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URL: https://github.com/macs3-project/MACS
Proper Citation: MACS (RRID:SCR_013291)
Description: Software Python package for identifying transcript factor binding sites. Used to evaluate significance of enriched ChIP regions. Improves spatial resolution of binding sites through combining information of both sequencing tag position and orientation. Can be used for ChIP-Seq data alone, or with control sample with increase of specificity.
Abbreviations: MACS
Synonyms: MACS - Model-based Analysis for ChIP-Seq, Model-based Analysis for ChIP-Seq, MACS2
Resource Type: data analysis software, data processing software, software application, software resource
Defining Citation: PMID:18798982, DOI:10.1186/gb-2008-9-9-r137
Keywords: identify, transcript, factor, binding, site, model, based, analysis, CHIP Seq, short, read, sequencer, protein, DNA, bio.tools
Funding: NHGRI HG004069; NHGRI HG004270; NIDDK DK074967
Availability: Free, Available for download, Freely available
Resource Name: MACS
Resource ID: SCR_013291
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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