Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Current Facets and Filters

  • Related Resources:softcite (facet)

Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

396 Results - per page

Show More Columns | Download 396 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Ingenuity Pathways Knowledge Base
 
Resource Report
Resource Website
1000+ mentions
Ingenuity Pathways Knowledge Base (RRID:SCR_008117) data or information resource, database A horizontally and vertically structured database that pulls scientific and medical information and describes it consistently using the Ingenuity Ontology. The Knowledge Base pulls information from journals, public molecular content databases, and textbooks. Data is curated and and integrated into the Knowledge Base . gene, life science, molecule, protein, research, software, ontology, knowledge base, FASEB list is used by: Ingenuity Pathway Analysis
is listed by: SoftCite
has parent organization: QIAGEN
Available to the research community, Commercial nif-0000-20858 SCR_008117 SciCrunch Registry Ingenuity Knowledge Base 2026-10-24 12:50:53 4808
MutationTaster
 
Resource Report
Resource Website
1000+ mentions
MutationTaster (RRID:SCR_010777) MutationTaster analysis service resource, data analysis service, production service resource, service resource Evaluates disease-causing potential of sequence alterations. bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
PMID:20676075 Acknowledgement requested biotools:mutation_taster, OMICS_00153 https://bio.tools/mutation_taster SCR_010777 SciCrunch Registry 2026-10-24 12:51:01 4781
WU-BLAST
 
Resource Report
Resource Website
100+ mentions
WU-BLAST (RRID:SCR_011824) WU-BLAST analysis service resource, data analysis service, production service resource, service resource Tool to find regions of sequence similarity within selected protein databases quickly, with minimum loss of sensitivity. protein, dna, rna is listed by: OMICtools
is listed by: SoftCite
has parent organization: European Bioinformatics Institute
OMICS_01001 SCR_011824 SciCrunch Registry 2026-10-24 12:51:02 135
Eigensoft
 
Resource Report
Resource Website
1000+ mentions
Issue
Eigensoft (RRID:SCR_004965) EIGENSOFT software resource, software toolkit EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker''s variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes. Source code, documentation and executables for using EIGENSOFT 3.0 on a Linux platform can be downloaded. New features of EIGENSOFT 3.0 include supporting either 32-bit or 64-bit Linux machines, a utility to merge different data sets, a utility to identify related samples (accounting for population structure), and supporting multiple file formats for EIGENSTRAT stratification correction. population genetics, genetics, stratification, variation is listed by: Debian
is listed by: OMICtools
is listed by: SoftCite
has parent organization: Harvard Medical School; Massachusetts; USA
PMID:17194218
DOI:10.1038/ng1847
OMICS_07868, nlx_93059 https://sources.debian.org/src/eigensoft/ http://genepath.med.harvard.edu/~reich/Software.htm SCR_004965 SciCrunch Registry EIGENSOFT Software 2026-10-24 12:51:26 1299
Bioconductor
 
