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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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BioLit Resource Report Resource Website 1+ mentions |
BioLit (RRID:SCR_008270) | data or information resource, database, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE, documented on May 16, 2016. The establishment of open access literature makes it possible for knowledge to be extracted from scholarly articles and included in other resources. BioLit aims to extract database identifiers and rich meta-data from open access articles in the life sciences and integrate that information with existing biological databases. We have begun prototyping this effort using a clone of the RCSB Protein Data Bank, a database of macromolecular structures. Cyberinfrastructure is integral to all aspects of conducting experimental research and distributing those results. However, it has yet to make a similar impact on the way we communicate that information. Peer-reviewed publications have long been the currency of scientific research as they are the fundamental unit through which scientists communicate with and evaluate each other. However, in striking contrast to the data, publications have yet to benefit from the opportunities offered by cyberinfrastructure. While the means of distributing publications has vastly improved, publishers have done little else to capitalize on the electronic medium. In particular, semantic information describing the content of these publications is sorely lacking, as is the integration of this information with data in public repositories. This is confounding considering that many basic tools for marking-up and integrating publication content in this manner already exist, such as a centralized literature database, relevant ontologies, and machine-readable document standards. We believe that the research community is ripe for a revolution in scientific communication and that the current generation of scientists will be the one to push it forward. These scientists, generally graduate students and new post-docs and have grown up with cyberinfrastructure as a part of their daily lives, not just a specialized aspect of their profession. They have a natural ability to do science in an electronic environment without the need for printed publications or static documents and, in fact, can feel quite limited by the traditional format of a publication. Perhaps most importantly, they appreciate that the sheer amount of data and the number of publications is prohibitive to the traditional methods of keeping current with the literature. Fink, L., Bourne, P. Reinventing Scholarly Communication for the Electronic Age, CTWatch Quarterly, Volume 3, Number 3, August 2007., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. | literature, pubmed, ontology | has parent organization: University of California at San Diego; California; USA | DOI:10.1093/nar/gkn317 | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-23836 | SCR_008270 | BioLit | 2026-09-03 04:49:32 | 6 | |||||||
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ATASSIA DI FRIEDREICH - PROGETTI 2006 Resource Report Resource Website 1+ mentions |
ATASSIA DI FRIEDREICH - PROGETTI 2006 (RRID:SCR_008391) | data or information resource, portal, topical portal | The aim of this resource is to facilitate and promote, even through fund-raising, the scientific research for the treatment of Friederich''s Ataxia. The mission of this portal is to: - To distribute information to the people affected by the disease and to make the general population aware. - Promote, fund and support the diagnosis, research, cure and potential treatments. - Promote the cooperation with other voluntary associations both national and international. Sponsors: This resource is supported by the RUDI Committee. Keywords: Research, Diagnosis, Cure, Treatment, Disease, Scientific, Friederich''s Ataxia, | nif-0000-30043 | SCR_008391 | GoFar | 2026-09-03 04:49:36 | 1 | |||||||||||
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Caribbean Primate Research Center Resource Report Resource Website 1+ mentions |
Caribbean Primate Research Center (RRID:SCR_008345) | CPRC | biomaterial supply resource, material resource, organism supplier | Center for the study of non-human primates. Its mission is the study and use of non-human primates as models for studies of social and biological interactions and for the discovery of methods of prevention, diagnosis and treatment of diseases that afflict humans. Through the stewardship of three unique facilities—Cayo Santiago Field Station, Sabana Seca Field Station, and the Laboratory of Primate Morphology supports a diverse range of research programs that enhance understanding of primate biology and behavior, with direct applications in biomedical and translational research. | NPRC, NPRC Consortium, ORIP, environment, genetic, antigen, behavior, biological, biomedical, birth, blood, conception, dengue, disease, human, immune system, laboratory, macaca mulatta, macaque, model, monkey, morphology, movement, pathology, primate, reproductive biology, researcher, rh, rhesus, scientific, serological, siv, skeletal system, vaccine, variation, virology |
