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Resource Name

JGIDB

RRID:SCR_004706 RRID Copied

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JGIDB (RRID:SCR_004706)

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Resource Information

URL: http://genome.jgi-psf.org/

Proper Citation: JGIDB (RRID:SCR_004706)

Description: JGI publishes all its sequenced genomes on its Genome Portal. Here you can download sequence files, BLAST against a particular genome, and view annotations. Advanced tools, including genome, GO, KEGG, and KOG browsers, are available for eukaryotes. JGI''s Genome Browser lets you browse through JGI-predicted genes, view sequences, and study detailed alignments with nucleotide and amino acid sequences from relevant sequence databases. Individual genomes sites can be reached using the Tree of Life. These sites provide download access to sequence files and tools for annotation and BLAST alignment. Eukaryotic genome sites include additional resources such as genome browsing, search, and functional (KEG/KOGG/GO) annotations.

Abbreviations: JGIDB

Synonyms: JGI Genome Portal, DOE Joint Genome Institute Genome Portal

Resource Type: portal, database, project portal, data or information resource

Defining Citation: PMID:24225321, PMID:22110030

Keywords: archaea, bacteria, gebas, metagenomes, plant, fungal, metagenomics, microbial, bio.tools

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Funding: DOE

Resource Name: JGIDB

Resource ID: SCR_004706

Alternate IDs: nlx_69965, biotools:doe_joint_genome_institute_genome_portal

Alternate URLs: https://bio.tools/doe_joint_genome_institute_genome_portal

Record Creation Time: 2022-01-29 12:02:26

Record Last Update: 2026-09-03 04:47:26

This resource

is listed by	bio.tools
is listed by	Debian
has parent organization	DOE Joint Genome Institute

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Data and Source Information

Source: SciCrunch Registry

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