Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00029568
Source Database: WormBase (WB)
Affected Genes: WBGene00001950(hlh-3)
Genomic Alteration: WBGene00001950(hlh-3)
Availability: available
Source References: PMID:20439776
Synonyms: hlh-3(ot354) II; otIs173 III.
Alternate IDs: WB-STRAIN:OH9330, CGC_OH9330
Notes: otIs173 [F25B3.3::DsRed2 + ttx-3promB::GFP] III. Whole genome sequenced strain. Reference: Sarin S, et al., Genetics. 2010 Jun;185(2):417-30.
Proper citation: RRID:WB-STRAIN:WBStrain00029568 Copy
http://www.wormbase.org/db/get?name=WBStrain00029601
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; otEx4553.
Alternate IDs: WB-STRAIN:OH10248, CGC_OH10248
Notes: otEx4553 [unc-64(fosmid; isoform B)::SL2::NLS::YFP::H2B + pha-1(+)]. Maintain at 25C to select for array. Ubiquitous nuclear YFP expression. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029601 Copy
http://www.wormbase.org/db/get?name=WBStrain00029569
Source Database: WormBase (WB)
Affected Genes: WBGene00006654(ttx-3)
Genomic Alteration: WBGene00006654(ttx-3)
Availability: available
Source References: PMID:20439776
Synonyms: ttx-3(ot358).
Alternate IDs: WB-STRAIN:OH9331, CGC_OH9331
Notes: Whole genome sequenced strain.
Proper citation: RRID:WB-STRAIN:WBStrain00029569 Copy
http://www.wormbase.org/db/get?name=WBStrain00029521
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: zdIs13 IV; otEx3155.
Alternate IDs: WB-STRAIN:OH7236, CGC_OH7236
Notes: zdIs13 [tph-1p::GFP] IV. otEx3155 [dpy-7p::hif-1(p621A) + ttx-3::RFP]. Line 2.
Proper citation: RRID:WB-STRAIN:WBStrain00029521 Copy
http://www.wormbase.org/db/get?name=WBStrain00029519
Source Database: WormBase (WB)
Affected Genes: WBGene00004732(sax-7)
Genomic Alteration: WBGene00004732(sax-7)
Availability: available
Source References: EMPTY
Synonyms: sax-7(ky146) IV; oyIs14 V; otEx3139.
Alternate IDs: WB-STRAIN:OH7219, CGC_OH7219
Notes: oyIs14 [sra-6::GFP + lin-15(+)]. otEx3139 [unc-14p::sax-7cDNA long + (pRF4) rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68.|"oyIs14 [sra-6::GFP + lin-15(+)]. otEx3139 [unc-14p::sax-7cDNA long + rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68."
Proper citation: RRID:WB-STRAIN:WBStrain00029519 Copy
http://www.wormbase.org/db/get?name=WBStrain00029515
Source Database: WormBase (WB)
Affected Genes: WBGene00004732(sax-7)
Genomic Alteration: WBGene00004732(sax-7)
Availability: unknown
Source References: EMPTY
Synonyms: sax-7(ky146) IV; oyIs14 V; otEx3129.
Alternate IDs: WB-STRAIN:OH7210
Notes: oyIs14 [sra-6::GFP + lin-15(+)]. otEx3129 [dpy-7p::sax-7cDNA short + (pRF4) rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68.
Proper citation: RRID:WB-STRAIN:WBStrain00029515 Copy
http://www.wormbase.org/db/get?name=WBStrain00029518
Source Database: WormBase (WB)
Affected Genes: WBGene00004732(sax-7)
Genomic Alteration: WBGene00004732(sax-7)
Availability: available
Source References: EMPTY
Synonyms: sax-7(ky146) IV; oyIs14 V; otEx3141.
Alternate IDs: WB-STRAIN:OH7217, CGC_OH7217
Notes: oyIs14 [sra-6::GFP + lin-15(+)]. otEx3141 [unc-14p::sax-7cDNA long-delta11 + (pRF4) rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68.|"oyIs14 [sra-6::GFP + lin-15(+)]. otEx3141 [unc-14p::sax-7cDNA long-delta11 + rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68."
Proper citation: RRID:WB-STRAIN:WBStrain00029518 Copy
http://www.wormbase.org/db/get?name=WBStrain00029514
Source Database: WormBase (WB)
Affected Genes: WBGene00004732(sax-7)
Genomic Alteration: WBGene00004732(sax-7)
Availability: available
Source References: EMPTY
Synonyms: sax-7(ky146) IV; oyIs14 V; otEx3135.
