Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00030970
Source Database: WormBase (WB)
Availability: available
Source References: PMID:33440164, PMID:37258276, PMID:37769660, PMID:38446031, PMID:38548742
Synonyms: qrIs2.
Alternate IDs: WB-STRAIN:PS6025, CGC_PS6025
Notes: qrIs2 [sra-9::mCasp1]. Caspase expression in ASK neuron.|"Supplementary_genotype -ASK: qrIs2[sra-9::mCasp1]"|"Supplementary_genotype qrIs2[sra-9::mCasp1]"|"WBStrain mapped, WBPaper00060871 added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00030970 Copy
http://www.wormbase.org/db/get?name=WBStrain00030978
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; him-5(e1490) V; syEx1343.
Alternate IDs: WB-STRAIN:PS6743, CGC_PS6743
Notes: syEx1343 [myo-3p::fars-1(T412G)::fib-1::rps-16::GFP(S65C, SynIVS)::unc-54 3' UTR + myo-2p::dsRed::unc-54 3' UTR + pha-1(+) + pBluescript]. GFP expression in body wall muscle. Maintain at 25C and pick animals with red fluorescence in pharynx. Expresses a phenylalanyl-tRNA capable of tagging proteins with the non-canonical amino acid p-azido-L-phenylalanine in body wall muscle. Reference: Yuet KP, et al. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2705-10.|"syEx1343 [myo-3p::fars-1(T412G)::fib-1::rps-16::GFP(S65C, SynIVS)::unc-54 3' UTR + myo-2p::DsRed::unc-54 3' UTR + pha-1(+) + pBluescript]. GFP expression in body wall muscle. Maintain at 25C and pick animals with red fluorescence in pharynx. Expresses a phenylalanyl-tRNA capable of tagging proteins with the non-canonical amino acid p-azido-L-phenylalanine in body wall muscle. Reference: Yuet KP, et al. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2705-10."
Proper citation: RRID:WB-STRAIN:WBStrain00030978 Copy
http://www.wormbase.org/db/get?name=WBStrain00030977
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; him-5(e1490) V; syEx1342.
Alternate IDs: WB-STRAIN:PS6742, CGC_PS6742
Notes: syEx1342 [myo-2p::fars-1(T412G)::fib-1::rps-16::GFP(S65C, SynIVS)::unc-54 3' UTR + unc-122p::mCherry::unc-54 3' UTR + pha-1(+) + pBluescript]. GFP expression in the pharynx. Maintain at 25C and pick animals with red fluorescence in coelomocytes. Expresses a phenylalanyl-tRNA capable of tagging proteins with the non-canonical amino acid p-azido-L-phenylalanine in pharyngeal muscle. Reference: Yuet KP, et al. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2705-10.
Proper citation: RRID:WB-STRAIN:WBStrain00030977 Copy
http://www.wormbase.org/db/get?name=WBStrain00030976
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; him-5(e1490) V; syEx1341.
Alternate IDs: WB-STRAIN:PS6741, CGC_PS6741
Notes: syEx1341 [ges-1p::fars-1(T412G)::fib-1::rps-16::GFP(S65C, SynIVS)::unc-54 3' UTR + myo-2p::dsRed::unc-54 3' UTR + pha-1(+) + pBluescript]. GFP expression in the intestine. Maintain at 25C and pick animals with red fluorescence in pharynx. Expresses a phenylalanyl-tRNA capable of tagging proteins with the non-canonical amino acid p-azido-L-phenylalanine in the intestine. Reference: Yuet KP, et al. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2705-10.|"syEx1341 [ges-1p::fars-1(T412G)::fib-1::rps-16::GFP(S65C, SynIVS)::unc-54 3' UTR + myo-2p::DsRed::unc-54 3' UTR + pha-1(+) + pBluescript]. GFP expression in the intestine. Maintain at 25C and pick animals with red fluorescence in pharynx. Expresses a phenylalanyl-tRNA capable of tagging proteins with the non-canonical amino acid p-azido-L-phenylalanine in the intestine. Reference: Yuet KP, et al. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2705-10."
Proper citation: RRID:WB-STRAIN:WBStrain00030976 Copy
http://www.wormbase.org/db/get?name=WBStrain00030975
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1)
Availability: unknown
Source References: PMID:34429473
Synonyms: pha-1(e2123) III; him-5(e1490) V; syEx1240.
