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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx976[NSM-specific tph-1p::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062190 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx976[NSM-specific tph-1p::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062190 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx977[ADF-specific srh-142p::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062191 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEx977[ADF-specific srh-142p::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062191 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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ijmSi31[mex-5p::mCherry::his-11::tbb-2 3'UTR] II; daf-2(e1370)III; rrIs67[rgef-1p::HA::gfp::rab-7::rab-7 3'UTR + unc-119(+)]IV Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062182 | Caenorhabditis elegans | ijmSi31[mex-5p::mCherry::his-11::tbb-2 3'UTR] II; daf-2(e1370)III; rrIs67[rgef-1p::HA::gfp::rab-7::rab-7 3'UTR + unc-119(+)]IV | EMPTY | WB-STRAIN:WBStrain00062182 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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lin-12(ljf31[lin-12::mNeonGreen[C1]::3xFLAG]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062221 | Caenorhabditis elegans | lin-12(ljf31[lin-12::mNeonGreen[C1]::3xFLAG]) III. | Made_by: Ariel Pani|"mNG and 3xFLAG tags fused to the C-terminal end of the intracellular domain of the endogenous lin-12 locus using a 9 amino acid flexible linker. Reference: Pani AM, et al. A new toolkit to visualize and perturb endogenous LIN-12/Notch signaling in C. elegans. MicroPubl Biol. 2022 Jul 28;2022:10.17912/micropub.biology.000603. doi: 10.17912/micropub.biology.000603. PMID: 35966394." | WBGene00003001(lin-12) | WBGene00003001(lin-12) | WB-STRAIN:WBStrain00062221 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:48 | 0 | ||||
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cosa-1(viz154[GFP::cosa-1])III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062225 | Caenorhabditis elegans | cosa-1(viz154[GFP::cosa-1])III. | GFP tag inserted at N-terminus of endogenous cosa-1 locus. Expressed primarily in both hermaphrodite and male gonad. Reference: Ortega J, et al. Sci. Adv.10,eadp0466(2024).DOI:10.1126/sciadv.adp0466 https:|"Made_by: Jacob Ortega" | WBGene00022172(cosa-1) | WBGene00022172(cosa-1) | WB-STRAIN:WBStrain00062225 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:48 | 0 | ||||
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prg-1(viz142[V5::mCherry::GSIGSLRSI::prg-1] viz146[PAZ deletion]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062223 | Caenorhabditis elegans | prg-1(viz142[V5::mCherry::GSIGSLRSI::prg-1] viz146[PAZ deletion]) I. | 282bp deletion (247aa-345aa) in PAZ domain of endogenously-tagged prg-1 locus. V5 epitope and mCherry tags with a flexible linker inserted after the first 18 nt of the coding sequence of endogneous prg-1 locus. mCherry tagged PRG-1 primarily expressed and localized in both hermaphrodite and male gonad. Reference: Ortega J, et al. Sci. Adv.10,eadp0466(2024).DOI:10.1126/sciadv.adp0466 https:|"Made_by: Jacob Ortega" | WBGene00004178(prg-1) | WBGene00004178(prg-1) | WB-STRAIN:WBStrain00062223 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:48 | 0 | ||||
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nhr-8(ok186) IV; acEx187. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062228 | Caenorhabditis elegans | nhr-8(ok186) IV; acEx187. | acEx187 [vha-6p::nhr-8::SL2::GFP + rol-6(su1006)]. Pick Rollers to maintain (GFP expression in intestine is easy to see and might be easier to score than Rol). Intestinal rescue of nhr-8(ok186) mutants. Reference: Otarigho B & Aballay A. 2020. iScience. 2020 May 22;23(5):101068. doi: 10.1016/j.isci.2020.101068. PMID: 32361270.|"Made_by: Benson Otarigho" | WBGene00003607(nhr-8) | WBGene00003607(nhr-8) | WB-STRAIN:WBStrain00062228 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:48 | 0 | ||||
