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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
SS.LEW-(D5Uia4-D5Mco10)/Jr Resource Report Resource Website |
RRID:RGD_728158 | Rattus norvegicus | SS.LEW-(D5Rat130-D5Mco10)/Jr was selectively bred for 2 generation to fix the chromosome and then backcrossed with SS strain | 728158 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728158 | 2026-08-29 11:49:20 | 0 | |||||
|
SHR.WKY-(D1Wox34-Sah)/Njs Resource Report Resource Website |
RRID:RGD_631590 | Rattus norvegicus | Congenic substrain derived by backcrossing congenic strain SHR.WKY-(D1Wox19-D1Wox34) to SHR | 631590 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631590 | 2026-08-29 11:49:20 | 0 | |||||
|
DA.E3-(D20Rat42-D20Rat49)/Rhd Resource Report Resource Website |
RRID:RGD_10002743 | Rattus norvegicus | A fragment containing MHC region from E3/ZtmRhd was introduced in DA/ZtmRhd by marker-assisted breeding and verified as pure congenic line after six generations of backcross to DA/ZtmRhd. | 10002743 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 10002743 | 2026-08-29 11:49:20 | 0 | |||||
|
WKY.SHRSP-(D1Rat200-D1Rat216)(Shbg-Atp1b2)/Bbb Resource Report Resource Website |
RRID:RGD_728139 | Rattus norvegicus | This double congenic strain was constructed by using the SHRSP strain as a donor strain to transfer the chromosome 1 Bp QTL to the chromosome 10 congenic strain in a cross between SHRSP and WKY.SHRSP-(Shbg-Atp1b2) to construct an F1 that was then backcrossed to the congenic WKY.SHRSP-(Shbg-Atp1b2) for more than 10 generations to construct the double congenic strain now homozygous for the SS Bp QTL alleles at both the chromosome 10 and chromosome 1 Bp QTLs | 728139 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728139 | 2026-08-29 11:49:20 | 0 | |||||
|
SS.LEW-(D10Rat27-Igfbp4)/Ayd Resource Report Resource Website |
RRID:RGD_724577 | Rattus norvegicus | A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. | 724577 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 724577 | 2026-08-29 11:49:21 | 0 | |||||
|
SS.LEW-(D3Chm64-D3Rat17)/Ayd Resource Report Resource Website |
RRID:RGD_731194 | Rattus norvegicus | A sub congenic strain derived from the progenitor strain SS.LEW-(D3Rat52-D3Rat17)/Ayd | 731194 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731194 | 2026-08-29 11:49:21 | 0 | |||||
|
DA.PVG-(D4Rat141-D4Mgh11) Resource Report Resource Website |
RRID:RGD_731193 | Rattus norvegicus | PVG allele is introgressed into the DA rats. Recombinant strains were derived from these which were used in further studies. | 731193 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731193 | 2026-08-29 11:49:21 | 0 | |||||
|
SHRSP.WKY-(D2Rat14-D2Mgh12)/Gcrc Resource Report Resource Website |
RRID:RGD_731191 | Rattus norvegicus | A segment of chromosome 2 containing blood pressure QTLs was transferred from WKY into SHRSP. | 731191 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 731191 | 2026-08-29 11:49:21 | 0 | |||||
|
DA.PVG.1AV1-(D4Rat155-D4Rat84) Resource Report Resource Website |
RRID:RGD_737857 | Rattus norvegicus | Congenic strain derived from marker assisted selection for PVG.1AV1 chromsome 4 alleles on the DA recipient strain. | 737857 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 737857 | 2026-08-29 11:49:20 | 0 | |||||
|
F344.DA-(D20Arb2-D20Arb8)/Arb Resource Report Resource Website |
RRID:RGD_1299880 | Rattus norvegicus | Region of interest was introgressed from DA/BklArb into F344/Hsd by eight to ten genotype guided backcrosses followed by minimum five intercrosses. | 1299880 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1299880 | 2026-08-29 11:49:20 | 0 | |||||
|
