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URL: http://bioconductor.org/packages/epialleleR/
Proper Citation: epialleleR (RRID:SCR_023913)
Description: Software R package for calling hypermethylated variant epiallele frequencies at level of genomic regions or individual cytosines in next-generation sequencing data using binary alignment map files as input. Used for sensitive allele specific methylation analysis in next generation sequencing data. Used for sensitive detection, quantification and visualisation of mosaic epimutations in methylation sequencing data.
Resource Type: software resource, software toolkit
Defining Citation: DOI:10.1101/2022.06.30.498213
Keywords: BAM files, binary alignment map files, allele specific methylation analysis, methylation sequencing data, next generation sequencing data, hypermethylated variant epiallele frequencies calling,
Funding: K.G.Jebsen Foundation ; Norwegian Cancer Society ; Norwegian Research Council
Availability: Free, Available for download, Freely available
Resource Name: epialleleR
Resource ID: SCR_023913
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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