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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00039535
Source Database: WormBase (WB)
Availability: available
Source References: PMID:38177158
Synonyms: Whole-genome sequenced strain.
Alternate IDs: WB-STRAIN:VC40556, CGC_VC40556
Notes: Made_by: Vancouver KO Group|"Million Mutation Project strain. This strain was isolated after EMS+ENU mutagenesis of VC2010, propagated clonally through F10 to drive mutations to homozygosity, and subjected to whole-genome sequencing. It is homozygous for a large number of mutations determined from sequence data. It may also carry large copy number variations that are not homozygous. Alleles numbered between gk100000 and gk962522 are homozygous; those numbered from gk962523 up should be assumed to be non-homozygous. A graphical representation of these large copy number differences can be seen in the Plot section for each strain on the MMP web site ( URL: genome.sfu.ca/mmp/)."|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00039535 Copy
http://www.wormbase.org/db/get?name=WBStrain00027977
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369, PMID:38865452
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:MY795
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.|"species identified with species specific primers"
Proper citation: RRID:WB-STRAIN:WBStrain00027977 Copy
http://www.wormbase.org/db/get?name=WBStrain00028491
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369, PMID:38865452
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:MY2573
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.|"species identified with species specific primers"
Proper citation: RRID:WB-STRAIN:WBStrain00028491 Copy
http://www.wormbase.org/db/get?name=WBStrain00028699
Source Database: WormBase (WB)
Affected Genes: WBGene00000426(ced-12)
Genomic Alteration: WBGene00000426(ced-12)
Availability: available
Source References: PMID:33759761
Synonyms: ced-12(k149) I.
Alternate IDs: WB-STRAIN:NF87, CGC_NF87
Notes: Cell corpses persist as unengulfed, refractile dics. DTC mismigrates. Sequenced: point mutation R38>STOP, probably a null.|"WBStrain provided so WBPaper00061198 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00028699 Copy
http://www.wormbase.org/db/get?name=WBStrain00028651
Source Database: WormBase (WB)
Affected Genes: WBGene00000044(acr-5)
Genomic Alteration: WBGene00000044(acr-5)
Availability: available
Source References: PMID:38338915
Synonyms: acr-5(ok180) III.
Alternate IDs: WB-STRAIN:NC293, CGC_NC293
Notes: Made_by: Von Stetina/D Miller|"No obvious phenotype. 2 kb deletion of acr-5 produced by Moulder/Barstead at OMRF. Deletion removes all 4 transmembrane domains. This is likely a null allele. Left breakpoint sequence (includes repeated sequence): TTTTTAATTATCCGTAATTTTTTAATTATCCGTAAT. Right breakpoint sequence: AACATCTTTAATCGATTTAT."
Proper citation: RRID:WB-STRAIN:WBStrain00028651 Copy
http://www.wormbase.org/db/get?name=WBStrain00028646
Source Database: WormBase (WB)
Affected Genes: WBGene00001079(dpy-20)
Genomic Alteration: WBGene00001079(dpy-20)
Availability: available
Source References: EMPTY
Synonyms: wdIs4 II; dpy-20(e1282) IV.
Alternate IDs: WB-STRAIN:NC197, CGC_NC197
Notes: Made_by: Lickteig/Ross/Miller|"wdIs4 [unc-4::GFP + dpy-20(+)] II. Slightly Unc. GFP expression mosaic, occasional DA axon guidance defects. Embryonic expression: I5, DA, SABS; L1: AVF, VA; Late L3: VC. Early L1: GFP bright in I5, SABs, DA8/9, dim in DA1."
Proper citation: RRID:WB-STRAIN:WBStrain00028646 Copy
http://www.wormbase.org/db/get?name=WBStrain00028632
Source Database: WormBase (WB)
Affected Genes: WBGene00012767(fcd-2)
Genomic Alteration: WBGene00012767(fcd-2)
Availability: available
Source References: PMID:33262405
Synonyms: fcd-2(tm1298) IV.
Alternate IDs: WB-STRAIN:NB105, CGC_NB105
Notes: Homozygotes are viable, but are hypersensitive to DNA crosslinks.|"Mutagen:UV/TMP"|"Reference WBPaper00060693 added based on published strain data identified by Textpresso literature search."
Proper citation: RRID:WB-STRAIN:WBStrain00028632 Copy
http://www.wormbase.org/db/get?name=WBStrain00028701
Source Database: WormBase (WB)
Affected Genes: WBGene00003248(mig-17)
Genomic Alteration: WBGene00003248(mig-17)
Availability: available
Source References: PMID:38177158
Synonyms: mig-17(k174) V.
Alternate IDs: WB-STRAIN:NF198, CGC_NF198
Notes: Distal tip cell migration defective.
Proper citation: RRID:WB-STRAIN:WBStrain00028701 Copy
http://www.wormbase.org/db/get?name=WBStrain00028751
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)
Genomic Alteration: WBGene00001864(him-5)
Availability: available
Source References: PMID:26024448, PMID:38177158
Synonyms: him-5(e1490) V; gmIs5.
Alternate IDs: WB-STRAIN:NG2517, CGC_NG2517
Notes: gmIs5 [ina-1::GFP + rol-6(su1006)]. Rollers. ina-1(gm86) may still be in the background.