Resource Report
Resource Website
10000+ mentions
Bioconductor (RRID:SCR_006442) software repository, software resource, software toolkit Software repository for R packages related to analysis and comprehension of high throughput genomic data. Uses separate set of commands for installation of packages. Software project based on R programming language that provides tools for analysis and comprehension of high throughput genomic data. catalog, analysis, genomic, metadata, comprehension, statistical, data lists: MSstats
lists: MetaCyto
lists: MetaNeighbor
lists: tximport
lists: clusterProfiler
lists: ropls
lists: FlowSOM
lists: scran
lists: Rsubread
lists: riboSeqR
lists: Biostrings
lists: ConsensusClusterPlus
lists: DESeq2
lists: GenomicFeatures
lists: affy
lists: affydata
lists: Genomic Ranges
lists: Goseq
lists: GAGE
lists: CATALYST
lists: Scmap
lists: Scfind
lists: GenomicRanges
lists: org.Rn.eg.db
lists: Extending Guilt by Association by Degree
lists: ggtree
lists: StructuralVariantAnnotation
lists: scTHI
lists: EnhancedVolcano
lists: DEGreport
lists: variancePartition
lists: biomaRt
lists: MSnbase
lists: ReactomePA
lists: SynergyFinder
lists: CiteFuse
lists: fgsea
lists: GSVA
lists: SimFFPE
lists: FilterFFPE
lists: PhenStat
lists: ChIPseeker
lists: AUCell
lists: svaNUMT
lists: KEGGgraph
lists: epialleleR
lists: microbiome
lists: Orthology.eg.db
lists: org.Hs.eg.db
lists: ExperimentHub
lists: combi
is listed by: OMICtools
is listed by: Gene Ontology Tools
is listed by: SoftCite
is affiliated with: RnaSeqGeneEdgeRQL
is related to: asSeq
is related to: Gene Ontology
is related to: CRCView
is related to: R Project for Statistical Computing
is related to: GEO2R
is related to: LIMMA
is related to: VisR
is related to: edgeR
is related to: IMEx - The International Molecular Exchange Consortium
is related to: CATALYSTLite
is related to: ascend
is related to: minet
has parent organization: Fred Hutchinson Cancer Center
is parent organization of: ncdfFlow
is parent organization of: GenomicRanges
is parent organization of: ReadqPCR
is parent organization of: flowCL
is parent organization of: flowBin
is parent organization of: CorMut
is parent organization of: metaSeq
is parent organization of: VariantAnnotation
is parent organization of: ReQON
is parent organization of: timecourse
is parent organization of: RmiR.Hs.miRNA
is parent organization of: AffyRNADegradation
is parent organization of: ArrayExpress (R)
is parent organization of: GEOquery
is parent organization of: MIMOSA
is parent organization of: HEM
is parent organization of: CNTools
is parent organization of: cn.FARMS
is parent organization of: Clonality
is parent organization of: TransView
is parent organization of: pvac
is parent organization of: QUALIFIER
is parent organization of: flowStats
is parent organization of: rTANDEM
is parent organization of: flowFlowJo
is parent organization of: iASeq
is parent organization of: OLINgui
is parent organization of: SigFuge
is parent organization of: Rdisop
is parent organization of: GeneExpressionSignature
is parent organization of: iBMQ
is parent organization of: TDARACNE
is parent organization of: flowQ
is parent organization of: FlipFlop
is parent organization of: RmiR
is parent organization of: bsseq
is parent organization of: ExomePeak
is parent organization of: flowWorkspace
is parent organization of: massiR
is parent organization of: rbsurv
is parent organization of: GeneMeta
is parent organization of: MergeMaid
is parent organization of: categoryCompare
is parent organization of: metahdep
is parent organization of: snpStats: SnpMatrix and XSnpMatrix classes and methods
is parent organization of: CNVtools
is parent organization of: CGEN
is parent organization of: RCASPAR
is parent organization of: iterativeBMAsurv
is parent organization of: multtest
is parent organization of: globaltest
is parent organization of: MinimumDistance
is parent organization of: VegaMC
is parent organization of: VanillaICE
is parent organization of: SNPchip
is parent organization of: SMAP
is parent organization of: quantsmooth
is parent organization of: mBPCR
is parent organization of: ITALICS
is parent organization of: GenoSet
is parent organization of: exomeCopy
is parent organization of: CGHregions
is parent organization of: CGHbase
is parent organization of: beadarraySNP
is parent organization of: GLAD
is parent organization of: methylMnM
is parent organization of: methyAnalysis
is parent organization of: ARRmNormalization
is parent organization of: ChIPsim
is parent organization of: yaqcaffy
is parent organization of: wateRmelon
is parent organization of: sRAP
is parent organization of: spotSegmentation
is parent organization of: SNM
is parent organization of: SNAGEE
is parent organization of: Simpleaffy
is parent organization of: qcmetrics
is parent organization of: MANOR
is parent organization of: limmaGUI
is parent organization of: ffpe
is parent organization of: dyebias
is parent organization of: DEXUS
is parent organization of: BeadDataPackR
is parent organization of: aroma.light
is parent organization of: ArrayTools
is parent organization of: beadarray
is parent organization of: arrayQuality
is parent organization of: arrayMvout
is parent organization of: affyQCReport
is parent organization of: affyPLM
is parent organization of: AffyExpress
is parent organization of: waveTiling
is parent organization of: gprege
is parent organization of: oneChannelGUI
is parent organization of: LMGene
is parent organization of: factDesign
is parent organization of: pickgene
is parent organization of: betr
is parent organization of: SCAN.UPC
is parent organization of: arrayQualityMetrics
is parent organization of: CALIB
is parent organization of: DEDS
is parent organization of: Harshlight
is parent organization of: MiChip
is parent organization of: OCplus
is parent organization of: bridge
is parent organization of: fRMA
is parent organization of: genArise
is parent organization of: lapmix
is parent organization of: maCorrPlot
is parent organization of: maSigPro
is parent organization of: MACAT
is parent organization of: maigesPack