is listed by: National Primate Research Center Consortium has parent organization: University of Puerto Rico; Puerto Rico; USA |
NIH Office of the Director P40 OD012217 | nif-0000-25870 | https://orip.nih.gov/comparative-medicine/programs/vertebrate-models | SCR_008345 | Caribbean Primate Research Center Program | 2026-09-03 04:49:40 | 7 | ||||||
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G protein receptor interaction feature finding instrument Resource Report Resource Website 10+ mentions |
G protein receptor interaction feature finding instrument (RRID:SCR_008343) | analysis service resource, production service resource, resource, service resource | Griffin (G-protein-receptor interacting feature finding instrument) is a high-throughput system to predict GPCR - G-protein coupling selectively with the input of GPCR sequence and ligand molecular weight. This system consists of two parts: 1) HMM section using family specific multiple alignment of GPCRs, 2) SVM section using physico-chemical feature vectors in GPCR sequence. G-protein coupled receptors (GPCR), which is composed of seven transmembrane helices, play a role as interface of signal transduction. The external stimulation for GPCR, induce the coupling with G-protein (Gi/o, Gq/11, Gs, G12/13) followed by different kinds of signal transduction to inner cell. About half of distributed drugs are intending to control this GPCR - G-protein binding system, and therefore this system is important research target for the development of effective drug. For this purpose, it is necessary to monitor, effectively and comprehensively, of the activation of G-protein by identifying ligand combined with GPCR. Since, at present, it is difficult to construct such biochemical experiment system, if the answers for experimental results can be prepared beforehand by using bioinformatics techniques, large progress is brought to G-protein related drug design. Previous works for predicting GPCR-G protein coupling selectivity are using sequence pattern search, statistical models, and HMM representations showed high sensitivity of predictions. However, there are still no works that can predict with both high sensitivity and specificity. In this work we extracted comprehensively the physico-chemical parameters of each part of ligand, GPCR and G-protein, and choose the parameters which have strong correlation with the coupling selectivity of G-protein. These parameters were put as a feature vector, used for GPCR classification based on SVM. | drug, alignment, biochemical, bioinformatic, coupling, gpcr, g-protein, helix, instrument, interface, ligand, molecular, pattern, physico-chemical, receptor interacting, sequence, signal transduction, stimulation, svm, system, technique, transmembrane, weight, instrument, equipment, hardware, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Computational Biology Research Center Core Facility |
National Institute of Advanced Industrial Science and Technology | nif-0000-25210, biotools:griffin | https://bio.tools/griffin | SCR_008343 | Griffin | 2026-09-03 04:49:34 | 21 | |||||||
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Xiphophorus Genetic Stock Center Resource Report Resource Website 100+ mentions |
Xiphophorus Genetic Stock Center (RRID:SCR_008340) | biomaterial supply resource, material resource, organism supplier | Supplier of xiphophorus (platyfish or swordtails) from pedigreed parental lines, representing variety of species. In addition to supplying strains and providing consultation on husbandry and genetic questions, the XGSC produces custom interspecies hybrids (both first generation F1, and backcross hybrid generation BC1) for a variety of projects. | RIN, Resource Information Network, est, fish, cryopreservation, microsatellite, swordtail, RRID Community Authority |
is used by: Integrated Animals is listed by: Resource Information Network has parent organization: Texas State University; Texas; USA |
NCI P01 CA75137; NIH Office of the Director R24 OD011120; University of Texas MD Anderson Center |
nif-0000-24971 | https://orip.nih.gov/comparative-medicine/programs/vertebrate-models | SCR_008340 | XGSC | 2026-09-03 04:49:42 | 109 | |||||||
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Nerve Tissue Resource Report Resource Website |
Nerve Tissue (RRID:SCR_008219) | NUS Nerve Tissue | data or information resource, image collection | THIS RESOURCE IS NO LONGER IN SERVICE, documented on March 18, 2013. 15 annotated electron micrographs of different parts of the nervous system. Different nerve tissues are depicted. | electron micrograph, ganglion, anterior, astrocyte, axon, cell, cerebellum, corpuscle, cytoplasm, dendritic, granule, horn, lipofuscin, microglial, micrograph, motor neuron, myelinated, nerve, neuron, neuron microscopy, oligodendrocyte, osmic acid, pacinian, peripheral, sciatic, sensory, spinal cord, synapse, terminal, tissue, unmyelinated, nervous system, nerve tissue | has parent organization: Yong Loo Lin School of Medicine; Singapore; Singapore | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-21298 | SCR_008219 | 2026-09-03 04:49:25 | 0 | ||||||||
