Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00051517
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:37980413
Synonyms: bli-1(e1431) II
Notes: Supplementary_genotype bli-1(e1431) II
Proper citation: RRID:WB-STRAIN:WBStrain00051517 Copy
http://www.wormbase.org/db/get?name=WBStrain00051516
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:37980413
Synonyms: bli-1(e976) II
Notes: Supplementary_genotype bli-1(e976) II
Proper citation: RRID:WB-STRAIN:WBStrain00051516 Copy
http://www.wormbase.org/db/get?name=WBStrain00051503
Source Database: WormBase (WB)
Affected Genes: WBGene00006808(unc-76)
Genomic Alteration: WBGene00006808(unc-76)
Availability: unknown
Synonyms: enIs74 II; unc-76(e911) V.
Notes: enIs74 [mec-7p::GFP + dyn-1p::mfg-e8::mCherry + unc-76(+)] II. mec-7p::GFP labels touch neurons. MFG-E8::mCherry reporter binds exposed phosphatidylserine (PS) eat me signal on the surface of apoptotic or necrotic cells, providing a useful marker for identifying apoptotic or necrotic cells. Reference: Furuta Y, et al. PLoS Genet. 2021 Feb 11;17(2):e1009066.|"Made_by: Henry He"
Proper citation: RRID:WB-STRAIN:WBStrain00051503 Copy
http://www.wormbase.org/db/get?name=WBStrain00041355
Source Database: WormBase (WB)
Availability: available
Synonyms: Caenorhabditis wallacei wild isolate.
Alternate IDs: WB-STRAIN:JU1904, CGC_JU1904
Notes: Added Wild_Isolate tag as genotype info suggesting that they were sampled from the wild.|"Caenorhabditis sp. 16 25X inbred derivative of JU1873. Use for genome sequencing."|"Made_by: J-B. Pnigault"|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00041355 Copy
http://www.wormbase.org/db/get?name=WBStrain00041424
Source Database: WormBase (WB)
Availability: available
Synonyms: Caenorhabditis quiockensis wild isolate.
Alternate IDs: WB-STRAIN:JU2745, CGC_JU2745
Notes: Added Wild_Isolate tag as genotype info suggesting that they were sampled from the wild.|"Isolated from a rotting fruit sampled on 09 June 2014 by Fabrice Besnard in Guadeloupe (Basse Terre, 16.1761, -61.6951). Started with a plugged female."|"Made_by: Lise Frzal"|"Male-female strain. Isolated from a rotting fruit sampled on 09 June 2014 by Fabrice Besnard in Guadeloupe (Basse Terre, 16.1761, -61.6951). Started with a plugged female. Previously known as Caenorhabditis sp. 38."|"Non-elegans Strain"
Proper citation: RRID:WB-STRAIN:WBStrain00041424 Copy
http://www.wormbase.org/db/get?name=WBStrain00041967
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:31917826, PMID:38446031, PMID:39166513
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:OG1RF
Notes: Non-elegans Strain|"Reference WBPaper00059068 added based on published strain data identified by Textpresso literature search."
Proper citation: RRID:WB-STRAIN:WBStrain00041967 Copy
http://www.wormbase.org/db/get?name=WBStrain00041970
Source Database: WormBase (WB)
Availability: available
Source References: PMID:34607947
Synonyms: E. coli [ura-, strR, rnc-, (delta)attB::FRT-lacI-lacUV5p-T7).
