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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00032118
Source Database: WormBase (WB)
Affected Genes: WBGene00019993(rbx-2)
Genomic Alteration: WBGene00019993(rbx-2)
Availability: available
Source References: EMPTY
Synonyms: rbx-2(ok1617) I.
Alternate IDs: WB-STRAIN:RB1420, CGC_RB1420
Notes: Made_by: OMRF Knockout Group|"R10A10.2. Homozygous. Outer Left Sequence: CATCTCCACGAGCACTGAAA. Outer Right Sequence: AACAGACGGAAAACGACCAG. Inner Left Sequence: CGGTGGAAAAACTCTGGAAA. Inner Right Sequence: CGTCTCCTCCGAAATTGAAA. Inner Primer PCR Length: 2101 bp. Deletion Size: 759 bp."|"This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032118 Copy
http://www.wormbase.org/db/get?name=WBStrain00032122
Source Database: WormBase (WB)
Availability: available
Source References: PMID:33216250
Synonyms: Y37A1C.1a(ok1621) IV.
Alternate IDs: WB-STRAIN:RB1424, CGC_RB1424
Notes: Made_by: OMRF Knockout Group|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."|"WBStrain mapped, WBPaper00060638 added based on AFP_Strain data."|"Y37A1C.1a Homozygous. Outer Left Sequence: cgccggatttccactaagta. Outer Right Sequence: gtgacgcttgtgacgagaaa. Inner Left Sequence: aaagtgacgagagccgagaa. Inner Right Sequence: ggcttcacgtgctaaaggag. Inner Primer PCR Length: 3196. Estimated Deletion Size: about 400 bp."
Proper citation: RRID:WB-STRAIN:WBStrain00032122 Copy
http://www.wormbase.org/db/get?name=WBStrain00032127
Source Database: WormBase (WB)
Affected Genes: WBGene00012084(npr-15)
Genomic Alteration: WBGene00012084(npr-15)
Availability: available
Source References: PMID:38446031
Synonyms: T27D1.3(ok1626) III.
Alternate IDs: WB-STRAIN:RB1429, CGC_RB1429
Notes: Made_by: OMRF Knockout Group|"no longer available from the CGC."|"T27D1.3 Homozygous. Outer Left Sequence: tgccctgttgtataccgtga. Outer Right Sequence: agcggcttcaacagacattt. Inner Left Sequence: aatcagttgggatcaccgag. Inner Right Sequence: acctttcccctactgtgcct. Inner Primer PCR Length: 2710. Estimated Deletion Size: about 900 bp."|"This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use."
Proper citation: RRID:WB-STRAIN:WBStrain00032127 Copy
http://www.wormbase.org/db/get?name=WBStrain00029089
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: unc-119(ed3) III; cdIs66.
Alternate IDs: WB-STRAIN:NP871, CGC_NP871
Notes: cdIs66 [pcc1::GFP::rab-7 + myo-2p::GFP + unc-119(+)]. GFP::rab-7 expressed in front of coelomocyte promoter.|"cdIs66 [pcc1::GFP::rab-7 + unc-119(+) + myo-2::GFP]. GFP::rab-7 expressed in front of coelomocyte promoter."
Proper citation: RRID:WB-STRAIN:WBStrain00029089 Copy
http://www.wormbase.org/db/get?name=WBStrain00029002
Source Database: WormBase (WB)
Affected Genes: WBGene00004093(ppw-1)
Genomic Alteration: WBGene00004093(ppw-1)
Availability: available
Source References: PMID:33289480, PMID:37865119, PMID:39331715
Synonyms: ppw-1(pk2505) I.
Alternate IDs: WB-STRAIN:NL2550, CGC_NL2550
Notes: ppw-1 animals are resistant to feeding of ds RNA directed against germline genes. Multiple polymorphisms in C18E3.7 including a single base deletion in ppw-1 resulting in an early stop codon.|"WBStrain mapped, WBPaper00060738 added based on AFP_Strain data."|"WBStrain provided so WBPaper00060797 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00029002 Copy
http://www.wormbase.org/db/get?name=WBStrain00029088
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:39418305
Synonyms: unc-119(ed3) III; cdIs54.
Alternate IDs: WB-STRAIN:NP822, CGC_NP822
Notes: cdIs54 [pcc1::MANS::GFP + myo-2p::GFP + unc-119(+)]. Ballistic transformation. Mannosidasell::GFP (Golgi marker) expressed in front coelomocyte promoter.|"cdIs54 [pcc1::MANS::GFP + unc-119(+) + myo-2::GFP]. Ballistic transformation. Mannosidasell::GFP (Golgi marker) expressed in front coelomocyte promoter."
Proper citation: RRID:WB-STRAIN:WBStrain00029088 Copy
http://www.wormbase.org/db/get?name=WBStrain00029075
Source Database: WormBase (WB)
Affected Genes: WBGene00004121(ptrn-1)
Genomic Alteration: WBGene00004121(ptrn-1)
Availability: available
Source References: EMPTY
Synonyms: jsIs973 III; oxIs12 ptrn-1(tm5597) X.