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Nature Supplements: Collections archive Resource Report Resource Website |
Nature Supplements: Collections archive (RRID:SCR_008337) | data or information resource, narrative resource, portal, topical portal | This website provides summary collections written for a broad audience highlighting some of the significant advances in a particular field. These are not scientific articles although they may reference scientific work. Sponsors: This resource is supported by Nature.com | drug, energy, gene, gene targeting, aids, animal, biogenesis, cancer, cell, disease, genomics, health, hiv, human immunodeficiency virus, malaria, metagenomics, microrna, mrna, nanotechnology, neuropathic, pain, rnai, rna plant, therapy, vaccine | nif-0000-24926 | SCR_008337 | Nature Collections Supplements | 2026-09-03 04:49:29 | 0 | ||||||||||
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Institute of Neuroinformatics Resource Report Resource Website 1+ mentions |
Institute of Neuroinformatics (RRID:SCR_008331) | institution | The mission of the Institute is to discover the key principles by which brains work and to implement these in artificial systems that interact intelligently with the real world. The Institute of Neuroinformatics is built of many people covering a wide range of disciplines and research areas. The major research projects and areas are listed below. - Behavior and Cognition: At the Institute of Neuroinformatics researchers investigate in Behavior and Cognition on various levels, ranging from neuronal circuit models of learning and adaptation over psychophysical experiments for color constancy up to modeling complex behavioral tasks such as exploration and goal-directed navigation. - Computation in Neural Circuits: By examining the brains of cats, rats and monkeys, and by making simulations of the cortex, INI hopes to learn how this circuit performs such widely different tasks. This knowledge might lead to advances in how computers are designed, and will certainly lead to advances in the subtlety and power of medical neuroscience. - Neurotechnologies: INI aims to harness the principles of biological computation, which can be expected to have a major impact on the technology market as autonomous intelligence pervades equipment, vehicles, buildings, utilities and clothing. Sponsors: INI is supported by European Union (EU), Gerbert Ruf Stiftung, Neuroscience Center (ZNZ), Swiss Confederation (KTI), Swiss Federal Institute of Technology Zurich (ETH), Swiss National Science Foundation (SNF), University of Zurich (UZH), and VW Stiftung | adaptation, artificial system, autonomous, behavior, biological, brain, cat, circuit, cognition, color, computation, constancy, cortex, intelligence, learning, medical, model, monkey, neural, neuroinformatics, neuronal, neuroscience, neurotechnology, psychophysical, rat, researcher, simulation, technology | has parent organization: University of Zurich; Zurich; Switzerland | nif-0000-24788 | SCR_008331 | INI | 2026-09-03 04:49:40 | 5 | |||||||||
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Southwest National Primate Research Center Resource Report Resource Website 50+ mentions |
Southwest National Primate Research Center (RRID:SCR_008292) | data or information resource, portal, topical portal | Center that supports studies of nonhuman primate models of human diseases, including common chronic diseases and infectious diseases and the effects that genetics and the environment have on physiological processes and disease susceptibility. SNPRC encourages the use of its resources by investigators from the national and international biomedical research communities. | NPRC, NPRC Consortium, ORIP, environment, genetic, aids, animal, baboon, biomedical, breeding, chimpanzee, chronic, colony, disease, human, infectious, macaques, marmoset, nonhuman, physiological, population, primate, process, research, rhesus, specie, study, susceptibility, veterinary, spf, specific, pathogen, free |
is listed by: National Primate Research Center Consortium has parent organization: Texas Biomedical Research Institute; Texas; USA |
NIH Office of the Director P51 OD011133; NIH Office of the Director U42 OD010442 |
nif-0000-24359 | https://orip.nih.gov/comparative-medicine/programs/vertebrate-models | SCR_008292 | SNPRC | 2026-09-03 04:49:32 | 90 | |||||||
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Carleton University; Ontario; Canada Resource Report Resource Website |
Carleton University; Ontario; Canada (RRID:SCR_011136) | university | Public comprehensive university in Ottawa, Ontario, Canada. Founded in 1942 as Carleton College, a private, non-denominational evening college to serve returning World War II. |
is parent organization of: Aptamer Base is parent organization of: An Extended and Parallel version of Clustal is parent organization of: Carleton University Tissue Engineering and Applied Materials Hub Core Facility |
Crossref funder ID:100008095, grid.34428.39, Wikidata:Q1041737, nlx_45745, ISNI:0000 0004 1936 893X | https://ror.org/02qtvee93 | SCR_011136 | 2026-09-03 04:50:51 | 0 | ||||||||||
