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URL: https://genome.ucsc.edu/cgi-bin/hgLiftOver
Proper Citation: liftOver (RRID:SCR_018160)
Description: Web tool to convert genome coordinates and genome annotation files between assemblies. Used to translate genomic coordinates from one assembly version into another and retrieves putative orthologous regions in other species using UCSC chained and netted alignments.
Resource Type: data processing software, service resource, software application, software resource
Defining Citation: DOI:10.1093/nar/gkj144
Keywords: Convert genome coordinate, genome annotation file, translate genomic coordinate, assembly version, retrieve orthologous region
Funding: Howard Hughes Medical Institute ; NCI ; NHGRI
Availability: Free, Available for download, Freely available
Resource Name: liftOver
Resource ID: SCR_018160
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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