Alternate IDs: WB-STRAIN:NM4422, CGC_NM4422
Notes: jsIs973[mec-7p::mRFP + unc-119(+)] III. oxIs12 [unc-47p::GFP + lin-15(+)] X. oxIs12 integration maps at +2.0 on X. Strong RFP cytosolic marker for mechanosensory neurons (Zheng et al. 2011, PMID 21115607). Expression of GFP in all GABAergic neurons.|"Mutagen:TMP+UV"|"Mutagen:TMP/UV"
Proper citation: RRID:WB-STRAIN:WBStrain00029075 Copy
http://www.wormbase.org/db/get?name=WBStrain00029014
Source Database: WormBase (WB)
Affected Genes: WBGene00002016(hsp-16.2)
Genomic Alteration: WBGene00002016(hsp-16.2)
Availability: available
Source References: EMPTY
Synonyms: pkIs1605.
Alternate IDs: WB-STRAIN:NL3401, CGC_NL3401
Notes: pkIs1605 [hsp-16.2p::GFP::LacZ + rol-6(su1006)]. Rollers.
Proper citation: RRID:WB-STRAIN:WBStrain00029014 Copy
http://www.wormbase.org/db/get?name=WBStrain00029015
Source Database: WormBase (WB)
Affected Genes: WBGene00004093(ppw-1)
Genomic Alteration: WBGene00004093(ppw-1)
Availability: available
Source References: PMID:31717869, PMID:32943454, PMID:36176234, PMID:37865119
Synonyms: ppw-1(pk1425) I.
Alternate IDs: WB-STRAIN:NL3511, CGC_NL3511
Notes: Mutagen:UV/TMP|"ppw-1 animals are resistant to feeding of ds RNA directed against germline genes. The genomic region that is deleted: nt 2479-3982 of C18E3 (intragenic deletion in C18E3.7). This strain was formerly called NL2557."|"Reference WBPaper00058851 added based on published strain data identified by Textpresso literature search."|"Supplementary_genotype [ppw1(pk1425)"|"WBStrain provided so WBPaper00060343 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00029015 Copy
http://www.wormbase.org/db/get?name=WBStrain00029092
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: unc-119(ed3) III; cdIs85.
Alternate IDs: WB-STRAIN:NP941, CGC_NP941
Notes: cdIs85 [pcc1::2xFYVE::GFP + myo-2p::GFP + unc-119(+)]. Ballistic transformation. 2xFYVE(Hrs)::GFP expressed in front coelomocyte promoter.|"cdIs85 [pcc1::2xFYVE::GFP + unc-119(+) + myo-2::GFP]. Ballistic transformation. 2xFYVE(Hrs)::GFP expressed in front coelomocyte promoter."
Proper citation: RRID:WB-STRAIN:WBStrain00029092 Copy
http://www.wormbase.org/db/get?name=WBStrain00029166
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)
Genomic Alteration: WBGene00001864(him-5)
Availability: available
Source References: EMPTY
Synonyms: ynIs66 IV; him-5(e1490) V.
Alternate IDs: WB-STRAIN:NY2066, CGC_NY2066
Notes: ynIs66 [flp-7p::GFP].
Proper citation: RRID:WB-STRAIN:WBStrain00029166 Copy
http://www.wormbase.org/db/get?name=WBStrain00029168
Source Database: WormBase (WB)
Availability: available
Source References: PMID:37155851
Synonyms: ynIs72.
Alternate IDs: WB-STRAIN:NY2072, CGC_NY2072
Notes: ynIs72 [flp-1p::GFP].
Proper citation: RRID:WB-STRAIN:WBStrain00029168 Copy
http://www.wormbase.org/db/get?name=WBStrain00029169
Source Database: WormBase (WB)
Availability: available
Source References: PMID:37416472
Synonyms: ynIs78.
Alternate IDs: WB-STRAIN:NY2078, CGC_NY2078
Notes: ynIs78 [flp-8p::GFP].
Proper citation: RRID:WB-STRAIN:WBStrain00029169 Copy
http://www.wormbase.org/db/get?name=WBStrain00029158
Source Database: WormBase (WB)
Affected Genes: WBGene00001456(flp-13)
Genomic Alteration: WBGene00001456(flp-13)
Availability: available
Source References: PMID:37980357
Synonyms: ynIs37 III.
Alternate IDs: WB-STRAIN:NY2037, CGC_NY2037
Notes: Supplementary_genotype ynIs37|"ynIs37 [flp-13p::GFP]."
Proper citation: RRID:WB-STRAIN:WBStrain00029158 Copy
http://www.wormbase.org/db/get?name=WBStrain00029189
Source Database: WormBase (WB)
Affected Genes: WBGene00000254(bli-4)|WBGene00004085(pph-4.1)
Genomic Alteration: WBGene00000254(bli-4), WBGene00004085(pph-4.1)
Availability: available
Source References: EMPTY
Synonyms: pph-4.1(tm1598) III/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III).
