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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00028831
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC1049
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00028831 Copy
http://www.wormbase.org/db/get?name=WBStrain00028990
Source Database: WormBase (WB)
Affected Genes: WBGene00004682(rsd-3)
Genomic Alteration: WBGene00004682(rsd-3)
Availability: available
Source References: EMPTY
Synonyms: rsd-3(pk2013) X.
Alternate IDs: WB-STRAIN:NL2013, CGC_NL2013
Notes: mut-6 background|"Resistant to feeding dsRNA."
Proper citation: RRID:WB-STRAIN:WBStrain00028990 Copy
http://www.wormbase.org/db/get?name=WBStrain00028986
Source Database: WormBase (WB)
Affected Genes: WBGene00001680(gpb-2)
Genomic Alteration: WBGene00001680(gpb-2)
Availability: available
Source References: EMPTY
Synonyms: gpb-2(pk751) I.
Alternate IDs: WB-STRAIN:NL2001, CGC_NL2001
Notes: Flanking sequence: AGTCACTCTT - deletion - GAAGACTACT.
Proper citation: RRID:WB-STRAIN:WBStrain00028986 Copy
http://www.wormbase.org/db/get?name=WBStrain00028978
Source Database: WormBase (WB)
Affected Genes: WBGene00003507(mut-14)
Genomic Alteration: WBGene00003507(mut-14)
Availability: available
Source References: EMPTY
Synonyms: mut-14(pk738)
Alternate IDs: WB-STRAIN:NL1838, CGC_NL1838
Notes: Mutator strain. TS. RNAi defect. TATTCTGGAC A AAGCTGATAA.
Proper citation: RRID:WB-STRAIN:WBStrain00028978 Copy
http://www.wormbase.org/db/get?name=WBStrain00028994
Source Database: WormBase (WB)
Affected Genes: WBGene00004508(rrf-1)
Genomic Alteration: WBGene00004508(rrf-1)
Availability: available
Source References: PMID:31717869, PMID:32943454, PMID:33289480, PMID:33319173, PMID:33594200, PMID:34449775
Synonyms: rrf-1(pk1417) I.
Alternate IDs: WB-STRAIN:NL2098, CGC_NL2098
Notes: Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"Homozygous rrf-1 deletion allele. RNAi interference for genes expressed in somatic tissue is lost in rrf-1 deletion mutants."|"Mutagen:UV/TMP"|"Reference WBPaper00058851 added based on published strain data identified by Textpresso literature search."|"WBStrain mapped, WBPaper00060738 added based on AFP_Strain data."|"WBStrain provided so WBPaper00060343 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00060797 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061852 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00028994 Copy
http://www.wormbase.org/db/get?name=WBStrain00028933
Source Database: WormBase (WB)
Affected Genes: WBGene00001673(gpa-11)
Genomic Alteration: WBGene00001673(gpa-11)
Availability: available
Source References: PMID:10192394
Synonyms: gpa-11(pk349) II.
Alternate IDs: WB-STRAIN:NL787, CGC_NL787
Notes: Made_by:|"Mutagen:UV/TMP"
Proper citation: RRID:WB-STRAIN:WBStrain00028933 Copy
http://www.wormbase.org/db/get?name=WBStrain00029034
Source Database: WormBase (WB)
Affected Genes: WBGene00004094(ppw-2)
Genomic Alteration: WBGene00004094(ppw-2)
Availability: available
Source References: EMPTY
Synonyms: ppw-2(pk1673) I.
Alternate IDs: WB-STRAIN:NL5117, CGC_NL5117
Notes: Made_by J. van Wolfswinkel
Proper citation: RRID:WB-STRAIN:WBStrain00029034 Copy
http://www.wormbase.org/db/get?name=WBStrain00029035
Source Database: WormBase (WB)
Availability: available
Source References: PMID:31940482, PMID:32966472, PMID:32371398, PMID:33178678, PMID:37103980, PMID:37197200, PMID:37726773, PMID:37957360, PMID:38253120, PMID:38688913, PMID:38755164, PMID:38817211, PMID:39133842, PMID:39186478, PMID:39418305, PMID:39439404
Synonyms: pkIs2386 [unc-54p::alpha-synnuclein::YFP + unc-119(+)]
Alternate IDs: WB-STRAIN:NL5901, CGC_NL5901
Notes: pkIs2386 [unc-54p::alphasynuclein::YFP + unc-119(+)]. YFP expression in the muscles. unc-119 was in the background, but it may have been crossed out.|"Reference WBPaper00059117 added based on published strain data identified by Textpresso literature search."|"Supplementary_genotype"|"Supplementary_genotype (Punc-54::alpha-synuclein::YFP + unc-119)"|"Supplementary_genotype pkIs2386 [unc-54p::alphasynuclein::YFP +unc-119(+)]"|"WBStrain mapped, WBPaper00060404 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00060977 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061004 added based on AFP_Strain data."|"[2022-04-11T18:09:46.653Z WBPerson324] Kill Strain: In order to recreate with genotype information"|"[2022-04-11T18:10:40.583Z WBPerson324] Ressurect Strain: Genotype: pkIs2386 [unc-54p::alpha-synnuclein::YFP + unc-119(+)]"
Proper citation: RRID:WB-STRAIN:WBStrain00029035 Copy
http://www.wormbase.org/db/get?name=WBStrain00029037
Source Database: WormBase (WB)
Affected Genes: WBGene00004921(snt-1)
Genomic Alteration: WBGene00004921(snt-1)
Availability: available
Source References: PMID:33570571, PMID:40226510
Synonyms: snt-1(md290) II.
