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| Resource Name | Proper Citation | Abbreviations | Resource Type |
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BiblioSpec Resource Report Resource Website 10+ mentions |
BiblioSpec (RRID:SCR_004349) | data or information resource, software resource, database | BiblioSpec enables the identification of peptides from tandem mass spectra by searching against a database of previously identified spectra. This suite of software tools is for creating and searching MS/MS peptide spectrum libraries. BiblioSpec is available free of charge for noncommercial use through an interactive web-site at http://depts.washington.edu/ventures/UW_Technology/Express_Licenses/bibliospec.php The BiblioSpec package contains the following programs: * BlibBuild creates a library of peptide MS/MS spectra from MS2 files. * BlibFilter removes redundant spectra from a library. * BlibSearch searches a spectrum library for matches to query spectra, reporting the results in an SQT file. In addition to the primary programs, the following auxiliary programs are available: * BlibStats writes summary statistics describing a library. * BlibToMS2 writes a library in MS2 file format. * BlibUpdate adds, deletes, or annotates spectra. * BlibPpMS2 processes spectra (bins peaks, removes noise, normalizes intensity) as done in BlibSearch and prints the resulting spectra to a text file. Several reference libraries are available for download. These libraries are updated regularly and are for use under the Linux operating system. You will find libraries for * Escherichia coli * Saccharomyces cerevisiae * Caenorhabditis elegans | has parent organization: University of Washington; Seattle; USA | PMID:18428681 | nlx_36841 | SCR_004349 | 2026-08-03 09:32:39 | 29 | ||||||||||
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University of Washington; Seattle; USA Resource Report Resource Website 1+ mentions |
University of Washington; Seattle; USA (RRID:SCR_011749) | UW | university | University of Washington is public research university in Seattle, Washington. Has university campuses in Seattle, Tacoma and Bothell, academic medical center and professional and continuing education programs. | public, research, university, campus, medical, center |
uses: ReadCube uses: Scizzle is affiliated with: Diabetes Research Centers is related to: Kidney Health Initiative is related to: Alzheimers Disease Genetics Consortium is related to: Clinical and Translational Science Awards Consortium is related to: nbdocker is related to: Trail Technical Report Archive is related to: Urinary Stone Disease Research Network is related to: Seattle Alzheimer Disease Brain Cell Atlas is parent organization of: UW Department of Biochemistry is parent organization of: University of Washington Nath Research Group is parent organization of: CorQ is parent organization of: Maitreya Dunham's Lab is parent organization of: National ESCA and Surface Analysis Center for Biomedical Problems is parent organization of: Neurological Disorder Resources is parent organization of: BEAGLE is parent organization of: PolyPhred is parent organization of: Aging Genes and Interventions Database is parent organization of: Washington National Primate Research Center is parent organization of: Macaque.org is parent organization of: Primate Resource Referral Service is parent organization of: COnsensus-DEgenerate Hybride Oligonucleotide Primers is parent organization of: MindSeer is parent organization of: BrainInfo is parent organization of: FMA is parent organization of: Solstice is parent organization of: Foldit is parent organization of: Segway - a way to segment the genome is parent organization of: svmvia is parent organization of: qvality - Nonparametric estimation of posterior error probabilities is parent organization of: Charge Czar: Peptide charge state determination for low-resolution tandem mass spectra is parent organization of: BiblioSpec is parent organization of: Segtools is parent organization of: Genomedata is parent organization of: Language Map Experiment Management System is parent organization of: Philius is parent organization of: Patient-Reported Outcomes Measurement Information System is parent organization of: hyfi: software suite for binding site search is parent organization of: Percolator: Semi-supervised learning for peptide identification from shotgun proteomics datasets is parent organization of: Consed is parent organization of: PHYLIP is parent organization of: Metabolism and Transport Drug Interaction Database is parent organization of: SVM-fold: Protein Fold Prediction is parent organization of: MORGAN is parent organization of: Digital Anatomist Interactive Atlases Project is parent organization of: Rankprop - Protein Ranking by Network Propagation is parent organization of: Noble Research Lab is parent organization of: A statistical framework for genomic data fusion is parent