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Resource Name

Allen Mouse Brain Reference Atlas

RRID:SCR_002978 RRID Copied

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Allen Mouse Brain Reference Atlas (RRID:SCR_002978)

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Resource Information

URL: http://mouse.brain-map.org/static/atlas

Proper Citation: Allen Mouse Brain Reference Atlas (RRID:SCR_002978)

Description: Allen Mouse Brain Atlas includes full color, high resolution anatomic reference atlas accompanied by systematic, hierarchically organized taxonomy of mouse brain structures. Enables interactive online exploration of atlas and to provide deeper level of 3D annotation for informatics analysis and viewing in Brain Explorer 3D viewer.

Abbreviations: ABA, ARA, ABA Mouse Brain

Synonyms: Allen Mouse Brain Reference Atlas, Allen Reference Atlases, ABA Adult Mouse Brain, ARA ontology

Resource Type: atlas, data or information resource, reference atlas

Keywords: 3D, map, gene, expression, data, adult, mouse, brain, interactive, image

Availability: Free, Freely available

Resource Name: Allen Mouse Brain Reference Atlas

Resource ID: SCR_002978

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This resource

is used by	NIF Data Federation
is used by	BICCN
is related to	BrainStars
is related to	PubAnatomy
is related to	Integrated Brain Gene Expression
is related to	Allen Brain Atlas API
is related to	3DBar
is related to	aGEM
is related to	CellTax vignette
is related to	Blue Brain Cell Atlas
is related to	Allen Mouse Brain Common Coordinate Framework
is related to	SHARCQ
is related to	Enhancer Trap Line Browser
is related to	Linked Neuron Data
has parent organization	Allen Institute for Brain Science
has parent organization	Allen Brain Atlas
works with	MeshView
works with	Brain Gene Expression Analysis toolbox
works with	VisuAlign
works with	MIRACL

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Data and Source Information

Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400

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