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Resource Name
GoMapMan
RRID:SCR_005060 RRID Copied      
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GoMapMan (RRID:SCR_005060)
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Resource Information

URL: http://www.gomapman.org/

Proper Citation: GoMapMan (RRID:SCR_005060)

Description: An open web-accessible resource for gene functional annotations in the plant sciences to facilitate improvement, consolidation and visualization of gene annotations across several plant species. It is based on the MapMan ontology, organized in the form of a hierarchical tree of biological concepts, which describe gene functions. Currently, genes of the model species Arabidopsis, potato, tomato, rice, and tobacco are included. The main features are (i) dynamic and interactive gene product annotation through various curation options; (ii) consolidation of gene annotations for different plant species through the integration of orthologue group information; (iii) traceability of gene ontology changes and annotations; (iv) integration of external knowledge about genes from different public resources; and (v) providing gathered information to high-throughput analysis tools via dynamically generated export files. All of the GoMapMan functionalities are openly available, with the restriction on the curation functions, which require prior registration to ensure traceability of the implemented changes.

Abbreviations: GoMapMan

Resource Type: database, data or information resource, service resource

Defining Citation: PMID:24194592

Keywords: functional annotation, function, annotation, gene, visualization, ortholog, ontology, microarray, gene annotation, bio.tools

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This resource

is listed by

OMICtools

is listed by

bio.tools

is listed by

Debian

is related to

Gene Set Enrichment Analysis

is related to

MapMan

is related to

Biomine

is related to

SEGS

has parent organization

Jozef Stefan Institute; Ljubljana; Slovenia

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