Alternate IDs: WB-STRAIN:OP50(xu363), CGC_OP50(xu363)
Notes: Bacteria. RNAi-compatible OP50 strain. Slow growing. When growing this strain, pick single colonies for liquid culture (at least 20 hrs) from a freshly streaked tetracycline LB plate. Do not include tetracycline in liquid culture, as Tet in liquid culture can have long lasting effects on worm lifespan. The authors recommend using standard PEG transformation method to make competent OP50(xu363) cells, but other ways to make competent cells will also likely work for OP50(xu363). Reference: Xiao R, et al. Cell Rep. 2015 May 19;11(7):1123-33.|"No longer available from the CGC"|"Non-elegans Strain"|"WBStrain provided so WBPaper00060797 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061998 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00041970 Copy
http://www.wormbase.org/db/get?name=WBStrain00041978
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:31823826, PMID:31917826, PMID:32163353, PMID:33259473, PMID:33666644, PMID:33718883, PMID:33789349, PMID:33878133, PMID:33372828, PMID:34326342, PMID:36912545, PMID:37549461, PMID:37556491, PMID:37801396, PMID:38007141, PMID:38232128, PMID:37951422, PMID:38466732, PMID:38197647, PMID:38446031, PMID:38517909, PMID:38573858, PMID:38623070, PMID:38678555, PMID:38632209, PMID:38763511, PMID:38768031, PMID:38865452, PMID:38963038, PMID:38891110, PMID:39166513, PMID:39235964, PMID:39028454, PMID:39285192, PMID:39426950, PMID:39485281, PMID:39532199, PMID:39602305, PMID:39708289, PMID:39460939
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PA14
Notes: Non-elegans Strain|"Reference WBPaper00058956 added based on published strain data identified by Textpresso literature search."|"Reference WBPaper00059068 added based on published strain data identified by Textpresso literature search."|"WBStrain mapped, WBPaper00061220 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061409 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061436 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061527 added based on AFP_Strain data."|"WBStrain provided so WBPaper00061178 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061236 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061319 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061669 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061956 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00041978 Copy
http://www.wormbase.org/db/get?name=WBStrain00041972
Source Database: WormBase (WB)
Availability: available
Source References: PMID:33633573
Synonyms: E. coli.
Alternate IDs: WB-STRAIN:OP50-GFP, CGC_OP50-GFP
Notes: A strain of OP50 that contains a GFP plasmid (pFVP25.1) that is very fluorescent. Resistant to ampicillin. Originally published in Caenorhabditis elegans is a model host for Salmonella typhimurium. Labrousse A, Chauvet S, Couillault C, Kurz C, Ewbank J. Curr Biol. 2000 Nov 30;10(23):1543-5.|"Bacteria. A strain of OP50 that contains a GFP plasmid (pFPV25.1) that is very fluorescent. Resistant to ampicillin. Originally published in Caenorhabditis elegans is a model host for Salmonella typhimurium. Labrousse A, Chauvet S, Couillault C, Kurz C, Ewbank J. Curr Biol. 2000 Nov 30;10(23):1543-5."|"Non-elegans Strain"|"WBStrain provided so WBPaper00062052 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00041972 Copy
http://www.wormbase.org/db/get?name=WBStrain00042012
Source Database: WormBase (WB)
Affected Genes: WBGene00001860(him-1)
Genomic Alteration: WBGene00001860(him-1)
Availability: available
Synonyms: Oscheius tipulae him-1(sy527).
Alternate IDs: WB-STRAIN:PS2626, CGC_PS2626
Notes: Non-elegans Strain|"Recessive Him. Males mate. Parental strain Oscheius tipulae CEW1. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects. AKA Oscheius sp. 1."
Proper citation: RRID:WB-STRAIN:WBStrain00042012 Copy
http://www.wormbase.org/db/get?name=WBStrain00042002
Source Database: WormBase (WB)
Availability: available
Source References: PMID:8805221, PMID:19077305
Synonyms: Pristionchus pacificus wild isolate.
Alternate IDs: WB-STRAIN:PS312, CGC_PS312
Notes: Non-elegans Strain|"WT strain, Pristionchus pacificus. Hermaphroditic. See also WBPaper00002887. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."
Proper citation: RRID:WB-STRAIN:WBStrain00042002 Copy
http://www.wormbase.org/db/get?name=WBStrain00042085
Source Database: WormBase (WB)
Availability: available
Source References: PMID:31577950, PMID:32694842
Synonyms: E. coli [argA, lysA, mcrA, mcrB, IN(rrnD-rrnE)1, lambda-, rcn14::Tn10(DE3 lysogen::lavUV5 promoter -T7 polymerase].
