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Proper Citation: HOMER (RRID:SCR_010881)
Description: Software tools for Motif Discovery and next-gen sequencing analysis. Used for analyzing ChIP-Seq, GRO-Seq, RNA-Seq, DNase-Seq, Hi-C and numerous other types of functional genomics sequencing data sets. Collection of command line programs for unix style operating systems written in Perl and C++.
Abbreviations: HOMER
Synonyms: HOMER, Hypergeometric Optimization of Motif EnRichment, Homer, Homer v4.5
Resource Type: data analysis software, data processing software, sequence analysis software, software application, software resource
Defining Citation: PMID:20513432
Keywords: motif, discovery, next, generation, sequencing, analysis, genomic, data
Funding: Foundation Leducq Transatlantic Network Grant ; NCI CA52599; NIDDK DK063491; NIGMS P50 GM081892; NIH HC088093; NURSA consortium grant
Resource Name: HOMER
Resource ID: SCR_010881
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
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