is parent organization of: MDQC
is parent organization of: metaArray
is parent organization of: nnNorm
is parent organization of: plgem
is parent organization of: PVCA
is parent organization of: RAMA
is parent organization of: stepNorm
is parent organization of: virtualArray
is parent organization of: LPE
is parent organization of: vsn
is parent organization of: ACME
is parent organization of: CoGAPS
is parent organization of: flowFP
is parent organization of: rMAT
is parent organization of: SLqPCR
is parent organization of: nondetects
is parent organization of: unifiedWMWqPCR
is parent organization of: sSeq
is parent organization of: CNVrd2
is parent organization of: plateCore
is parent organization of: RSVSim
is parent organization of: TCC
is parent organization of: CQN
is parent organization of: COMPASS
is parent organization of: flowClust
is parent organization of: SPADE
is parent organization of: OrderedList
is parent organization of: SamSPECTRAL
is parent organization of: flowUtils
is parent organization of: RchyOptimyx
is parent organization of: TEQC
is parent organization of: flowType
is parent organization of: ADaCGH2
is parent organization of: flowViz
is parent organization of: flowTrans
is parent organization of: flowQB
is parent organization of: shinyTANDEM
is parent organization of: flowPlots
is parent organization of: flowPhyto
is parent organization of: flowCore
is parent organization of: flowMerge
is parent organization of: flowMap
is parent organization of: flowMeans
is parent organization of: spliceR
is parent organization of: flowMatch
is parent organization of: flowFit
is parent organization of: flowCyBar
is parent organization of: BEAT
is parent organization of: flowBeads
is parent organization of: CAMERA - Collection of annotation related methods for mass spectrometry data
is parent organization of: MBASED
is parent organization of: MethylAid
is parent organization of: sapFinder
is parent organization of: Pathview
is parent organization of: DSS
is parent organization of: RMassBank
is parent organization of: iontree
is parent organization of: Basic4Cseq
is parent organization of: BiGGR
is parent organization of: mzR
is parent organization of: PAPi
is parent organization of: CGHnormaliter
is parent organization of: Chimera
is parent organization of: BRAIN
is parent organization of: tweeDEseq
is parent organization of: SurvComp
is parent organization of: Triplex
is parent organization of: OmicCircos
is parent organization of: ggbio
is parent organization of: HTqPCR
is parent organization of: NormqPCR
is parent organization of: ddCt
is parent organization of: EasyqpcR
is parent organization of: SWAN
is parent organization of: PING
is parent organization of: DMRforPairs
is parent organization of: SeqGSEA
is parent organization of: h5vc
is parent organization of: deepSNV
is parent organization of: RUVSeq
is parent organization of: BHC
is parent organization of: epigenomix
is parent organization of: IRanges
is parent organization of: GeneNetworkBuilder
is parent organization of: MethylSeekR
is parent organization of: SRAdb
is parent organization of: casper
is parent organization of: htSeqTools
is parent organization of: ChIPXpress
is parent organization of: methVisual
is parent organization of: DeconRNASeq
is parent organization of: EDASeq
is parent organization of: RIPSeeker
is parent organization of: ShortRead
is parent organization of: seqbias
is parent organization of: DEGseq
is parent organization of: arrayMagic
is parent organization of: easyRNASeq
is parent organization of: DNAcopy
is parent organization of: CRLMM
is parent organization of: motifRG
is parent organization of: MMDiff
is parent organization of: MiRaGE
is parent organization of: LVSmiRNA
is parent organization of: ExiMiR
is parent organization of: RPA
is parent organization of: CexoR
is parent organization of: lumi
is parent organization of: baySeq
is parent organization of: tRanslatome
is parent organization of: DNaseR
is parent organization of: DEXSeq
is parent organization of: ChIPpeakAnno
is parent organization of: inSilicoMerging
is parent organization of: minfi
is parent organization of: Methylumi
is parent organization of: miRNApath
is parent organization of: sva package
is parent organization of: dmrFinder
is parent organization of: rqubic
is parent organization of: BicARE
is parent organization of: iBBiG
is parent organization of: eisa
is parent organization of: ChAMP
is parent organization of: cghMCR
is parent organization of: Bioconductor mailing list
is parent organization of: DiffBind
is parent organization of: NarrowPeaks
is parent organization of: CSAR
is parent organization of: CSSP
is parent organization of: TargetScore
is parent organization of: snapCGH
is parent organization of: iChip
is parent organization of: TurboNorm
is parent organization of: Ringo
is parent organization of: RLMM
is parent organization of: charm
is parent organization of: BiSeq
is parent organization of: MEDME
is parent organization of: MEDIPS
is parent organization of: BayesPeak
is parent organization of: ChIPseqR
is parent organization of: Rolexa
is parent organization of: cn.mops
is parent organization of: RankProd
is parent organization of: phyloseq
is parent organization of: HiTC
is parent organization of: CancerMutationAnalysis
is parent organization of: aCGH
is parent organization of: Repitools
is parent organization of: flowPeaks
is parent organization of: Mfuzz
is parent organization of: les
is parent organization of: OLIN
is parent organization of: affylmGUI
is parent organization of: CYCLE
is parent organization of: r3Cseq
is parent organization of: Piano
is parent organization of: RamiGO
hosts: DESeq
hosts: rGADEM
hosts: PICS
hosts: Jmosaics
hosts: R453Plus1Toolbox
hosts: BAC
hosts: targetscan.Hs.eg.db
hosts: Starr
hosts: Qvalue
hosts: topGO
hosts: MmPalateMiRNA
hosts: CGHcall
hosts: EGSEA
hosts: NOISeq
Catt Family Foundation ;
Dana Farber Cancer Institute ;
NHGRI R33 HG002708
PMID:15461798 Free, Freely available OMICS_01759, nif-0000-10445 SCR_006442 SciCrunch Registry 2026-10-24 12:51:28 24163
ANALYZE
 