SS.LEW-(D5Wox3-D5Rat108)/Jr Resource Report Resource Website |
RRID:RGD_1299881 | Rattus norvegicus | SS.LEW-(D5Rat130-D5Rat108)/Jr was selectively backcrossed with the SS strain | 1299881 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1299881 | 2026-08-29 11:49:20 | 0 | |||||
|
RCS-rdy-+ Resource Report Resource Website |
RRID:RGD_728197 | Rattus norvegicus | This congenic strain is obtained from pink-eyed, tan-hooded RCS rats NIH Autoimmune Rat Model Repository and Development Center | 728197 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 728197 | 2026-08-29 11:49:20 | 0 | |||||
|
SS.LEW-(D5Mco34-D5Rat108)/Jr Resource Report Resource Website |
RRID:RGD_1299873 | Rattus norvegicus | SS.LEW-(D5Rat130-D5Rat108)/Jr was selectively backcrossed with the SS strain | 1299873 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 1299873 | 2026-08-29 11:49:21 | 0 | |||||
|
DA.F344-(D10Arb21-D10Arb22)/Arb Resource Report Resource Website |
RRID:RGD_631283 | Rattus norvegicus | This congenic substrain contains an F344 chromosome 10 segment transferred to a DA background. | 631283 | congenic | Rat Genome Database (RGD) | RGD | Extinct | 631283 | 2026-08-29 11:49:22 | 0 | |||||
|
F344.GK-(D1Arb42a-D1Rat90)/Swe Resource Report Resource Website |
RRID:RGD_631294 | Rattus norvegicus | This congenic strain carries a GK chromosome 1 segment defined by markers D1Arb42a and D1Rat90 transferred to the F344 background | 631294 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631294 | 2026-08-29 11:49:21 | 0 | |||||
|
SS.LEW-(D16Mit2-D16Rat12)/Ayd Resource Report Resource Website |
RRID:RGD_631585 | Rattus norvegicus | This congenic strain carries a LEW/NCrlBR chromosome 16 segment transferred to the SS/Jr background | 631585 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631585 | 2026-08-29 11:49:22 | 0 | |||||
|
SS.MNS-(D10M11Mit119-D10Mit11)/Jr Resource Report Resource Website |
RRID:RGD_631587 | Rattus norvegicus | This congenic strain is derived by introgressing a desired region of chr 10 from MNS to the SS/Jr recipient. | 631587 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 631587 | 2026-08-29 11:49:21 | 0 | |||||
|
SS.LEW-(D1Mco2-D1Mco35)/Jr Resource Report Resource Website |
RRID:RGD_734481 | Rattus norvegicus | SS rats were crossed with LEW and the F1 rats were backcrossed to SS. Heterozygous rats with the chromosomal region of interest were selected and backcrossed for the next generation. This was done for eight generations and then the heterozygous animals were intercrossed. A 118 cM fragment of LEW chr 1 was introgressed into SS background. | 734481 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 734481 | 2026-08-29 11:49:22 | 0 | |||||
|
SS.LEW-(D1Rat42-D1Wox10)/Jr Resource Report Resource Website |
RRID:RGD_734483 | Rattus norvegicus | This is a congenic substrain derived from SS.LEW-(D1Mco2-D1Mco35)/Jr. A 43 cM fragment of LEW chr 1 was introgressed into SS background. | 734483 | congenic | Rat Genome Database (RGD) | RGD | Unknown | 734483 | 2026-08-29 11:49:22 | 0 | |||||
|
F344.OLETF-(D7Mgh16-D7Mgh20)/Tj Resource Report Resource Website |
RRID:RGD_1302654 | Rattus norvegicus | Male OLETF was crossed with female F344. F1 were backcrossed to female F344 for 5 generations. Microsatellite-based genotyping was performed to select the best male that had the best OLETF donor genome. Once the region was fixed the resultant congenic strain was maintained by brother-sister mating.26.6 cM segment of the OLETF genome was transferred. National BioResource Project for the Rat in Japan | 1302654 | congenic | Rat Genome Database (RGD) | RGD | Cryopreserved Embryo | 1302654 | 2026-08-29 11:49:22 | 0 |
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