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Aldevron Resource Report Resource Website 10+ mentions |
Aldevron (RRID:SCR_011017) | Aldevron | commercial organization | Contract manufacturing services company, specializing in plasmid DNA manufacturing, protein services and antibody development.Producesg high quality plasmid DNA, proteins, enzymes, antibodies, and other biologicals in support of clients objectives. | is listed by: ScienceExchange | SciEx_9447 | http://www.scienceexchange.com/facilities/aldevron | SCR_011017 | 2026-09-03 04:50:52 | 46 | |||||||||
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Medical Research Council Resource Report Resource Website 50+ mentions |
Medical Research Council (RRID:SCR_011018) | MRC, UK MRC | institution | The Medical Research Council is a publicly-funded organization dedicated to improving human health. We support research across the entire spectrum of medical sciences, in universities and hospitals, in our own units, centers and institutes in the UK, and in our units in Africa. | is related to: EMIF | Wikidata: Q746879, Crossref funder ID: 501100000265, nlx_inv_1005080, ISNI: 122478951, grid.14105.31 | https://ror.org/03x94j517 | SCR_011018 | UK Medical Research Council, British Medical Research Council | 2026-09-03 04:50:36 | 55 | ||||||||
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Catholic University of Louvain; Louvain-la-Neuve; Belgium Resource Report Resource Website 1+ mentions |
Catholic University of Louvain; Louvain-la-Neuve; Belgium (RRID:SCR_011141) | UCL | university | Belgium's largest French speaking university. |
is related to: Pharma-Planta Consortium is related to: PRECISESADS is parent organization of: Catholic University of Louvain Institute of Experimental and Clinical Research Imaging Platform Core Facility is parent organization of: Catholic University of Louvain Institute of Experimental and Clinical Research Flow Cytomerty Platform Core Facility is parent organization of: Catholic University of Louvain Genomics platform Core Facility |
grid.7942.8, Wikidata:Q378134, ISNI:0000 0001 2294 713X, nlx_143960, Crossref funder ID:501100008135 | https://ror.org/02495e989 | http://www.uclouvain.be/en-index.html | SCR_011141 | Catholic University of Louvain, Universit� catholique de Louvain, Universite catholique de Louvain | 2026-09-03 04:50:57 | 2 | |||||||
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Mouse Clinical Institute; Alsace; France Resource Report Resource Website 10+ mentions |
Mouse Clinical Institute; Alsace; France (RRID:SCR_011021) | MCI, ICS | institution | Research infrastructure for generation of new mouse models,being therefore the most important transgenic mouse production unit in France. | is related to: AgedBrainSYSBIO | ISNI: 0000 0004 0404 8159, nlx_158126, grid.452426.3 | https://ror.org/03cjqqq10 | SCR_011021 | Mouse Clinical Institute, Institut Clinique de la Souris, Institut Clinique de la Souris; Alsace; France | 2026-09-03 04:50:52 | 12 | ||||||||
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Cayetano Heredia University; Lima; Peru Resource Report Resource Website 10+ mentions |
Cayetano Heredia University; Lima; Peru (RRID:SCR_011142) | university | Private nonprofit university located in Lima, Peru. It was named in honor of Cayetano Heredia, one of the eminent Peruvian physicians of the 19th century. The university is overseen by a board of trustees and is not owned by any private or state entity. | is parent organization of: CELL- PREVEN Project | nlx_71545 | http://www.upch.edu.pe/ | SCR_011142 | UPCH | 2026-09-03 04:50:51 | 37 | |||||||||
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Center for Information Technology Resource Report Resource Website |
Center for Information Technology (RRID:SCR_011143) | CIT | government granting agency | The Center for Information Technology''s (CIT) mission is to provide, coordinate, and manage information technology and to advance computational science. CIT incorporates the power of modern computers into the biomedical programs and administrative procedures of the NIH by focusing on three primary activities: conducting computational biosciences research, developing computer systems, and providing computer facilities. CIT supports NIH''s research and management programs with efficient, cost-effective administrative and high-powered scientific computing, software development, networking, and telecommunications services. CIT also provides bioinformatics support through its scientists, engineers, and mathematicians. Among its activities, the CIT: * engages in collaborative research and provides collaborative support to NIH investigators in the area of computational bioscience * provides efficient, cost-effective information systems and networking services * provides state-of-the-art scientific and administrative computing facilities * identifies new computing technologies with innovative applications to biomedical research * creates, purchases, and distributes software applications * provides NIH staff with computing information, expertise, and training * provides data-processing and high-performance computing facilities, integrated telecommunications data networks, and services to the U.S. Department of Health and Human Service (HHS) and other Federal agencies * serves as a data center to HHS and other Federal agencies * develops, administers, and manages NIH systems and provides consulting services to NIH Institutes and Centers in support of administrative and business applications |