Resource Report
Resource Website
1000+ mentions
ANALYZE (RRID:SCR_009120) ANALYZE software application, software resource A set of useful accessory programs to the LINKAGE package. It simplifies the performance of a large array of parametric and nonparametric tests for linkage and association on data entered in LINKAGE format pedigree and parameter files. (entry from Genetic Analysis Software) gene, genetic, genomic, pascal, unix, sunos, solaris, osf1 is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154223 SCR_009120 SciCrunch Registry 2026-10-24 12:51:33 1119
QUANTO
 
Resource Report
Resource Website
500+ mentions
QUANTO (RRID:SCR_009084) QUANTO software application, software resource Software program that computes sample size or power for association studies of genes, environmental factors, gene-environment interaction, or gene-gene interaction. Available study designs for a disease (binary) outcome include the unmatched case-control, matched case-control, case-sibling, case-parent, and case-only designs. Study designs for a quantitative tra it include independent individuals and case parent designs. Quanto is a 32-bit Windows application requiring Windows 95, 98, NT, 2000, ME or XP to run. The graphical user interface allows th e user to easily change the model and view the results without having to edit an input file and rerun the program for every model. The results of a session are stored to a log file. This log can be printed or saved to a file for reviewing at a later date. An option is included to create a text file of the log that can be imported into other documents. (entry from Genetic Analysis Software) gene, genetic, genomic, c++, ms-windows, (98/nt/2000/..) is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154095 SCR_009084 SciCrunch Registry 2026-10-24 12:51:32 927
IMPUTE
 