Alternate IDs: WB-STRAIN:OC271, CGC_OC271
Notes: Homozygous sterile mutation balanced by bli-4- and GFP-marked translocation. Heterozygotes are WT with pharyngeal GFP signal, and segregate WT GFP, arrested hT2 aneuploids, and non-GFP tm1598 homozygotes (produce ~100% dead eggs, slightly higher penetrance at 25C). Homozygous hT2[bli-4 let-? qIs48] inviable. Pick WT GFP and check for correct segregation of progeny to maintain. Reference: Peters N, et al., J Cell Sci. 2010 Mar 1;123(Pt 5):795-805.|"Mutagen:TMP+UV"|"Mutagen:TMP/UV"
Proper citation: RRID:WB-STRAIN:WBStrain00029189 Copy
http://www.wormbase.org/db/get?name=WBStrain00029103
Source Database: WormBase (WB)
Affected Genes: WBGene00003012(lin-26)|WBGene00004323(rde-1)
Genomic Alteration: WBGene00003012(lin-26), WBGene00004323(rde-1)
Availability: available
Source References: PMID:33033182, PMID:33319173, PMID:33673074, PMID:34321666, PMID:34496255, PMID:37577954, PMID:37722055, PMID:38740431, PMID:39284915
Synonyms: rde-1(ne219) V; kzIs9.
Alternate IDs: WB-STRAIN:NR222, CGC_NR222
Notes: Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"kzIs9 [(pKK1260) lin-26p::NLS::GFP + (pKK1253) lin-26p::rde-1 + rol-6(su1006)]. Rollers. Hypodermis specific RNAi."|"WBStrain mapped, WBPaper00061131 added based on AFP_Strain data."|"WBStrain provided so WBPaper00060487 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00060797 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061750 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00061894 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00029103 Copy
http://www.wormbase.org/db/get?name=WBStrain00029196
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:37254647
Synonyms: unc-119(ed3) III; ocfIs5.
Alternate IDs: WB-STRAIN:OCF22, CGC_OCF22
Notes: Made_by: Daphna Joseph-Straus|"ocfIs5 [pie-1p::mCherry::npp-1::pie-1 3'UTR + unc119(+)]. Reference: Joseph-Strauss D, et al. Dev Biol. 2012 May 15;365(2):445-57."
Proper citation: RRID:WB-STRAIN:WBStrain00029196 Copy
http://www.wormbase.org/db/get?name=WBStrain00029198
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: PMID:37995185
Synonyms: unc-119(ed3) III; ltIs1.
Alternate IDs: WB-STRAIN:OD1, CGC_OD1
Notes: ltIs1[pIC22; pie-1 promoter::knl-3::GFP + unc-119(+)].|"Mutagen:biolistic particle bombardment"|"Supplementary_genotype GFP-KNL-3; ltIs1[pIC22; pie-1 promoter:knl-3:GFP + unc-119(+)]"|"WBStrain mapped, WBPaper00060328 added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00029198 Copy
http://www.wormbase.org/db/get?name=WBStrain00029107
Source Database: WormBase (WB)
Affected Genes: WBGene00003012(lin-26)|WBGene00004323(rde-1)
Genomic Alteration: WBGene00003012(lin-26), WBGene00004323(rde-1)
Availability: available
Source References: PMID:33319173, PMID:34449775, PMID:37577954, PMID:37722055
Synonyms: rde-1(ne219) V; kzIs20.
Alternate IDs: WB-STRAIN:NR350, CGC_NR350
Notes: Generated from papers flagged positive during the last month for data type afp_strain/other_strain.|"kzIs20 [hlh-1p::rde-1 + sur-5p::NLS::GFP]. Muscle specific RNAi. kzIs20 genotype differs from published data; this information is correct per Hiroshi Qadota."|"WBStrain provided so WBPaper00061852 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00029107 Copy
http://www.wormbase.org/db/get?name=WBStrain00029137
Source Database: WormBase (WB)
Affected Genes: WBGene00000100(ajm-1)|WBGene00001864(him-5)|WBGene00004047(plx-1)
Genomic Alteration: WBGene00000100(ajm-1), WBGene00001864(him-5), WBGene00004047(plx-1)
Availability: available
Source References: EMPTY
Synonyms: plx-1(ev724) jcIs1 IV; him-5(e1490) V.
Alternate IDs: WB-STRAIN:NW1615, CGC_NW1615
Notes: jcIs1 [ajm-1::GFP + unc-29(+) + rol-6(su1006)] IV. ajm-1 was formerly known as jam-1 (Junction Associated Protein) and the gene encoding the antigen recognized by the monoclonal antibody MH27. jcIs1 consists of pJS191, C45D3 and pRF4. Reference: Koppen M, et al. Nat Cell Biol. 2001 Nov;3(11):983-91.|"Mutagen:UV/Frmaldehyde"
Proper citation: RRID:WB-STRAIN:WBStrain00029137 Copy
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