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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00062915
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: dvIs62 X.
Notes: dvIs62 [snb-1p::hTDP-43/3' long UTR + mtl-2p::GFP] X. Temperature-sensitive. Maintain at 16C to minimize selection against transgene. [NOTE: Out-crossing has eliminated embryonic lethality seen in parental strain CL6049 when raised at 25C.] Uncoordinated from hatching; phenotype is stronger at higher temperatures. Intestinal GFP expression. Parental strain CL6049 out-crossed 6x to N2. Reference: Koopman M, et al. MicroPubl Biol. 2023 Apr 19:2023:10.17912/micropub.biology.000766. doi: 10.17912/micropub.biology.000766. eCollection 2023. PMID: 37151213.|"Made_by: E.A. Nollen"
Proper citation: RRID:WB-STRAIN:WBStrain00062915 Copy
http://www.wormbase.org/db/get?name=WBStrain00062879
Source Database: WormBase (WB)
Affected Genes: WBGene00016558(pks-1)
Genomic Alteration: WBGene00016558(pks-1)
Availability: unknown
Source References: EMPTY
Synonyms: pks-1(ot1489[pks-1::SL2::GFP::H2B]) X.
Notes: GFP::H2B tag inserted into endogenous pks-1 locus via CRISPR/Cas9 engineering. Reference: Cao WX, et al. (2024). bioRxiv: 2024.2006.2011.598534. https:|"Made_by: Daniel Merritt (Hobert Lab)"
Proper citation: RRID:WB-STRAIN:WBStrain00062879 Copy
http://www.wormbase.org/db/get?name=WBStrain00062912
Source Database: WormBase (WB)
Affected Genes: WBGene00006766(unc-30)
Genomic Alteration: WBGene00006766(unc-30)
Availability: unknown
Source References: EMPTY
Synonyms: unc-30(ns959[unc-30::GFP::degron]) IV.
Notes: Linker with GFP tag and degron inserted at the C terminus of the endogenous unc-30 locus. GFP expression in ASG, AVJ, DD, VD, and PVP neurons and GLR glia. Reference: Stefanakis N, et al. 2024 Feb 15. doi: 10.1038/s44318-024-00049-w. PMID: 38360995.
Proper citation: RRID:WB-STRAIN:WBStrain00062912 Copy
http://www.wormbase.org/db/get?name=WBStrain00062913
Source Database: WormBase (WB)
Affected Genes: WBGene00002601(let-381)
Genomic Alteration: WBGene00002601(let-381)
Availability: unknown
Source References: EMPTY
Synonyms: let-381(ns995[let-381::gfp::degron]) I.
Notes: Linker with GFP tag and degron inserted at the C terminus of the endogenous let-381 locus. GFP expression in GLR glia, HMC and coelomocytes. Reference: Stefanakis N, et al. 2024 Feb 15. doi: 10.1038/s44318-024-00049-w. PMID: 38360995.
Proper citation: RRID:WB-STRAIN:WBStrain00062913 Copy
http://www.wormbase.org/db/get?name=WBStrain00062918
Source Database: WormBase (WB)
Affected Genes: WBGene00001072(dpy-10)
Genomic Alteration: WBGene00001072(dpy-10)
Availability: unknown
Source References: EMPTY
Synonyms: rpl-33(cc2558)/mIn1 [dpy-10(e128) mIs14] II.
Notes: Balancer recombination happens frequently at 23-25C, strain must be maintained at 16-20C. Homozygous lethal mutation balanced by Dpy- and myo-2p::GFP-marked inversion. Heterozygotes are wild-type with pharyngeal GFP signal, and segregate wild-type GFP+, Dpy bright GFP+ (mIn1 homozygotes), and non-GFP rpl-33(cc2558) homozygotes. Pick wild-type GFP+ to maintain. cc5998 is an engineered mutation creating an early stop (R9*). Presumptive rpl-33 null. Heterozygous rpl-33(cc2558)/mIn1 animals are delayed in development. Check for proper segregation of progeny. Reference: Cenik ES, et al. Dev Cell. 2019 Mar 25;48(6):811-826.e6. doi: 10.1016/j.devcel.2019.01.019. PMID: 30799226.|"Made_by: Elif Sarinay Cenik/ Agustian Surya"
Proper citation: RRID:WB-STRAIN:WBStrain00062918 Copy
http://www.wormbase.org/db/get?name=WBStrain00062919
Source Database: WormBase (WB)
Affected Genes: WBGene00004492(rps-23)
Genomic Alteration: WBGene00004492(rps-23)
Availability: unknown
Source References: EMPTY
Synonyms: rps-23(cc5994)/tmC5 [F36H1.3(tmIs1220)] IV.