Alternate IDs: WB-STRAIN:SLE1, CGC_SLE1
Notes: Bacteria. E. coli carrying pAG607 (orn-1 RNAi feeding vector) for SILAC. Arg-, Lys-, AmpR, TetR. argA, lysA, mcrA, mcrB, IN(rrnD-rrnE)1, lambda-, rnc14::Tn10(DE3 lysogen::lavUV5 promoter -T7 polymerase). Resistant to ampicillin and tetracycline. Reference: Larance M, et al. Nat Methods. 2011 Aug 28;8(10):849-51. Biosafety Level: BSL-1.|"Non-elegans Strain"|"Reference WBPaper00058667 added based on published strain data identified by Textpresso literature search."|"WBStrain mapped, WBPaper00061536 added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00042085 Copy
http://www.wormbase.org/db/get?name=WBStrain00042084
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33372828, PMID:39323014, PMID:38278957, PMID:37811492
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:SL1344
Notes: Non-elegans Strain|"WBStrain provided so WBPaper00061669 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00042084 Copy
http://www.wormbase.org/db/get?name=WBStrain00042063
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:28903981
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:RS2956
Notes: Non-elegans Strain
Proper citation: RRID:WB-STRAIN:WBStrain00042063 Copy
http://www.wormbase.org/db/get?name=WBStrain00042531
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004857(sma-3)
Genomic Alteration: WBGene00001864(him-5), WBGene00004857(sma-3)
Availability: available
Synonyms: sma-3(wk30) III; him-5(e1490) V; qcEx55.
Alternate IDs: WB-STRAIN:CS215, CGC_CS215
Notes: Generated based on CalTech XREF data|"No longer available from the CGC catalogue 24/04/2020"|"qcEx55 [vha-7p::GFP::sma-3 + rol-6(su1006)]. Rollers. Pick rollers to maintain. Array rescues body size phenotype. Reference: Wang J, Tokarz R, Savage-Dunn C. Development. 2002 Nov;129(21):4989-98."
Proper citation: RRID:WB-STRAIN:WBStrain00042531 Copy
http://www.wormbase.org/db/get?name=WBStrain00045179
Source Database: WormBase (WB)
Availability: unknown
Synonyms: EMPTY
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00045179 Copy
http://www.wormbase.org/db/get?name=WBStrain00045591
Source Database: WormBase (WB)
Availability: unknown
Synonyms: EMPTY
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00045591 Copy
http://www.wormbase.org/db/get?name=WBStrain00045615
Source Database: WormBase (WB)
Availability: unknown
Synonyms: EMPTY
Notes: Generated based on CalTech XREF data
Proper citation: RRID:WB-STRAIN:WBStrain00045615 Copy
http://www.wormbase.org/db/get?name=WBStrain00047070
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:24613396
Synonyms: blmp-1(tm548) I.
Notes: Batch Strain object requested via get_NS_ids.pl
Proper citation: RRID:WB-STRAIN:WBStrain00047070 Copy
http://www.wormbase.org/db/get?name=WBStrain00047111
Source Database: WormBase (WB)
Affected Genes: WBGene00000912(daf-16)
Genomic Alteration: WBGene00000912(daf-16)
Availability: unknown
Source References: PMID:34505574
Synonyms: daf-16(ot853[daf-16::linker::mNG::3xFlag::AID]) I.
Notes: Batch Strain object. This strain is detailed in micropub-biology-000210|"mNeonGreen tag inserted into endogenous daf-16 locus; AID at 3' end of mNeonGreen. Transgene can be degraded in a background expressing TIR1 co-factor and supplemented with auxin, allowing conditional knock-down of daf-16 expression. Reference: Bhattacharya et al. Cell. 2019 Feb 21;176(5):1174-1189.e16. PMID: 30686580"
Proper citation: RRID:WB-STRAIN:WBStrain00047111 Copy
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within NIF that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