has parent organization: National Institutes of Health is parent organization of: Federal Interagency Traumatic Brain Injury Research Informatics System is parent organization of: MIPAV: Medical Image Processing and Visualization |
nlx_inv_1005031 | SCR_011143 | 2026-09-03 04:51:10 | 0 | ||||||||||
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Central University of the Caribbean; Puerto Rico; USA Resource Report Resource Website |
Central University of the Caribbean; Puerto Rico; USA (RRID:SCR_011145) | UCC | university | Private university in Bayamón, Puerto Rico that focuses on graduate studies and professional certifications in the health sciences. |
is parent organization of: UCC Common Instrumentation Area and Services is parent organization of: UCC Behavioral Testing Facility is parent organization of: UCC Biomedical Proteomic Facility is parent organization of: UCC Data Management and Statistical Research Support Unit is parent organization of: UCC HIV and Substance of Abuse Laboratory Core is parent organization of: UCC Immunocytochemistry Laboratory is parent organization of: UCC Neuronal Glia Culture Facility is parent organization of: UCC Optical Imaging Facility is parent organization of: UCC Protein and Nucleic Acid Core Facility is parent organization of: UCC Transmission Electron Microscopy Laboratory |
grid.253922.d, Wikidata:Q5061968, nlx_156113, ISNI:0000 0000 9699 6324 | https://ror.org/01rpmzy83 | SCR_011145 | Universidad Central del Caribe, Central University of the Caribbean | 2026-09-03 04:50:42 | 0 | ||||||||
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UNC Microarray Database Resource Report Resource Website 10+ mentions |
UNC Microarray Database (RRID:SCR_010979) | UNC MD, UNCMD | data or information resource, data repository, database, service resource, storage service resource | Database for microarray data storage, retrieval, analysis, and visualization. | microarray, FASEB list |
is listed by: OMICtools has parent organization: University of North Carolina at Chapel Hill; North Carolina; USA |
Account required, The community can contribute to this resource | OMICS_00872 | SCR_010979 | UNC-Chapel Hill Microarray Database | 2026-09-03 04:51:02 | 33 | |||||||
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Chang Gung University; Taoyuan; Taiwan Resource Report Resource Website 1+ mentions |
Chang Gung University; Taoyuan; Taiwan (RRID:SCR_011149) | CGU | university | Chang Gung University is a private university in Guishan District, Taoyuan City, Taiwan. | is parent organization of: Chang Gung University College of Medicine; Taoyuan; Taiwan | nlx_157707 | SCR_011149 | Chang Gung University | 2026-09-03 04:51:10 | 1 | |||||||||
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Baylor University; Texas; USA Resource Report Resource Website 1+ mentions |
Baylor University; Texas; USA (RRID:SCR_011029) | university | Private Baptist research university in Waco, Texas. Baylor was chartered in 1845 by the last Congress of the Republic of Texas. |
is parent organization of: Baylor University Department of Psychology and Neuroscience is parent organization of: Baylor College of Medicine - Shaw Laboratory is parent organization of: Genboree Discovery System is parent organization of: National Center for Macromolecular Imaging is parent organization of: Sea Urchin Genome Project is parent organization of: Sea Urchin Genome Project is parent organization of: Tribolium castaneum Genome Project is parent organization of: Honey Bee Genome Project is parent organization of: EMDataResource.org is parent organization of: BCM Department of Neuroscience Andreas Tolias Lab is parent organization of: HapMap 3 and ENCODE 3 is parent organization of: SimRare is parent organization of: PhenoMan is parent organization of: Human Epigenome Atlas is parent organization of: Baylor College of Medicine; Department of Pharmacology is parent organization of: Baylor College of Medicine Department of Neuroscience is parent organization of: Mouse Mutagenesis Center for Developmental Defects is parent organization of: Gene Atlas is parent organization of: Dictyostelium discoideum genome database is parent organization of: Bovine Genome Project is parent organization of: BCM ET is parent organization of: Atlas2 is parent organization of: Genboree Workbench is parent organization of: BCM Analyte Center is parent organization of: BCM Circulating Tumor Cells Core Facility is parent organization of: Baylor College of Medicine Human Genome Sequencing Center is parent organization of: Mouse Genome Project is parent organization of: Dictyostelium discoideum genome database |
ISNI:0000 0001 2111 2894, Crossref funder ID:100007492, nlx_50627, grid.252890.4, Wikidata:Q812573 | https://ror.org/005781934 | SCR_011029 | 2026-09-03 04:50:53 | 2 |
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