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URL: http://catlas.org/mousebrain/#!/
Proper Citation: CATlas (RRID:SCR_018690)
Description: Atlas of gene regulatory elements in adult mouse cerebrum. Atlas of CIS elements, providing information on accessible chromatin in individual cells from regions of adult mouse isocortex, olfactory bulb, hippocampus and cerebral nuclei. Uses resulting data to define candidate cis-regulatory DNA elements in distinct cell groups. Many are linked to putative target genes expressed in diverse cerebral cell types and uncover transcriptional regulators involved in broad spectrum of molecular and cellular pathways in different neuronal and glial cell populations. Used for analysis of gene regulatory programs of mammalian brain and interpretation of non-coding risk variants associated with various neurological disease and traits in humans.
Synonyms: , Cis-element Atlas, Ren lab web portal for chromatin accessibility data
Resource Type: atlas, data or information resource
Defining Citation: DOI:10.1101/2020.05.10.087585
Keywords: Gene, regulatory element, gene regulatory element, adult mouse, cerebrum, Cis-element, chromatin, mouse isocortex, olfactory bulb, hippocampus, cerebral nuclei, cis regulatory DNA element, brain, neurological disease
Availability: Free, Freely available
Resource Name: CATlas
Resource ID: SCR_018690
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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