Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00055140
Source Database: WormBase (WB)
Affected Genes: WBGene00019616(nmur-2)
Genomic Alteration: WBGene00019616(nmur-2)
Availability: unknown
Source References: PMID:37935195
Synonyms: nmur-2(syb4517 [nmur-2::SL2::GFP::H2B)] II.
Notes: GFP tag inserted at the C-terminus of the endogenous nmur-2 locus by CRISPR. Allele generated by SUNY Biotech. Please contact Oliver Hobert prior to publishing work using this strain.|"GFP tag inserted at the C-terminus of the endogenous nmur-2 locus by CRISPR. Allele generated by SUNY Biotech. Reference: Ripoll-Sanchez L, et al. Neuron. 2023 Nov 15;111(22):3570-3589.e5. doi: 10.1016/j.neuron.2023.09.043. PMID: 37935195."|"Made_by: Suny Biotech"|"Supplementary_genotype nmur-2(syb4517 [nmur-2::SL2::GFP::H2B)] II"
Proper citation: RRID:WB-STRAIN:WBStrain00055140 Copy
http://www.wormbase.org/db/get?name=WBStrain00055234
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs572.
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs572 [15xUAS::TeTx::SL2::mKate::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] Neurotoxin cGAL effector."
Proper citation: RRID:WB-STRAIN:WBStrain00055234 Copy
http://www.wormbase.org/db/get?name=WBStrain00055230
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407, PMID:39024405
Synonyms: syIs595.
Notes: syIs595 [mec-17p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. cGAL driver for ALM, AVM, PLM, and PVM neurons.
Proper citation: RRID:WB-STRAIN:WBStrain00055230 Copy
http://www.wormbase.org/db/get?name=WBStrain00055196
Source Database: WormBase (WB)
Affected Genes: WBGene00017954(F31E8.4)
Genomic Alteration: WBGene00017954(F31E8.4)
Availability: unknown
Source References: EMPTY
Synonyms: F31E8.4(sy2030) II.
Notes: Made_by: Heenam Park|"Superficially wild type. CRISPR/Cas9 engineered STOP-IN null mutant of F31E8.4. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). Left flanking sequence: GATTCTCTTCAGCTGGTGGAAAACTGGATCTCT. Right flanking sequence: GTCTGgtaagtctatatacttcggacacattcaaatttg. Inserted sequence between the two-flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: TGGAAAACTGGATCTCTGTC. Method Reference: Wang H, et al. G3 (Bethesda). 2018 Nov 6;8(11):3607-3616."
Proper citation: RRID:WB-STRAIN:WBStrain00055196 Copy
http://www.wormbase.org/db/get?name=WBStrain00055232
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs568.
Notes: Made_by: Chun-Hao Chen/Jun Young Oh|"syIs568 [15xUAS::tra-2(ic)::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] cGAL effector to induce feminization"
Proper citation: RRID:WB-STRAIN:WBStrain00055232 Copy
http://www.wormbase.org/db/get?name=WBStrain00055223
Source Database: WormBase (WB)
Availability: unknown
Source References: PMID:38096407
Synonyms: syIs536.
Notes: syIs536 [15xUAS::lin-3c::SL2::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder (NEB)] cGAL effector for epidermal growth factor
Proper citation: RRID:WB-STRAIN:WBStrain00055223 Copy
http://www.wormbase.org/db/get?name=WBStrain00055189
Source Database: WormBase (WB)
Affected Genes: WBGene00008626(nlp-79)
Genomic Alteration: WBGene00008626(nlp-79)
Availability: unknown
Source References: EMPTY
Synonyms: nlp-79(syb7564[nlp-79::SL2::GFP::H2B]) IV.
Notes: Endogenous locus tagged with SL2::GFP::H2B using CRISPR/Cas9. Please contact Oliver Hobert prior to publishing work using this strain.|"Made_by: Suny Biotech"
Proper citation: RRID:WB-STRAIN:WBStrain00055189 Copy
http://www.wormbase.org/db/get?name=WBStrain00055225
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs554; syIs300
Notes: Made_by: JUN Young Oh/Shahla Gharib|"syIs554 [nmr-1p::NLS::cGAL(DBD)::gp41-1-N-intein::let-858 3'UTR + flp-20p::NLS::gp41-1-C-intein::cGAL(AD)::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. Split cGAL driver for PVC neuron. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055225 Copy
http://www.wormbase.org/db/get?name=WBStrain00055224
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs537; syIs300
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs537 [glr-3p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] cGAL driver for RIA neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055224 Copy
http://www.wormbase.org/db/get?name=WBStrain00055221
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs532; syIs300
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs532 [hlh-34p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] cGAL driver for AVH neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with the transgenic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00055221 Copy
http://www.wormbase.org/db/get?name=WBStrain00055228
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs561.
Notes: Made_by: Jun Young Oh/Shahla Gharib|"syIs561 [ttx-3p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] cGAL driver for AIY neurons."
Proper citation: RRID:WB-STRAIN:WBStrain00055228 Copy
http://www.wormbase.org/db/get?name=WBStrain00055193
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: utsIs3.
Notes: utsIs3 [rab-11.2p::YFP::unc-54 3'UTR]. Transcriptional reporter for rab-11.2 activation. YFP expression is low at baseline and activated in the intestine by lipid depletion. Reference: Watterson A, et al. Nature. 2022 May;605(7911):736-740. doi: 10.1038/s41586-022-04729-7. PMID: 35585236.
Proper citation: RRID:WB-STRAIN:WBStrain00055193 Copy
http://www.wormbase.org/db/get?name=WBStrain00055194
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: utsIs4.