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daf-2(e1370)III; rrEx958[tsp-7p::tsp-7::gfp::tsp-7 3'UTR; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062180 | Caenorhabditis elegans | daf-2(e1370)III; rrEx958[tsp-7p::tsp-7::gfp::tsp-7 3'UTR; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062180 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEX920[tph-1p::tbc-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062172 | Caenorhabditis elegans | daf-2(e1370) aak-1(tm1944)III; tbc-7(rr166) aak-2(ok524)X; rrEX920[tph-1p::tbc-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062172 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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daf-7(e1372)III; rrEx917[rgef-1::HA::gfp::rab-7; sur-5::NeoR; rgef-1::ollas::tsp-7; rgef-1::3xFLAG::mKate; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062171 | Caenorhabditis elegans | daf-7(e1372)III; rrEx917[rgef-1::HA::gfp::rab-7; sur-5::NeoR; rgef-1::ollas::tsp-7; rgef-1::3xFLAG::mKate; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062171 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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juSi164 unc-119(ed3) III; wtfIs263. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062210 | Caenorhabditis elegans | juSi164 unc-119(ed3) III; wtfIs263. | juSi164 [mex-5p::HIS-72::miniSOG + Cbr-unc-119(+)] III. wtfIs263 [rab-3p::AI::ChR2(H134R)::unc-54 3'UTR + rab-3p::AI::Voltron::unc-54 3'UTR + rab-3p::his-24::tagBFP::unc-54 3'UTR]. Keep plates covered to avoid unnecessary exposure to light. Pan-neuronal expression of ChR2 (H134R) along with Voltron volatage indicator and nuclear-localized tagBFP. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00062210 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||
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daf-2(e1370)III; mkcIs13[sun-1p::rde-1::sun-1 3'UTR + unc-119(+)]II; rde-1(mck36)V; rrEx931[rgef-1p::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062175 | Caenorhabditis elegans | daf-2(e1370)III; mkcIs13[sun-1p::rde-1::sun-1 3'UTR + unc-119(+)]II; rde-1(mck36)V; rrEx931[rgef-1p::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062175 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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juSi164 unc-119(ed3) III; wtfIs335. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062213 | Caenorhabditis elegans | juSi164 unc-119(ed3) III; wtfIs335. | juSi164 [mex-5p::HIS-72::miniSOG + Cbr-unc-119(+)] III. wtfIs335 [5xQUAS+(delta)pes-10p::AI::eTsChR::unc-54 3'UTR + rab-3p::AI::QF+hGR::SL2::tagBFP::unc-54 3'UTR + rab-3p::his-24::tagRFP::unc-54 3'UTR + rab-3p::his-24::GCaMP6s::unc-54 3'UTR]. Keep plates covered to avoid unnecessary exposure to light. Pan-neuronal eTsChR on activation using dex treatment via QF+hGR. Worms also express calcium sensing fluorescence protein- GCaMP6s in nuclei of each neurons. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00062213 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||
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wtfEx478. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062214 | Caenorhabditis elegans | wtfEx478. | wtfEx478 [rab-3p::AI::lite-1G::SL2::tagBFP::unc-54 3'UTR + unc-122p::GFP]. Pick GFP+ animals to maintain. Worms express purple/violet light-sensitive optogenetic protein LITE-1 pan-neuronallly and nuclear-localized blue fluorescent protein tagBFP via SL2 trans-slpicing regulatory sequence. Worms also express GFP in coelomocytes. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WB-STRAIN:WBStrain00062214 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||||
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juSi164 unc-119(ed3) III; wtfEx296. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062211 | Caenorhabditis elegans | juSi164 unc-119(ed3) III; wtfEx296. | juSi164 [mex-5p::HIS-72::miniSOG + Cbr-unc-119(+)] III. wtfEx296 [rab-3p::AI::gur-3G::unc-54 3'UTR + rab-3p::AI::prdx-2G::SL2::his-24::tagRFP::unc-54 3'UTR + rab-3p::his-24::GCaMP6s::unc-54 3'UTR]. Pick RFP+ to maintain. Keep plates covered to avoid unnecessary exposure to light. Worms expressing a purple light-sensitive optogenetic protein system: pan-neuronal expression of GUR-3 and PRDX-2 with nuclear-localized tagRFP and GCaMP6s. Reporter construct contains an artificial intron (AI). Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WBGene00006843(unc-119) | WBGene00006843(unc-119) | WB-STRAIN:WBStrain00062211 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||