Resource Report
Resource Website
500+ mentions
IMPUTE (RRID:SCR_009245) IMPUTE software application, software resource Software application for estimating (imputing) unobserved genotypes in SNP association studies. The program is designed to work seamlessly with the output of the genotype calling program CHIAMO and the population genetic simulator HAPGEN, and it produces output that can be analyzed using the program SNPTEST. (entry from Genetic Analysis Software) gene, genetic, genomic is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154411 SCR_009245 SciCrunch Registry 2026-10-24 12:51:37 639
SAGE
 
Resource Report
Resource Website
1000+ mentions
SAGE (RRID:SCR_009302) SAGE software application, software resource Software application that provides researchers with the tools necessary for various types of statistical genetic analysis of human family data. (entry from Genetic Analysis Software) gene, genetic, genomic, c, version 4.0 will be in c++, unix, (dec unix/solaris), ms-windows, (95/nt), linux is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154606 SCR_009302 SciCrunch Registry Statistical Analysis for Genetic Epidemiology 2026-10-24 12:51:37 1037
E-Prime
 
Resource Report
Resource Website
100+ mentions
E-Prime (RRID:SCR_009567) E-Prime software application, software resource A suite of applications to fulfill all of your computerized experiment needs. Used by more than 15,000 professionals in the research community, E-Prime provides a truly easy-to-use environment for computerized experiment design, data collection, and analysis. E-Prime provides millisecond precision timing to ensure the accuracy of your data. E-Prime's flexibility to create simple to complex experiments is ideal for both novice and advanced users. The E-Prime suite of applications includes: * E-Studio ? Drag and drop graphical interface for experiment design * E-Basic ? Underlying scripting language of E-Prime * E-Run ? Once the experiment is generated with a single click, E-Run affords you the millisecond precision of stimulus presentation, synchronizations, and data collection. * E-Merge ? Merges your single session data files for group analysis * E-DataAid ? Data management utility * E-Recovery ? Recovers data files experimental control, microsoft, magnetic resonance, visual basic, win32 (ms windows), windows, windows vista, windows xp is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: SoftCite
nlx_155747 http://www.nitrc.org/projects/eprime SCR_009567 SciCrunch Registry E-Prime 2.0 2026-10-24 12:51:42 173
TAGGER
 
Resource Report
Resource Website
50+ mentions
TAGGER (RRID:SCR_009419) software application, software resource Software application (entry from Genetic Analysis Software) gene, genetic, genomic, web-based is listed by: Genetic Analysis Software
is listed by: SoftCite
nlx_154669 SCR_009419 SciCrunch Registry 2026-10-24 12:51:43 93
ANNOVAR
 
Resource Report
Resource Website
5000+ mentions
ANNOVAR (RRID:SCR_012821) ANNOVAR software application, software resource An efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, as well as mouse, worm, fly, yeast and many others). Given a list of variants with chromosome, start position, end position, reference nucleotide and observed nucleotides, ANNOVAR can perform: 1. gene-based annotation. 2. region-based annotation. 3. filter-based annotation. 4. other functionalities. (entry from Genetic Analysis Software) genomic analysis, imaging genomics, next generation sequencing, snp, gene, bio.tools is listed by: OMICtools
is listed by: Genetic Analysis Software
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
is related to: wANNOVAR
has parent organization: OpenBioinformatics.org
PMID:20601685 Free nlx_154225, biotools:annovar, OMICS_00165 https://bio.tools/annovar, https://bio.tools/annovar SCR_012821 SciCrunch Registry functional ANNOtation of genetic VARiants, ANNOVAR: Functional annotation of genetic variants 2026-10-24 12:51:43 6463
Cluster
 
Resource Report
Resource Website
5000+ mentions
Cluster (RRID:SCR_013505) Cluster software resource, software toolkit Software R package. Methods for Cluster analysis. Performs variety of types of cluster analysis and other types of processing on large microarray datasets. Cluster analysis, processing on large microarray datasets is listed by: OMICtools
is listed by: Debian
is listed by: SoftCite
has parent organization: University of California at Berkeley; Berkeley; USA
PMID:14871861 Free, Available for download, Freely available OMICS_01571 http://www.eisenlab.org/eisen/?page_id=42, https://sources.debian.org/src/cluster3/ SCR_013505 SciCrunch Registry Cluster 3.0 2026-10-24 12:51:46 5814
LigandScout
 