Alternate IDs: WB-STRAIN:OH7204, CGC_OH7204
Notes: oyIs14 [sra-6::GFP + lin-15(+)]. otEx3135 [myo-3p::sax-7cDNA short + (pRF4) rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68.|"oyIs14 [sra-6::GFP + lin-15(+)]. otEx3135 [myo-3p::sax-7cDNA short + rol-6(su1006)]. Pick Rollers to maintain. Reference: Pocock R, et al., Mol Cell Neurosci. 2008 Jan;37(1):56-68."
Proper citation: RRID:WB-STRAIN:WBStrain00029514 Copy
http://www.wormbase.org/db/get?name=WBStrain00029591
Source Database: WormBase (WB)
Affected Genes: WBGene00000463(ceh-43)|WBGene00001867(him-8)
Genomic Alteration: WBGene00000463(ceh-43), WBGene00001867(him-8)
Availability: available
Source References: EMPTY
Synonyms: ceh-43(tm480) otIs221 III; him-8(e1489) IV; norEx41.
Alternate IDs: WB-STRAIN:OH10194, CGC_OH10194
Notes: otIs221 [cat-1::GFP]. norEx41 [ceh-43(fosmid) + dat-1::mCherry]. Him. tm480 embryonic lethality is rescued by extrachromosomal array. Pick mCherry+ animals to maintain.
Proper citation: RRID:WB-STRAIN:WBStrain00029591 Copy
http://www.wormbase.org/db/get?name=WBStrain00029593
Source Database: WormBase (WB)
Affected Genes: WBGene00000463(ceh-43)|WBGene00001864(him-5)
Genomic Alteration: WBGene00000463(ceh-43), WBGene00001864(him-5)
Availability: available
Source References: EMPTY
Synonyms: ceh-43(tm480) III; him-5(e1490) V; nIs118; norEx41.
Alternate IDs: WB-STRAIN:OH10196, CGC_OH10196
Notes: nIs118 [cat-2::GFP]. norEx41 [ceh-43 fosmid + dat-1::mCherry]. Him. tm480 embryonic lethality is rescued by extrachromosomal array. Pick mCherry+ animals to maintain.
Proper citation: RRID:WB-STRAIN:WBStrain00029593 Copy
http://www.wormbase.org/db/get?name=WBStrain00029590
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx4503.
Alternate IDs: WB-STRAIN:OH10162, CGC_OH10162
Notes: otEx4503 [hlh-16::GFP + rol-6(su1006)]. Translation HLH-16::GFP reporter. Pick Rollers to maintain. Reference: Bertrand et al. (2011) Current Biology 21, 1225-1231.
Proper citation: RRID:WB-STRAIN:WBStrain00029590 Copy
http://www.wormbase.org/db/get?name=WBStrain00029508
Source Database: WormBase (WB)
Affected Genes: WBGene00016029(elf-1)
Genomic Alteration: WBGene00016029(elf-1)
Availability: available
Source References: EMPTY
Synonyms: C24A1.2(tm801) III; vtIs1 V.
Alternate IDs: WB-STRAIN:OH7159, CGC_OH7159
Notes: vtIs1 [dat-1p::GFP + rol-6(su1006)] V. Rollers. Reference: Flames N, Hobert O, 2009 Nature 458, 885-889.
Proper citation: RRID:WB-STRAIN:WBStrain00029508 Copy
http://www.wormbase.org/db/get?name=WBStrain00029504
Source Database: WormBase (WB)
Affected Genes: WBGene00003018(lin-32)
Genomic Alteration: WBGene00003018(lin-32)
Availability: available
Source References: EMPTY
Synonyms: vtIs1 vsIs33 V; lin-32(ot366) X.
Alternate IDs: WB-STRAIN:OH7118, CGC_OH7118
Notes: vtIs1 [dat-1p::GFP + rol-6(su1006)] V. vsIs33 [dop-3::RFP] V. Missing CEPVs and PDEs; ADEs variably affected.
Proper citation: RRID:WB-STRAIN:WBStrain00029504 Copy
http://www.wormbase.org/db/get?name=WBStrain00029588
Source Database: WormBase (WB)
Affected Genes: WBGene00004949(sox-2)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00004949(sox-2), WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: unc-119(ed3) III; sox-2(ot640[unc-119(+)]) X; otEx4454.