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daf-2(e1370)III; rrEx957[rgef-1p::mKate::T2A::gfp::rab-7; rol-6] line 1 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062179 | Caenorhabditis elegans | daf-2(e1370)III; rrEx957[rgef-1p::mKate::T2A::gfp::rab-7; rol-6] line 1 | EMPTY | WB-STRAIN:WBStrain00062179 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 | |||||
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wtfIs491. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062216 | Caenorhabditis elegans | wtfIs491. | Made_by: Anuj Sharma & Kevin Chen|"wtfIs491 [inx-1p::twk-18(gf)::mCherry + unc-122p::RFP]. AIB(-) activated potassium channel. Expression of twk-18 gain-of-function mutant in AIB neurons causes permanent inhibition. RFP expression in coelomocytes. Reference: Chen KS, et al. Olfactory learning alters navigation strategies and behavioral variability in C. elegans. ArXiv, Feb 23:arXiv:2311.07117v2. PMID: 38013890." | WB-STRAIN:WBStrain00062216 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||||
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wtfIs145. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062208 | Caenorhabditis elegans | wtfIs145. | wtfIs145 [rab-3p::his-24::GCaMP6s::unc-54 3'UTR + pha-1(+)]. Pan-neuronal expression of nuclear-localized GCaMP6s. Reference: Sharma AK, et al. Genetics 2024 May 11:iyae077. doi: 10.1093/genetics/iyae077 PMID: 38733622. | WB-STRAIN:WBStrain00062208 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||||
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otIs669 V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062209 | Caenorhabditis elegans | otIs669 V. | Derived by out-crossing parental strain OH15262 an additional six times to N2. Out-crossed strain AML318 seems healthier than parental strain when maintaining long-term under normal conditions (AML observed an increase in male and sterile progeny in parental strain in successive generations.) otIs669 [UPN::NLS::TagRFP-T + acr-5::NLS::mTagBFP2::H2B + flp-1::NLS::mTagBFP2::H2B + flp-6::NLS::mTagBFP2::H2B + flp-18::NLS::mTagBFP2::H2B + flp-19::NLS::mTagBFP2::H2B + flp-26::NLS::mTagBFP2::H2B + gcy-18::NLS::mTagBFP2::H2B + ggr-3::NLS::mTagBFP2::H2B + lim-4::NLS::mTagBFP2::H2B + pdfr-1::NLS::mTagBFP2::H2B + srab-20::NLS::mTagBFP2::H2B + unc-25::NLS::mTagBFP2::H2B + cho-1::NLS::CyOFP1::H2B + flp-13::NLS::CyOFP1::H2B + flp-20::NLS::CyOFP1::H2B + gcy-36::NLS::CyOFP1::H2B + gpa-1::NLS::CyOFP1::H2B + nlp-12::NLS::CyOFP1::H2B + nmr-1::NLS::CyOFP1::H2B + ocr-1::NLS::CyOFP1::H2B + osm-9::NLS::CyOFP1::H2B + srh-79::NLS::CyOFP1::H2B + sri-1::NLS::CyOFP1::H2B + srsx-3::NLS::CyOFP1::H2B + unc-8::NLS::CyOFP1::H2B + acr-2::NLS::mNeptune2.5 + ceh-2::NLS::mNeptune2.5 + dat-1::NLS::mNeptune2.5 + dhc-3::NLS::mNeptune2.5 + eat-4::NLS::mNeptune2.5 + flp-3::NLS::mNeptune2.5 + gcy-35::NLS::mNeptune2.5 + glr-1::NLS::mNeptune2.5 + gcy-21::NLS::CyOFP1::H2B::T2A::NLS::mTagBFP2::H2B + klp-6::NLS::mNeptune2.5::T2A::NLS::CyOFP1::H2B + lim-6::NLS::mNeptune2.5::T2A::NLS::CyOFP1::H2B + mbr-1::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B + mec-3::NLS::CyOFP1::H2B::T2A::NLS::mTagBFP2::H2B + odr-1::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B + srab-20::NLS::mNeptune2.5::T2A::NLS::mTagBFP2::H2B] V. UPN (Ultra Pan-Neuronal) promoter contains four short pan-neuronal promoters fused together (unc-11::rgef-1::ehs-1::ric-19). NeuroPAL (Neuronal Polychromatic Atlas of Landmarks) transgene used to resolve unique neural identities in whole-brain images. Reference: Yemini E, et al. Cell. 2021 Jan 7;184(1):272-288.e11. PMID: 33378642. | WB-STRAIN:WBStrain00062209 | WormBase (WB) | WB | unknown | 2026-08-15 09:40:47 | 0 | ||||||
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rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) aak-1(tm1944) unc-119(ed3)III; aak-2(ok524)X; oxEx1678 Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00062161 | Caenorhabditis elegans | rrIs62[pie-1p::his-15::gfp::3xmir-51::tbb-2 3UTR]II; unc-119(+)II; daf-2(e1370) aak-1(tm1944) unc-119(ed3)III; aak-2(ok524)X; oxEx1678 | EMPTY | WB-STRAIN:WBStrain00062161 | WormBase (WB) | WB | unknown | PMID:39392750 | 2026-08-15 09:40:47 | 0 |
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