dkNET) is related to: ATCC is related to: GenBank is related to: Invitrogen Clones is related to: Open Biosystems is related to: Zebrafish Gene Collection has parent organization: National Cancer Institute |
NIH Blueprint for Neuroscience Research | Free, Freely available | biotools:mammalian_gene_collection, nif-0000-00195 | https://bio.tools/mammalian_gene_collection | SCR_007024 | SciCrunch Registry | Mammalian Gene Collection | 2026-10-31 12:19:11 | 46 | |||||
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Proteomic Data Commons Resource Report Resource Website 100+ mentions |
Proteomic Data Commons (RRID:SCR_018273) | PDC | analysis service resource, data or information resource, data repository, database, production service resource, service resource, storage service resource | Portal to make cancer related proteomic datasets easily accessible to public. Facilitates multiomic integration in support of precision medicine through interoperability with other resources. Developed to advance our understanding of how proteins help to shape risk, diagnosis, development, progression, and treatment of cancer. One of several repositories within NCI Cancer Research Data Commons which enables researchers to link proteomic data with other data sets (e.g., genomic and imaging data) and to submit, collect, analyze, store, and share data throughout cancer data ecosystem. PDC provides access to highly curated and standardized biospecimen, clinical, and proteomic data, intuitive interface to filter, query, search, visualize and download data and metadata. Provides common data harmonization pipeline to uniformly analyze all PDC data and provides advanced visualization of quantitative information. Cloud based (Amazon Web Services) infrastructure facilitates interoperability with AWS based data analysis tools and platforms natively. Application programming interface (API) provides cloud-agnostic data access and allows third parties to extend functionality beyond PDC. Structured workspace that serves as private user data store and also data submission portal. Distributes controlled access data, such as patient-specific protein fasta sequence databases, with dbGaP authorization and eRA Commons authentication. | Cancer, proteomic, data, precision medicine, diagnosis, treatment, analysis, biospeciment, clinical data, metadata |
is related to: Cancer Research Data Commons has parent organization: National Cancer Institute |
cancer | Restricted | SCR_018273 | SciCrunch Registry | 2026-10-31 12:16:59 | 102 | ||||||||
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caHUB Resource Report Resource Website |
caHUB (RRID:SCR_009657) | caHUB | data or information resource, narrative resource, standard specification | THIS RESOURCE IS NO LONGER IN SERVICE. Documented July 5, 2018. A national center for biospecimen science and standards to advance cancer research and treatment. It was created in response to the critical and growing need for high-quality, well-documented biospecimens for cancer research. The initiative builds on resources already developed by the NCI, including the Biospecimen Research Network and the NCI Best Practices for Biospecimen Resources, both of which were developed to address challenges around standardization of the collection and dissemination of quality biospecimens. caHUB will develop the infrastructure for collaborative biospecimen research and the production of evidence-based biospecimen standard operating procedures. | biospecimen, clinical, biomaterial supply resource, tissue |
is listed by: NIDDK Information Network (dkNET) is related to: Biorepositories and Biospecimens Research Branch has parent organization: National Cancer Institute |
Cancer | NCI ; ARRA |
THIS RESOURCE IS NO LONGER IN SERVICE | nlx_156094 | SCR_009657 | SciCrunch Registry | The Cancer Human Biobank, cancer Human Biobank | 2026-10-31 12:18:44 | 0 | |||||
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Cancer Gene Index Resource Report Resource Website 1+ mentions |
Cancer Gene Index (RRID:SCR_001117) | data or information resource, database | THIS RESOURCE IS NO LONGER IN SERVICE, documented on November 17, 2016. A database of genes that have been experimentally associated with human cancer diseases and/or pharmacological compounds, the evidence of these associations, and relevant annotations on the data. | gene, cancer, genetics, pharmacology, disease, database, data |
is listed by: OMICtools has parent organization: National Cancer Institute has parent organization: National Cancer Institute |
Cancer | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_01575 | SCR_001117 | SciCrunch Registry | 2026-10-31 12:19:45 | 2 | ||||||||
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CPTAC Resource Report Resource Website 100+ mentions |
CPTAC (RRID:SCR_017135) | consortium, data or information resource, disease-related portal, organization portal, portal, topical portal | Clinical proteomic tumor analysis consortium to systematically identify proteins that derive from alterations in cancer genomes and related biological processes, in order to understand molecular basis of cancer that is not possible through genomics and to accelerate translation of molecular findings into clinic. Operates through Proteome Characterization Centers, Proteogenomic Translational Research Centers, and Proteogenomic Data Analysis Centers. CPTAC investigators collaborate, share data and expertise across consortium, and participate in consortium activities like developing standardized workflows for reproducible studies. | identify, protein, alteration, cancer, genome, clinical, study, proteome, proteogenomic, tumor, data, analysis, consortium, reproducibility | has parent organization: National Cancer Institute | cancer | SCR_017135 | SciCrunch Registry | Clinical Proteomic Tumor Analysis Consortium | 2026-10-31 12:16:46 | 213 | |||||||||
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Biospecimen Research Database Resource Report Resource Website 1+ mentions |
Biospecimen Research Database (RRID:SCR_001944) | data or information resource, database | Database to find literature, established protocols, and best practices for collecting, storing, and handling biological samples. Its main purpose is to help researchers improve the quality and reproducibility of biospecimen-based medical and genetic research. Provides a library of validated protocols that laboratories use to properly process human biospecimens (like blood or tissue) without degrading their molecular integrity. Offers procedural guidelines (BEBPs) backed by scientific literature to protect samples from pre-analytical variables (e.g., storage temperature, time-to-freezing). Catalogs thousands of peer-reviewed articles focused on biospecimen science. | NCI, biospecimen, biomarker, gene, standard operating procedure, sop, database |
is related to: Biorepositories and Biospecimens Research Branch has parent organization: National Cancer Institute has parent organization: National Institutes of Health |
NCI | PMID:25757745 | Free, Freely available | SciRes_000169 | https://dctd.cancer.gov/programs/cdp/organization/bbrb | https://brd.nci.nih.gov/brd/ | SCR_001944 | SciCrunch Registry | NCI Biospecimen Research Database, Biospecimen Research Database (BRD) | 2026-10-31 12:19:46 | 5 |
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Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
