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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
| Organism Name | Proper Citation | Species | Synonyms |
Notes |
Phenotype | Affected Gene | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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nova-1(syb4373[nova-1::GFP]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051859 | Caenorhabditis elegans | nova-1(syb4373[nova-1::GFP]) V. | GFP tag inserted at the C-terminus of the endogenous nova-1 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341|"GFP tag inserted at the C-terminus of the endogenous nova-1 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Made_by: SUNY Biotech" | WBGene00013347(nova-1) | WBGene00013347(nova-1) | WB-STRAIN:WBStrain00051859 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||
|
flp-26(syb3588[flp-26::T2A::3xNLS::GFP]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051858 | Caenorhabditis elegans | flp-26(syb3588[flp-26::T2A::3xNLS::GFP]) X. | Endogenous flp-26 locus tagged with 3xNLS::GFP reporter. Reference: Sun H & Hobert O. Nature. 2021 Dec;600(7887):93-99. doi: 10.1038/s41586-021-04071-4. PMID: 34759317.|"Supplementary_genotype flp-26(syb3588[flp-26::T2A::3xNLS::GFP]) X" | WBGene00020126(flp-26) | WBGene00020126(flp-26) | WB-STRAIN:WBStrain00051858 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-09-05 04:57:15 | 0 | |||
|
eif-2D(syb3432[(delta)SUI1 domain +3xFLAG]) II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051857 | Caenorhabditis elegans | eif-2D(syb3432[(delta)SUI1 domain +3xFLAG]) II. | Endogenous eif-2D locus tagged with 3xFLAG. The SUI1 domain of the endogenous EIF-2D locus has been deleted and replaced with 3xFLAG via CRISPR/Cas9 gene editing. Reference: Sonobe Y, et al. Nat Commun. 2021 Oct 15;12(1):6025. doi: 10.1038/s41467-021-26303-x. PMID: 34654821|"Made_by: Yoshifumi Sonobe" | WB-STRAIN:WBStrain00051857 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||||
|
pha-1(e2123) III; otEx7567. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051841 | Caenorhabditis elegans | pha-1(e2123) III; otEx7567. | Made_by: Tessa Tekieli|"otEx7567[nlp-56p::GFP + pha-1(+)]. RMG neurons are labeled with GFP. Can be used to isolate RMG by FACS. Used by CeNGEN project for RNA-Seq (https:" | WBGene00004010(pha-1) | WBGene00004010(pha-1) | WB-STRAIN:WBStrain00051841 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||
|
otIs837. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051840 | Caenorhabditis elegans | otIs837. | Made_by: Marie Gendrel, Rebecca Stephen|"otIs837 [unc-25(prom3)(del1)::GFP]. RME neurons are labeled with GFP. Can be used to isolate RME by FACS. Used by CeNGEN project for RNA-Seq (https:" | WB-STRAIN:WBStrain00051840 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||||
|
ric-4(syb2878[ric-4::T2A::3xNLS::GFP]) V; ceh-14(ot1185) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051843 | Caenorhabditis elegans | ric-4(syb2878[ric-4::T2A::3xNLS::GFP]) V; ceh-14(ot1185) X. | Made_by: Eduardo Leyva-Diaz|"Null allele of ceh-14 generated by gRNAs targeted to the first and last exons, resulting in a 4056 bp deletion from +40 to +4096 relative to the start of the ORF. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Null allele of ceh-14 generated by gRNAs targeted to the first and last exons, resulting in a 4056 bp deletion from +40 to +4096 relative to the start of the ORF. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341" | WBGene00000438(ceh-14)|WBGene00004364(ric-4) | WBGene00000438(ceh-14), WBGene00004364(ric-4) | WB-STRAIN:WBStrain00051843 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||
|
ins-9(syb2616[ins-9::T2A::3xNLS::GFP]) X. Resource Report Resource Website 1+ mentions |
RRID:WB-STRAIN:WBStrain00051847 | Caenorhabditis elegans | ins-9(syb2616[ins-9::T2A::3xNLS::GFP]) X. | Endogenous ins-9 locus tagged with 3xNLS::GFP reporter. Reference: Sun H & Hobert O. Nature. 2021 Dec;600(7887):93-99. doi: 10.1038/s41586-021-04071-4. PMID: 34759317.|"Supplementary_genotype ins-9(syb2616[ins-9::T2A::3xNLS::GFP]) X" | WBGene00002092(ins-9) | WBGene00002092(ins-9) | WB-STRAIN:WBStrain00051847 | WormBase (WB) | WB | unknown | PMID:37935195 | 2026-09-05 04:57:15 | 1 | |||
|
otIs736; evIs111. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051838 | Caenorhabditis elegans | otIs736; evIs111. | Made_by: Maryam Majeed (Hobert Lab)|"otIs736 [cat-4p::mCherry + rol-6(su1006)]. evIs111 [F25B3.3::GFP + dpy-20(+)]. Rollers. Pan-neural GFP expression. The two HSN neurons are marked with both GFP and mCherry. Can be used to isolate HSN by FACS. Used by CeNGEN project for RNA-Seq (https:" | WB-STRAIN:WBStrain00051838 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||||
|
ceh-48(ot1125[ceh-48::GFP]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051839 | Caenorhabditis elegans | ceh-48(ot1125[ceh-48::GFP]) IV. | GFP tag inserted at the C-terminus of the endogenous ceh-48 locus by CRISPR. Allele obtained using Cas9-sgRNA ribonucleoprotein complex, following Dokshin et al, 2018 method. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341|"GFP tag inserted at the C-terminus of the endogenous ceh-48 locus by CRISPR. Allele obtained using Cas9-sgRNA ribonucleoprotein complex, following Dokshin et al, 2018 method. Reference: Leyva-Diaz E & Hobert O. Current Biol. 2022 Mar 3;S0960-9822(22)00262-7. PMID: 35259341"|"Made_by: Eduardo Leyva-Diaz" | WBGene00015934(ceh-48) | WBGene00015934(ceh-48) | WB-STRAIN:WBStrain00051839 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:15 | 0 | ||||