Alternate IDs: WB-STRAIN:NM204, CGC_NM204
Notes: Properties Mutagen Spontaneous in RM25|"snt-1 encodes the C. elegans homolog of synaptotagmin I. md290 is a deletion that removes most of the coding sequence. Strain is a slow growing aldicarb resistant (Ric) Unc. Males won't mate."
Proper citation: RRID:WB-STRAIN:WBStrain00029037 Copy
http://www.wormbase.org/db/get?name=WBStrain00029100
Source Database: WormBase (WB)
Affected Genes: WBGene00010191(dmsr-1)
Genomic Alteration: WBGene00010191(dmsr-1)
Availability: available
Source References: EMPTY
Synonyms: dmsr-1(qn45) V.
Alternate IDs: WB-STRAIN:NQ915, CGC_NQ915
Notes: Made_by: Mike Iannacone|"Pumps and moves 30 minutes after 30-minute 35 deg heat shock. Derived by outcrossing NQ792 to remove transgene. Reference: Iannacone M, et al. eLife 2017."
Proper citation: RRID:WB-STRAIN:WBStrain00029100 Copy
http://www.wormbase.org/db/get?name=WBStrain00029063
Source Database: WormBase (WB)
Affected Genes: WBGene00004830(slo-1)
Genomic Alteration: WBGene00004830(slo-1)
Availability: available
Source References: PMID:38719808
Synonyms: slo-1(js379) V.
Alternate IDs: WB-STRAIN:NM1968, CGC_NM1968
Notes: Jerky locomotion. Sensitive to aldicarb.
Proper citation: RRID:WB-STRAIN:WBStrain00029063 Copy
http://www.wormbase.org/db/get?name=WBStrain00029061
Source Database: WormBase (WB)
Affected Genes: WBGene00006750(unc-10)
Genomic Alteration: WBGene00006750(unc-10)
Availability: available
Source References: PMID:37053235
Synonyms: unc-10(md1117) X.
Alternate IDs: WB-STRAIN:NM1657, CGC_NM1657
Notes: Uncoordinated and aldicarb resistant. Molecular lesion: deletion of entire unc-10 coding region. Gene encodes C. elegans homolog of Rab3 interacting molecule. Will mate, but poorly.
Proper citation: RRID:WB-STRAIN:WBStrain00029061 Copy
https://www.mmrrc.org/catalog/sds.php?mmrrc_id=37788
Source Database: Mutant Mouse Resource and Research Center (MMRRC)
Genetic Background: Targeted Mutation
Affected Genes: Sun2
Source References: PMID: 21677750
Alternate IDs: MMRRC_37788-UCD, MMRRC_037788, MMRRC_37788
Notes: Research areas: ; Mutation Type: Targeted Mutation ; Collection: BaSH EUCOMM
Proper citation: RRID:MMRRC_037788-UCD Copy
https://www.mmrrc.org/catalog/sds.php?mmrrc_id=37822
Source Database: Mutant Mouse Resource and Research Center (MMRRC)
Genetic Background: Targeted Mutation
Affected Genes: Dapk1
Source References: PMID: 21677750
Alternate IDs: MMRRC_37822-UCD, MMRRC_037822, MMRRC_37822
Notes: Research areas: ; Mutation Type: Targeted Mutation ; Collection: BaSH EUCOMM
Proper citation: RRID:MMRRC_037822-UCD Copy
https://www.mmrrc.org/catalog/sds.php?mmrrc_id=37785
Source Database: Mutant Mouse Resource and Research Center (MMRRC)
Genetic Background: Targeted Mutation
Affected Genes: Smdt1
Source References: PMID: 21677750
Alternate IDs: MMRRC_37785-UCD, MMRRC_037785, MMRRC_37785
Notes: Research areas: ; Mutation Type: Targeted Mutation ; Collection: BaSH EUCOMM
Proper citation: RRID:MMRRC_037785-UCD Copy
https://www.mmrrc.org/catalog/sds.php?mmrrc_id=37780
Source Database: Mutant Mouse Resource and Research Center (MMRRC)