Notes: Balancer recombination happens frequently at 23-25C, strain must be maintained at 16-20C. Homozygous lethal mutation balanced by myo-2p::Venus-marked inversion. Heterozygotes are wild-type with somewhat dimmer Venus signal and segregate WT Venus(+) heterozygotes, Mec Unc Venus(+) tmC5 homozygotes, and non-Venus rps-23(cc5994) homozygotes (L1 arrest). Pick wild-type Venus(+) and check for proper segregation of progeny to maintain. cc5994 is an engineered mutation creating an early stop (A67*). Presumptive rps-23 null. Heterozygous rps-23(cc5994)/tmC5 animals are delayed in development. Check for proper segregation of progeny. Reference: Cenik ES, et al. Dev Cell. 2019 Mar 25;48(6):811-826.e6. doi: 10.1016/j.devcel.2019.01.019. PMID: 30799226.|"Made_by: Elif Sarinay Cenik/Agustian Surya"
Proper citation: RRID:WB-STRAIN:WBStrain00062919 Copy
http://www.wormbase.org/db/get?name=WBStrain00062916
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: dvIs15.
Notes: dvIs15 [unc-54(vector) + mtl-2::GFP]. Control strain for OW1601. Phenotype apparently Wild-type. Parental strain CL2122 out-crossed 6x to N2. Reference: Koopman M, et al. MicroPubl Biol. 2023 Apr 19:2023:10.17912/micropub.biology.000766. doi: 10.17912/micropub.biology.000766. eCollection 2023. PMID: 37151213.|"Made_by: E.A. Nollen"
Proper citation: RRID:WB-STRAIN:WBStrain00062916 Copy
http://www.wormbase.org/db/get?name=WBStrain00062870
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: unknown
Source References: EMPTY
Synonyms: pha-1 (e2123) III; otEx8199.
Notes: Made_by: Robert Aguilar|"otEx8199 [sshk-1p::GFP + pha-1(+)]. Maintain at 25C. 370 bp of promoter directly upstream of sshk-1 fused to GFP. Reference: Aguilar GR, et al. PLoS Biol. 2025 Jan 6;23(1):e3002979. doi: 10.1371/journal.pbio.3002979. PMID: 39761329"
Proper citation: RRID:WB-STRAIN:WBStrain00062870 Copy
http://www.wormbase.org/db/get?name=WBStrain00062873
Source Database: WormBase (WB)
Affected Genes: WBGene00013914(lgc-37)
Genomic Alteration: WBGene00013914(lgc-37)
Availability: unknown
Source References: EMPTY
Synonyms: Cbr-lgc-37(ot1475[Cbr-lgc-37::T2A::mScarlet3::H2B]) III.
Notes: Made_by: Itai Toker|"T2A::mScarlet3::H2B tag inserted before STOP codon of endogenous Cbr-lgc-37 locus using CRISPR/Cas9. Generated in C. briggsae AF16 background. Reference: Toker IA, et al. bioRxiv 2024.11.23.624988; doi: https:"
Proper citation: RRID:WB-STRAIN:WBStrain00062873 Copy
http://www.wormbase.org/db/get?name=WBStrain00062874
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: otIs913 V.