|
ztf-6(st12301[ztf-6::TY1::EGFP::3xFLAG]) I. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051938 | Caenorhabditis elegans | ztf-6(st12301[ztf-6::TY1::EGFP::3xFLAG]) I. | eGFP and 3xFLAG tags inserted into endogenous locus by CRISPR/Cas9.|"Made_by: DKV/LS/CK" | WBGene00012317(ztf-6) | WBGene00012317(ztf-6) | WB-STRAIN:WBStrain00051938 | WormBase (WB) | WB | unknown | 2026-09-05 04:57:17 | 0 | ||||
|
ujIs113 II; nhr-35(dev156([nhr-35::mNeonGreen]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051990 | Caenorhabditis elegans | ujIs113 II; nhr-35(dev156([nhr-35::mNeonGreen]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of nhr-35 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00003628(nhr-35) | WBGene00003628(nhr-35) | WB-STRAIN:WBStrain00051990 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
|
ujIs113 II; end-1(dev162([end-1::mNeonGreen]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051994 | Caenorhabditis elegans | ujIs113 II; end-1(dev162([end-1::mNeonGreen]) V. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of end-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00001310(end-1) | WBGene00001310(end-1) | WB-STRAIN:WBStrain00051994 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
|
ujIs113 II; elt-7(dev159([mNeonGreen::elt-7]) V. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051993 | Caenorhabditis elegans | ujIs113 II; elt-7(dev159([mNeonGreen::elt-7]) V. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of elt-7 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00015981(elt-7) | WBGene00015981(elt-7) | WB-STRAIN:WBStrain00051993 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
|
ujIs113 II; daf-3(dev163([daf-3::mNeonGreen]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051992 | Caenorhabditis elegans | ujIs113 II; daf-3(dev163([daf-3::mNeonGreen]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of daf-3 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00000899(daf-3) | WBGene00000899(daf-3) | WB-STRAIN:WBStrain00051992 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
|
ujIs113 II; sel-8(dev176([sel-8::mNeonGreen]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051998 | Caenorhabditis elegans | ujIs113 II; sel-8(dev176([sel-8::mNeonGreen]) III. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of sel-8 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00004765(sel-8) | WBGene00004765(sel-8) | WB-STRAIN:WBStrain00051998 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
|
ujIs113 II; ceh-30(dev253([mNeonGreen::ceh-30]) X. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052032 | Caenorhabditis elegans | ujIs113 II; ceh-30(dev253([mNeonGreen::ceh-30]) X. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ceh-30 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00000451(ceh-30) | WBGene00000451(ceh-30) | WB-STRAIN:WBStrain00052032 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:18 | 0 | |||
|
Y73E7A.1(dev233([Y73E7A.1::mNeonGreen]) I; ujIs113 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052030 | Caenorhabditis elegans | Y73E7A.1(dev233([Y73E7A.1::mNeonGreen]) I; ujIs113 II. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of Y73E7A.1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WB-STRAIN:WBStrain00052030 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:18 | 0 | |||||
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ujIs113 II; nob-1(dev231([mNeonGreen::nob-1]) III. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00052031 | Caenorhabditis elegans | ujIs113 II; nob-1(dev231([mNeonGreen::nob-1]) III. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of nob-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00003779(nob-1) | WBGene00003779(nob-1) | WB-STRAIN:WBStrain00052031 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:18 | 0 | |||
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ref-1(dev138([mNeonGreen::ref-1]) ujIs113 II. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051984 | Caenorhabditis elegans | ref-1(dev138([mNeonGreen::ref-1]) ujIs113 II. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ref-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00004334(ref-1) | WBGene00004334(ref-1) | WB-STRAIN:WBStrain00051984 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 | |||
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ujIs113 II; ngn-1(dev137([mNeonGreen::ngn-1]) IV. Resource Report Resource Website |
RRID:WB-STRAIN:WBStrain00051983 | Caenorhabditis elegans | ujIs113 II; ngn-1(dev137([mNeonGreen::ngn-1]) IV. | Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ngn-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1." | WBGene00003595(ngn-1) | WBGene00003595(ngn-1) | WB-STRAIN:WBStrain00051983 | WormBase (WB) | WB | unknown | PMID:34312566 | 2026-09-05 04:57:17 | 0 |
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