Notes: utsIs4 [nhr-49p::nhr-49::GFP + myo-2p::mCherry]. Strain was back-crossed to N2 following transgene integration (parental strain described in Ratnappan R, et al. PLoS Genet. 2014 Dec 4;10(12):e1004829. doi: 10.1371/journal.pgen.1004829. ). Reference: Watterson A, et al. Nature. 2022 May;605(7911):736-740. doi: 10.1038/s41586-022-04729-7. PMID: 35585236.
Proper citation: RRID:WB-STRAIN:WBStrain00055194 Copy
http://www.wormbase.org/db/get?name=WBStrain00055333
Source Database: WormBase (WB)
Affected Genes: WBGene00006508(tns-1)
Genomic Alteration: WBGene00006508(tns-1)
Availability: unknown
Source References: PMID:39999212
Synonyms: tns-1(sy1813) I.
Notes: Made_by: Heenam Park|"Superficially wild type. CRISPR/Cas9 engineered STOP-IN null mutant of tns-1. Universal 43bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). Left flanking sequence: CAATTCTCTAGAGTTATACAAAGACAAATTAGTGGTGC. Right flanking sequence: AGGAGGTGGAATTCTAAAGAAGAGTAATGGAAAG. Inserted sequence between the two-flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: AGACAAATTAGTGGTGCAGG Method Reference: Wang H, et al. G3 (Bethesda). 2018 Nov 6;8(11):3607-3616."
Proper citation: RRID:WB-STRAIN:WBStrain00055333 Copy
http://www.wormbase.org/db/get?name=WBStrain00055299
Source Database: WormBase (WB)
Affected Genes: WBGene00011656(oac-45)
Genomic Alteration: WBGene00011656(oac-45)
Availability: unknown
Source References: EMPTY
Synonyms: oac-45(sy1742) I.
Notes: Made_by: Heenam Park|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of oac-45. Universal 43 bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). left flanking sequence: GTTCTTGGATTTCATTTCTACCCTAATCAGTTTCCC right flanking sequence: AATGGGTACCTTGGAGTTGATCAgtaaggtttttag inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: ACCCTAATCAGTTTCCCAAT Method Reference: G3 (Bethesda).2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00055299 Copy
http://www.wormbase.org/db/get?name=WBStrain00055335
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs799; syIs300.
Notes: Made_by: Stephanie Nava/Shahla Gharib|"syIs799 [F58F6.6p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. cGAL driver for PHC neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFP marker, but will consistently produce worms with the transgenic marker in next generation."
Proper citation: RRID:WB-STRAIN:WBStrain00055335 Copy
http://www.wormbase.org/db/get?name=WBStrain00055296
Source Database: WormBase (WB)
Affected Genes: WBGene00000676(col-102)
Genomic Alteration: WBGene00000676(col-102)
Availability: unknown
Source References: EMPTY
Synonyms: col-102(sy1735) IV.
Notes: Made_by: Heenam Park|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of col-102. Universal 43 bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). left flanking sequence: GATGAGGTCTCTCAAGATCTTACACAATTCCGTGG right flanking sequence: ATACTATGATGATGCGTGGAGAACCATGATGGTC inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: ACGCATCATCATAGTATCCA Method Reference: G3 (Bethesda).2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00055296 Copy
http://www.wormbase.org/db/get?name=WBStrain00055295
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: syIs768; syIs300.
Notes: Made_by: Stephanie Nava/Shahla Gharib|"syIs768 [aqp-6p::NLS::GAL4(sk)::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder (NEB)]. cGAL driver for IL1 neurons. syIs300 [15xUAS::(delta)pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] is a GFP cGAL effector. Some worms do not express ttx-3p::RFP marker, but will consistently produce worms with the transgenic marker in next generation."
Proper citation: RRID:WB-STRAIN:WBStrain00055295 Copy
http://www.wormbase.org/db/get?name=WBStrain00055322
Source Database: WormBase (WB)
Affected Genes: WBGene00005110(srd-32)
Genomic Alteration: WBGene00005110(srd-32)
Availability: unknown
Source References: EMPTY
Synonyms: srd-32(sy1785) V.
Notes: Made_by: Heenam Park|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of srd-32. Universal 43 bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). left flanking sequence: CACCATATACTGTATTCTTGGCGAACACCTCTA right flanking sequence: TAACGCAGCTAGGGTATTGCATATGTTTCCTCTTAAC inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: ATACCCTAGCTGCGTTATAG Method Reference: G3 (Bethesda).2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00055322 Copy
http://www.wormbase.org/db/get?name=WBStrain00055288
Source Database: WormBase (WB)
Affected Genes: WBGene00003232(mgl-1)
Genomic Alteration: WBGene00003232(mgl-1)
Availability: unknown
Source References: EMPTY
Synonyms: mgl-1(sy1623) X.
Notes: Made_by: Heenam Park|"Superficially wild-type. CRISPR/Cas9 engineered STOP-IN null mutant of mgl-1. Universal 43 bp-long knock-in insertion with 3-frame stop codon (STOP-IN cassette). left flanking sequence: GTGCACTTATTCTTGATTCATGCTCAAATCCAGCA right flanking sequence: TATGCGCTAAACCAGAGTTTAGATTTTGTGAGAG inserted sequence between the two flanking sequence (STOP-IN cassette): GGGAAGTTTGTCCAGAGCAGAGGTGACTAAGTGATAAgctagc. sgRNA: CTCTGGTTTAGCGCATATGC Method Reference: G3 (Bethesda).2018 Nov 6;8(11):3607-3616"
Proper citation: RRID:WB-STRAIN:WBStrain00055288 Copy
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within NIF that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