Notes: otIs913 [pha-4(prom2)::daf-2(DN)::eBFP2::tbb-2 3 UTR + unc-122p::mCherry::unc-54 3' UTR] V. daf-2(DN) encodes a dominant negative form of the DAF-2 protein, causing inhibition of the insulin receptor DAF-2. pha-4(prom2) drives expression of daf-2(DN) in all 22 enteric neurons (20 pharyngeal neurons, AVL and DVB), RIS and PVT. The multicopy array was inserted at the oxTi553 landing site using the Fluorescent Landmark Interference (FLInt) method. Reference: Sural S, et al. bioRxiv 2025.01.06.631508; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00062874 Copy
http://www.wormbase.org/db/get?name=WBStrain00062878
Source Database: WormBase (WB)
Affected Genes: WBGene00016558(pks-1)
Genomic Alteration: WBGene00016558(pks-1)
Availability: unknown
Source References: EMPTY
Synonyms: pks-1(ot1488[pks-1::SL2::mScarlet-I3::H2B]) X.
Notes: Made_by: Daniel Merritt (Hobert Lab)|"SL2::mScarlet-I3::H2B tag inserted into endogenous pks-1 locus via CRISPR/Cas9 engineering. Reference: Cao WX, et al. (2024). bioRxiv: 2024.2006.2011.598534. https:"
Proper citation: RRID:WB-STRAIN:WBStrain00062878 Copy
http://www.wormbase.org/db/get?name=WBStrain00062875
Source Database: WormBase (WB)
Affected Genes: WBGene00306126(cone-1)
Genomic Alteration: WBGene00306126(cone-1)
Availability: unknown
Source References: EMPTY
Synonyms: cone-1(ot1485[*syb5500[cone-1::oxGFP]]) III.
Notes: Made_by: Michael Cesar|"syb5500 is an oxGFP tag inserted at the C-terminus of the endogenous cone-1 locus by CRISPR. ot1485 is an early stop codon introduced into exon 3 of the endogenously-tagged cone-1 locus. Pan-neuronal nuclear GFP expression. Please contact Oliver Hobert prior to publishing work using this strain."
Proper citation: RRID:WB-STRAIN:WBStrain00062875 Copy
http://www.wormbase.org/db/get?name=WBStrain00062876
Source Database: WormBase (WB)
Affected Genes: WBGene00000464(ceh-44)
Genomic Alteration: WBGene00000464(ceh-44)
Availability: unknown
Source References: EMPTY
Synonyms: ceh-44(ot1486[*ot1015[ceh-44::gfp]]) III.
Notes: Made_by: Michael Cesar|"ot1015 is a GFP tag inserted at the C-terminus of the endogenous ceh-44 locus by CRISPR. ot1468 is an early stop codon introduced into exon 3 of the endogenously-tagged ceh-44 locus. Pan-neuronal nuclear GFP expression. Please contact Oliver Hobert prior to publishing work using this strain."
Proper citation: RRID:WB-STRAIN:WBStrain00062876 Copy
http://www.wormbase.org/db/get?name=WBStrain00062904
Source Database: WormBase (WB)
Affected Genes: WBGene00006543(tbx-2)
Genomic Alteration: WBGene00006543(tbx-2)
Availability: unknown
Source References: EMPTY
Synonyms: tbx-2(cu37[tbx-2::TY1::GFP::FLAG *bx59]) III.
Notes: Made_by: Akshaya Rajaraman|"TY1::EGFP::3xFLAG tag inserted in frame at stop codon of the endogenous mutant tbx-2(bx59) coding sequence by CRISPR/Cas9 genome editing. Maintain at 15C. Lethal at 25C."
Proper citation: RRID:WB-STRAIN:WBStrain00062904 Copy
http://www.wormbase.org/db/get?name=WBStrain00062868
Source Database: WormBase (WB)
Affected Genes: WBGene00000464(ceh-44)
Genomic Alteration: WBGene00000464(ceh-44)
Availability: unknown
Source References: EMPTY
Synonyms: ceh-44(ot1447[*ot1015[ceh-44::gfp]]) III.
Notes: Made_by: Michael Cesar|"ot1015 is a GFP tag inserted at the C-terminus of the endogenous ceh-44 locus by CRISPR. ot1447 is a deletion removing exon 5 of the endogenously-tagged ceh-44 locus. No pan-neuronal nuclear GFP expression. Please contact Oliver Hobert prior to publishing work using this strain."