Genetic Background: Targeted Mutation
Affected Genes: Skic2
Source References: PMID: 21677750
Alternate IDs: MMRRC_37780-UCD, MMRRC_037780, MMRRC_3778
Notes: Research areas: ; Mutation Type: Targeted Mutation ; Collection: BaSH EUCOMM
Proper citation: RRID:MMRRC_037780-UCD Copy
https://www.mmrrc.org/catalog/sds.php?mmrrc_id=38349
Source Database: Mutant Mouse Resource and Research Center (MMRRC)
Genetic Background: chemically induced mutation
Affected Genes: Atp6v1h|Cracdl|Unc80|Gli2|Cd55|Mybph|BC034090|Mettl13|Mcm10|Ly75|Lin7c|Or4k37|Helz2|Gm12887|Fzd1|Sema3a|Ccdc146|Slit2|Slc4a4|Ephx4|Fbxo21|Plxna1|Frmd4b|A2ml1|Grin2b|Itpr2|Ccdc61|Or51ah3|Or52e18|Dennd5a|Spn|Cfap96|Ucp1|Cacna1a|Dop1a|Slc22a5|Nf1|Slfn10|Plcd3|Vsnl1|Rps6ka5|Bcl11b|Qng1|Zfp457|Zdhhc11|Cdk7|Rarb|Nefm|Scube1|Grin2a|Tbccd1|Runx1|Itpr3|Phf8l|Or2j3|Morn2|Slc25a45|Cox8a|Slc15a3
Alternate IDs: MMRRC_38349-MU, MMRRC_038349, MMRRC_38349
Notes: Research areas: ; Mutation Type: chemically induced mutation ; Collection: Beutler Mutagenetix
Proper citation: RRID:MMRRC_038349-MU Copy
http://www.wormbase.org/db/get?name=WBStrain00062586
Source Database: WormBase (WB)
Affected Genes: WBGene00002246(lag-2)|WBGene00003001(lin-12)
Genomic Alteration: WBGene00002246(lag-2), WBGene00003001(lin-12)
Availability: unknown
Source References: EMPTY
Synonyms: cshIs140 II; lin-12(ljf33[lin-12::mNeonGreen[C1]::loxP::3xFLAG::AID*]) III; lag-2(bmd202[lag-2::P2A::H2B::mTurquoise2::lox511i::2xHA]) V.
Notes: cshIs140 [rpl-28p::TIR1(F79G)::T2A::mCherry::HIS-11] II. Allows for conditional degradation of endogenous LIN-12 using 5-Ph-IAA. Reference: Pani AM, et al. A new toolkit to visualize and perturb endogenous LIN-12/Notch signaling in C. elegans. MicroPubl Biol. 2022 Jul 28;2022:10.17912/micropub.biology.000603. doi: 10.17912/micropub.biology.000603. PMID: 35966394.|"Made_by: Theresa Gibney and Taylor Medwig-Kinney"
Proper citation: RRID:WB-STRAIN:WBStrain00062586 Copy
http://www.wormbase.org/db/get?name=WBStrain00062723
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: E. coli [MG1655 bioB::kan].
Notes: Biotin auxotrophic E. coli strain is kan resistant and grows fine on LB. This mutant strain produces significantly less biotin and can therefore be used to reduce background in TurboID experiments. Also known as MG1655 bioB::kan and STL110 (J. Cronen, U. of Illinois). References: Sanchez AD & Feldman JL. STAR Protoc. 2021 Dec 2;2(4):100986. doi: 10.1016/j.xpro.2021.100986. PMID: 34927095. Ortega-Cuellar D., et al. J Nutrigenet Nutrigenomics. 2010;3(1):18-30. doi: 10.1159/000318054. PMID: 20798549|"Made_by: Ortega-Cuellar et al., 2010"
Proper citation: RRID:WB-STRAIN:WBStrain00062723 Copy
http://www.wormbase.org/db/get?name=WBStrain00063213
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: wyIs592 III.
Notes: wyIs592 [ser-2(prom3)::myr::GFP + odr-1p::RFP] III. Fluorescent PVD- and FLP-specific morphology markers. Reference: Eichel K, et al. Nature. 2022 Sep;609(7925):128-135. PMID: 35978188.
Proper citation: RRID:WB-STRAIN:WBStrain00063213 Copy
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