organization of: National Alzheimer's Coordinating Center is parent organization of: NSR Physiome Project is parent organization of: University of Washington Seattle WA. Pharmacology is parent organization of: Decoys-R-Us is parent organization of: MPIM - Mitochondrial Protein Import Machinery is parent organization of: Yeast Resource Center is parent organization of: Foundational Model Explorer is parent organization of: Alcohol and Drug Abuse Institute, University of Washington is parent organization of: Eric H. Chundlers Links is parent organization of: UW Genome Sciences is parent organization of: LAMHDI: The Initiative to Link Animal Models to Human DIsease is parent organization of: University of Washington Alzheimers Disease Research Center is parent organization of: Sageweb is parent organization of: Laboratory of Phil Green at Univeristy of Washington is parent organization of: Genome Institue at Washington University is parent organization of: Crux tandem mass spectrometry analysis software is parent organization of: HMMSeg is parent organization of: GeneTests is parent organization of: Phylogeny Programs is parent organization of: NHLBI Grand Opportunity Exome Sequencing Project is parent organization of: NHLBI Exome Sequencing Project (ESP) is parent organization of: Francisella tularensis Genome Research is parent organization of: Alcohol and Drug Abuse Institute (ADAI) Library: Alcohol, Drugs and Tobacco Web Links is parent organization of: L2L Microarray Analysis Tool is parent organization of: CELL- PREVEN Project is parent organization of: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer is parent organization of: MIPgen is parent organization of: i2b2 Cross-Institutional Clinical Translational Research project is parent organization of: ACTTION is parent organization of: GeneReviews is parent organization of: Aging Dementia and Traumatic Brain Injury Study is parent organization of: iModel is parent organization of: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility is parent organization of: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is parent organization of: University of Washington Diabetes Research Center Cell Function Analysis Core Facility is parent organization of: University of Washington Diabetes Research Center Human Studies Core Facility is parent organization of: University of Washington Diabetes Research Center is parent organization of: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core is parent organization of: University of Washington Diabetes Research Center Administrative Core is parent organization of: University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core is parent organization of: University of Washington Nutrition and Obesity Research Center is parent organization of: University of Washington Nutrition and Obesity Research Center Administrative and Enrichment Core is parent organization of: University of Washington Nutrition and Obesity Research Center Analytic Core is parent organization of: University of Washington Nutrition and Obesity Research Center Energy Balance Core is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core is parent organization of: Cystic Fibrosis Center - University of Washington is parent organization of: Science Dynamics is parent organization of: Shannon is parent organization of: Skyline is parent organization of: PanoramaWeb is parent organization of: SBFSEM-tools is parent organization of: TopHat is parent organization of: Combined Annotation Dependent Depletion is parent organization of: SuperSegger is parent organization of: Monocle3 is parent organization of: Robetta is parent organization of: Mozak is parent organization of: Protein Cross-Linking Database is parent organization of: Kojak is parent organization of: Simple Behavior Analysis project is parent organization of: ACRoBaT is parent organization of: University of Washington I-LABS MEG Brain Imaging Center Core Facility is parent organization of: University of Washington Transgenic Resources Program Core Facility is parent organization of: University of Washington Mouse CRISPR Core Facility is parent organization of: University of Washington Translational BioImaging Core Facility is parent organization of: University of Washington Northwest Metabolomics Research Center Core Facility is parent organization of: University of Washington Histology and Imaging Core Facility is parent organization of: University of Washington Gnotobiotic Animal Core Facility is parent organization of: University of Washington In Vivo Services (IVS) Core Facility is parent organization of: University of Washington Histology and Imaging Core Facility |
Wikidata:Q219563, nlx_67476, ISNI:122986657, Crossref funder ID:100007812, grid.34477.33 | https://ror.org/00cvxb145 | SCR_011749 | The University of Washington, University of Washington | 2026-08-01 12:04:29 | 9 |
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