Resource Report
Resource Website
100+ mentions
LigandScout (RRID:SCR_014889) software application, software resource Software that takes a macromolecular structure containing a bound ligand and identifies the key features on the ligand which are interacting with points on a protein. Its features include: automatic interpretation of PDB ligands using geometry, dictionaries and rule; advanced handling of co-factors, ions, water molecules and covalently bound ligands; pharmacophore export to Catalyst(tm), MOE(tm) and PHASE(tm) for virtual screening; and the ability to treat co-factors and water molecules as part of the ligand or part of the macromolecule. pharmacophore, macromolecular structure, bound ligand, pdb ligand, virtual screening, ligad based pharmacore design is listed by: SoftCite Available for purchase https://www.chemistryworld.com/ligandscout/1012019.article SCR_014889 SciCrunch Registry 2026-10-24 12:51:46 413
SPARTAN
 
Resource Report
Resource Website
500+ mentions
SPARTAN (RRID:SCR_014901) software application, software resource Software program for determining molecular structure and calculating chemical properties. It has a graphical interface and accurate computational models that are compatible with the iPad, iPhone and iPod Touch. When combined with the Spartan'16 Parallel Suite, this enables the first fully-functional open-ended molecular modeling environment on popular mobile technology. molecular structure, chemical properties, modeling, mobile technology, integration is listed by: SoftCite Commercial SCR_014901 SciCrunch Registry 2026-10-24 12:51:45 566
Primer Express
 
Resource Report
Resource Website
1000+ mentions
Primer Express (RRID:SCR_014326) software application, software resource, standalone software Software that allows users to manually or automatically design custom primers and probes for gene quantitation and allelic discrimination (SNP) real-time PCR applications. It supports assays based on TaqMan and SYBR Green I dye chemistries. primer, probe, design, gene quantitation, allelic discrimination, real time pcr is listed by: SoftCite Pay for product, Specifically made for ThermoFisher Scientific RT-PCR systems SCR_014326 SciCrunch Registry 2026-10-24 12:51:44 4805
HKL-2000
 
Resource Report
Resource Website
100+ mentions
HKL-2000 (RRID:SCR_015547) 3-d visualization software, data processing software, software application, software resource Software package for structural determination and other functions in the field of structural biology. Its programs can perform strategy and simulation, 3-D processing, mosaicity refinement during processing, variable spot size, easy change of the space group, report generation, and other functions. structural biology, structure determination process, simulation, 3d processing, mosaicity, strategy, is listed by: SoftCite PMID:27754618 Commercially available, License required, Runs on Linux, Runs on Mac OS www.hkl-xray.com SCR_015547 SciCrunch Registry 2026-10-24 12:51:46 215
SyStat
 
Resource Report
Resource Website
1000+ mentions
SyStat (RRID:SCR_010455) SyStat commercial organization, software resource A commercial software tool for statistical analysis. statistics is listed by: SoftCite nlx_157643 SCR_010455 SciCrunch Registry 2026-10-24 12:52:26 1102
GeneSpring GX
 
Resource Report
Resource Website
1000+ mentions
GeneSpring GX (RRID:SCR_010972) GeneSpring GX commercial organization, software resource Powerful, accessible statistical tools for fast visualization and analysis of microarrays - expression arrays, miRNA, exon arrays and genomics copy number data. is listed by: OMICtools
is listed by: SoftCite
Commercial license OMICS_00853 SCR_010972 SciCrunch Registry 2026-10-24 12:52:26 1817
Openlab
 
Resource Report
Resource Website
1000+ mentions
Openlab (RRID:SCR_012158) Openlab commercial organization, software resource A software package for performing 2D microscope image processing and integrating and controlling a diverse array of instrumentation in a laboratory environment. The software suite has four basic areas of operation acquisition, image presentation, and storage, analysis, and automation., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. fluorescence imaging, cell biology is listed by: SoftCite THIS RESOURCE IS NO LONGER IN SERVICE rid_000096 SCR_012158 SciCrunch Registry 2026-10-24 12:52:32 1134

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. Neuroscience Information Framework Resources

    Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.