Proper citation: RRID:WB-STRAIN:WBStrain00062868 Copy
http://www.wormbase.org/db/get?name=WBStrain00062907
Source Database: WormBase (WB)
Affected Genes: WBGene00020808(clik-1)
Genomic Alteration: WBGene00020808(clik-1)
Availability: unknown
Source References: EMPTY
Synonyms: clik-1(kt1[clik-1::gfp]) V.
Notes: GFP tag inserted into endogenous clik-1 locus. CLIK-1::GFP is expressed in body wall muscle, vulval muscle, and myoepithelial sheath of the somatic gonad and co-localized with actin filaments. Reference: Ono S & Ono K. J Biol Chem. (2020) 295(34):12014-12027. PMID: 32554465
Proper citation: RRID:WB-STRAIN:WBStrain00062907 Copy
http://www.wormbase.org/db/get?name=WBStrain00062905
Source Database: WormBase (WB)
Affected Genes: WBGene00001073(dpy-11)|WBGene00006782(unc-46)|WBGene00017430(bcl-11)
Genomic Alteration: WBGene00001073(dpy-11), WBGene00006782(unc-46), WBGene00017430(bcl-11)
Availability: unknown
Source References: EMPTY
Synonyms: bcl-11(cu10)/unc-46(e177) dpy-11(e224) V.
Notes: Made_by: Tomas Vilimas|"Pick wild-type to maintain. Heterozygotes are wild-type and should segregate wild-type heterozygotes, bcl-11 homozygotes (L1 larval arrest with starved appearance), and Dpy Unc homozygotes (Medium Dpy, Shrinker, poor backing). Maintain by picking wild-type and scoring for proper segregation of progeny. bcl-11 homozygotes have weak pharyngeal muscle contractions and pharyngeal lumen fails to open. cu10 is a 555 bp deletion (V:6360921..6361460). Predicted bcl-11 null allele. Reference: Vilimas, Tomas. (2004). Genes regulating ceh-22 and pharyngeal development of Caenorhabditis elegans.. University of Illinois at Chicago. Thesis. https:"
Proper citation: RRID:WB-STRAIN:WBStrain00062905 Copy
http://www.wormbase.org/db/get?name=WBStrain00062906
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: cuEx467.
Notes: cuEx467 [ser-7::GFP + rol-6(su1006)]. Pick Rollers to maintain. Expresses GFP exclusively in the M4 pharyngeal neuron. Reference: Ray P, et al. Dev Neurobiol. 2008 68(4): p. 421-33. PMID 18161854.
Proper citation: RRID:WB-STRAIN:WBStrain00062906 Copy
http://www.wormbase.org/db/get?name=WBStrain00062862
Source Database: WormBase (WB)
Affected Genes: WBGene00000453(ceh-32)
Genomic Alteration: WBGene00000453(ceh-32)
Availability: unknown
Source References: EMPTY
Synonyms: Cbr-ceh-32(ot1431[Cbr-ceh-32::GFP]) V.
Notes: C-terminal GFP tag inserted before STOP codon of endogenous Cbr-ceh-32 locus using CRISPR/Cas9. Generated in C. briggsae AF16 background. Reference: Toker IA, et al. bioRxiv 2024.11.23.624988; doi: https:|"Made_by: Itai Toker"
Proper citation: RRID:WB-STRAIN:WBStrain00062862 Copy
http://www.wormbase.org/db/get?name=WBStrain00062860
Source Database: WormBase (WB)
Affected Genes: WBGene00013665(hlh-32)
Genomic Alteration: WBGene00013665(hlh-32)
Availability: unknown
Source References: EMPTY
Synonyms: hlh-32(ot1347) IV.
Notes: CRISPR/Cas9-engineered 1691 bp deletion removing entire hlh-32 locus; similar to syb6773 deletion. Reference: Aguilar GR, et al. PLoS Biol. 2025 Jan 6;23(1):e3002979. doi: 10.1371/journal.pbio.3002979. PMID: 39761329|"Made_by: Robert Aguilar"
Proper citation: RRID:WB-STRAIN:WBStrain00062860 Copy
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