Alternate IDs: WB-STRAIN:OH10053, CGC_OH10053
Notes: otEx4454 [sox-2(fosmid)::mCherry + elt-2p::DsRed]. ot640 was generated by using MosDel removing the entire sox-2 locus and insert unc-119(+). ot640 homozygous arrest in L1 with a pharynx unattached (Pun) phenotype. Maintain by picking WT DsRed+ to maintain. Reference: Vidal B, et al. Development. 2015 Jul 15;142(14):2464-77.|"otEx4454 [sox-2(fosmid)::mCherry + elt-2p::DsRed]. ot640 was generated by using MosDel removing the entire sox-2 locus and insert unc-119(+). ot640 homozygous arrest in L1 with a pharynx unattached (Pun) phenotype. Maintain by picking WT to maintain (transgene should be required for viability). Reference: Vidal B, et al. Development. 2015 Jul 15;142(14):2464-77."
Proper citation: RRID:WB-STRAIN:WBStrain00029588 Copy
http://www.wormbase.org/db/get?name=WBStrain00029503
Source Database: WormBase (WB)
Affected Genes: WBGene00000254(bli-4)|WBGene00001534(gcy-7)|WBGene00001578(ges-1)|WBGene00003514(myo-2)|WBGene00003983(pes-10)|WBGene00006829(unc-101)|WBGene00009188(lsy-22)
Genomic Alteration: WBGene00000254(bli-4), WBGene00001534(gcy-7), WBGene00001578(ges-1), WBGene00003514(myo-2), WBGene00003983(pes-10), WBGene00006829(unc-101), WBGene00009188(lsy-22)
Availability: available
Source References: PMID:20439776
Synonyms: lsy-22(ot114) unc-101(m1) I/hT2 [bli-4(e937) let-?(q782) qIs48] (I;III); otIs3 V.
Alternate IDs: WB-STRAIN:OH7116, CGC_OH7116
Notes: Made_by: Eileen Flowers|"otIs3 [gcy-7::GFP + lin-15(+)]. qIs48 [myo-2::GFP + pes-10::GFP + ges-1::GFP]. Homozygous hT2 animals are inviable. Heterozygotes are WT and GFP+. Homozygous lsy-22(ot114) unc-101(m1) animals are Unc and have a maternal effect embryonic lethal phenotype. Whole genome sequenced strain."
Proper citation: RRID:WB-STRAIN:WBStrain00029503 Copy
http://www.wormbase.org/db/get?name=WBStrain00029540
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx3403.
Alternate IDs: WB-STRAIN:OH7689, CGC_OH7689
Notes: otEx3403 [unc-14p::hif-1(P621A)::YFP(cDNA) + rol-6(su1006)]. Line 3. Pick Rollers.
Proper citation: RRID:WB-STRAIN:WBStrain00029540 Copy
http://www.wormbase.org/db/get?name=WBStrain00029541
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx3398.
Alternate IDs: WB-STRAIN:OH7690, CGC_OH7690
Notes: otEx3398 [unc-14p::hif-1::YFP(cDNA) + rol-6(su1006)]. Line 1. Pick Rollers.
Proper citation: RRID:WB-STRAIN:WBStrain00029541 Copy
http://www.wormbase.org/db/get?name=WBStrain00029542
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx3399.
Alternate IDs: WB-STRAIN:OH7691, CGC_OH7691
Notes: otEx3399 [unc-14p::hif-1::YFP(cDNA) + pRF4]. Line 2. Pick Rollers.|"otEx3399 [unc-14p::hif-1::YFP(cDNA) + rol-6(su1006)]. Line 2. Pick Rollers."
Proper citation: RRID:WB-STRAIN:WBStrain00029542 Copy
http://www.wormbase.org/db/get?name=WBStrain00029539
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx3402.
Alternate IDs: WB-STRAIN:OH7688, CGC_OH7688
Notes: otEx3402 [unc-14p::hif-1(P621A)::YFP(cDNA) + rol-6(su1006)]. Line 2. Pick Rollers.|"otEx3402[unc-14p::hif-1(P621A)::YFP(cDNA) + pRF4]. Line 2. Pick Rollers."
Proper citation: RRID:WB-STRAIN:WBStrain00029539 Copy
http://www.wormbase.org/db/get?name=WBStrain00029536
Source Database: WormBase (WB)
Affected Genes: WBGene00003657(nhr-67)
Genomic Alteration: WBGene00003657(nhr-67)
Availability: available
Source References: EMPTY
Synonyms: nhr-67(ok631) IV; otEx3362.
Alternate IDs: WB-STRAIN:OH7631, CGC_OH7631
Notes: otEx3362 [nhr-67(fosmid)::mCherry + elt-2::GFP]. Pick GFP+ to maintain. otEx3362 rescues nhr-67(ok631).
Proper citation: RRID:WB-STRAIN:WBStrain00029536 Copy
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within NIF that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