Proper citation: RRID:WB-STRAIN:WBStrain00028751 Copy
http://www.wormbase.org/db/get?name=WBStrain00028742
Source Database: WormBase (WB)
Affected Genes: WBGene00002081(ina-1)
Genomic Alteration: WBGene00002081(ina-1)
Availability: available
Source References: PMID:9247263, PMID:33759761, PMID:38177158
Synonyms: ina-1(gm144) III.
Alternate IDs: WB-STRAIN:NG144, CGC_NG144
Notes: Pvul, occasional lateral vulvae. CAN migration defective.|"WBStrain provided so WBPaper00061198 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00028742 Copy
http://www.wormbase.org/db/get?name=WBStrain00028734
Source Database: WormBase (WB)
Affected Genes: WBGene00001328(epi-1)
Genomic Alteration: WBGene00001328(epi-1)
Availability: available
Source References: PMID:38177158, PMID:38302462
Synonyms: epi-1(gm57) IV.
Alternate IDs: WB-STRAIN:NG57, CGC_NG57
Notes: Unc. Small Broods. Wit.
Proper citation: RRID:WB-STRAIN:WBStrain00028734 Copy
http://www.wormbase.org/db/get?name=WBStrain00028733
Source Database: WormBase (WB)
Affected Genes: WBGene00004786(sex-1)
Genomic Alteration: WBGene00004786(sex-1)
Availability: available
Source References: PMID:9823896
Synonyms: sex-1(gm41) X.
Alternate IDs: WB-STRAIN:NG41, CGC_NG41
Notes: Egl. Dpy.
Proper citation: RRID:WB-STRAIN:WBStrain00028733 Copy
http://www.wormbase.org/db/get?name=WBStrain00028781
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC166
Notes: Isotype: NIC166|"Reference_strain: True"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028781 Copy
http://www.wormbase.org/db/get?name=WBStrain00028866
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:38177158
Synonyms: unc-119(ed4) III; qyIs127.
Alternate IDs: WB-STRAIN:NK696, CGC_NK696
Notes: qyIs127 [lam-1p::lam-1::mCherry + unc-119(+)] V. Reference: Ihara S, et al. Nat Cell Biol. 2011 Jun;13(6):641-51.|"qyIs127 [lam-1p::lam-1::mCherry + unc-119(+)]. Likely integrated on IV or V. Reference: Ihara S, et al. Nat Cell Biol. 2011 Jun;13(6):641-51."
Proper citation: RRID:WB-STRAIN:WBStrain00028866 Copy
http://www.wormbase.org/db/get?name=WBStrain00028900
Source Database: WormBase (WB)
Affected Genes: WBGene00001665(gpa-3)
Genomic Alteration: WBGene00001665(gpa-3)
Availability: available
Source References: PMID:9055081, PMID:38396085
Synonyms: gpa-3(pk35) V.
Alternate IDs: WB-STRAIN:NL335, CGC_NL335
Notes: Reduced response to exogenously added dauer pheromone and thus defective in the regulation of dauer formation.
Proper citation: RRID:WB-STRAIN:WBStrain00028900 Copy
http://www.wormbase.org/db/get?name=WBStrain00028861
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:34407398, PMID:38177158
Synonyms: unc-119(ed4) III; qyIs43.
Alternate IDs: WB-STRAIN:NK358, CGC_NK358
Notes: qyIs43 [pat-3::GFP + ina-1(genomic) + unc-119(+)]. Superficially wild-type. Maintain under normal conditions. Reference: Hagedorn et al., Dev Cell (2009) Aug 17(2):187-98.|"WBStrain provided so WBPaper00061805 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00028861 Copy
http://www.wormbase.org/db/get?name=WBStrain00028855
Source Database: WormBase (WB)
Affected Genes: WBGene00001366(exc-5)
Genomic Alteration: WBGene00001366(exc-5)
Availability: available
Source References: EMPTY
Synonyms: exc-5(rh232) IV.
Alternate IDs: WB-STRAIN:NJ731, CGC_NJ731
Notes: Formation of large round cysts in the excretory canal. The cysts begin to form shortly before hatching and is penetrant. The cysts grow in size throughout larval and adult stages, and can be lethal. The cysts form primarily at the canal tips. Some of the larger cysts may be visible by low power microscopy. Slight variable defects in the tail whip. Impenetrant distal tip cell migration defects (Mig).
Proper citation: RRID:WB-STRAIN:WBStrain00028855 Copy
http://www.wormbase.org/db/get?name=WBStrain00028884
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:38177158
Synonyms: unc-119(ed4) III; qyIs161.
Alternate IDs: WB-STRAIN:NK860, CGC_NK860
Notes: qyIs161 [emb-9p::emb-9::dendra + unc-119(+)]. Reference: Ihara S, et al. Nat Cell Biol. 2011 Jun;13(6):641-51.|"qyIs161 [emb-9p::emb-9::Dendra + unc-119(+)]. Reference: Ihara S, et al. Nat Cell Biol. 2011 Jun;13(6):641-51."
Proper citation: RRID:WB-STRAIN:WBStrain00028884 Copy
http://www.wormbase.org/db/get?name=WBStrain00028816
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:37008729, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC277
Notes: Isolated in Parc de Valrose|"Isotype: NIC277"|"Reference_strain: True"|"Sequenced: True"
Proper citation: RRID:WB-STRAIN:WBStrain00028816 Copy
http://www.wormbase.org/db/get?name=WBStrain00028817
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:33820969, PMID:38564369
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:NIC501
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00028817 Copy
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