Alternate IDs: WB-STRAIN:PS6374
Notes: syEx1240 [str-2p::GCaMP3 + pha-1(+)]. Expression of GCaMP3 calcium indicator in the AWCon neuron. Reference: Zaslaver et al. Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):E1688-9.|"WBStrain provided so WBPaper00061836 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00030975 Copy
http://www.wormbase.org/db/get?name=WBStrain00030974
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: syIs243.
Alternate IDs: WB-STRAIN:PS6192, CGC_PS6192
Notes: syIs243 [myo-3p::TOM20::mRFP + unc-119(+) + pBS Sk+]. Integrated from PS6053. Strain has been outcrossed, but not known if unc-119 mutation is still present in the background.
Proper citation: RRID:WB-STRAIN:WBStrain00030974 Copy
http://www.wormbase.org/db/get?name=WBStrain00030973
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)|WBGene00006843(unc-119)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1), WBGene00006843(unc-119)
Availability: available
Source References: PMID:37427543
Synonyms: pha-1(e2123) unc-119(ed4) III; syEx1155.
Alternate IDs: WB-STRAIN:PS6187, CGC_PS6187
Notes: syEx1155 [myo-3p::tomm-20::mRFP::3xMyc + Cbr-unc-119(+)]. Maintain at 15C. Pick non-Unc to maintain array.|"syEx1155 [myo-3p::tomm-20::mRFP::3xMyc]. Maintain at 15C. Pick non-Unc to maintain array."
Proper citation: RRID:WB-STRAIN:WBStrain00030973 Copy
http://www.wormbase.org/db/get?name=WBStrain00030972
Source Database: WormBase (WB)
Affected Genes: WBGene00001864(him-5)|WBGene00004010(pha-1)
Genomic Alteration: WBGene00001864(him-5), WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; him-5(e1490) V; syEx1147.
Alternate IDs: WB-STRAIN:PS6058, CGC_PS6058
Notes: syEx1147 [des-2::DES-2::GFP + pha-1(+) + pBluescript KS(+)]. Maintain at 25C to select for presence of transgene. GFP reporter is driven by the promoter of the des-2/des-3 operon and is expressed in ALA, RID, PVD, FLP, IL2, PLM, PVC, and M1 muscles of the pharynx. This construct contains 3.4 kb of sequence upstream of the des-2 start ATG (Treinin et al., 1998) (Van Buskirk and Sternberg, 2010).
Proper citation: RRID:WB-STRAIN:WBStrain00030972 Copy
http://www.wormbase.org/db/get?name=WBStrain00030981
Source Database: WormBase (WB)
Availability: available
Source References: PMID:38096407
Synonyms: syIs300 V.
Alternate IDs: WB-STRAIN:PS6843, CGC_PS6843
Notes: Made_by: Han Wang and Jonathan Liu|"syIs300 [15xUAS::(delta)pes-10::GFP::unc-54 3'UTR + ttx-3p::RFP + pBlueScript]. GFP cGAL effector. Some worms do not express ttx-3p::RFPmarker, but will consistently produce worms with transgenetic marker in next generation. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00030981 Copy
http://www.wormbase.org/db/get?name=WBStrain00030988
Source Database: WormBase (WB)
Availability: available
Source References: PMID:39738055
Synonyms: syIs334 X.
Alternate IDs: WB-STRAIN:PS6961, CGC_PS6961
Notes: Made_by: Han Wang and Jonathan Liu|"syIs334 [rab-3p::NLS::GAL4SK::VP64::let-858"|"syIs334 [rab-3p::NLS::GAL4SK::VP64::let-8583'UTR + unc-122p::RFP + pBlueScript]. rab-3 cGAL driver for the whole nervous system. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00030988 Copy
http://www.wormbase.org/db/get?name=WBStrain00030987
Source Database: WormBase (WB)
Availability: available
Source References: PMID:38869949, PMID:39738055
Synonyms: syIs321 I.
Alternate IDs: WB-STRAIN:PS6936, CGC_PS6936
Notes: Made_by: Han Wang and Jonathan Liu|"syIs321 [myo-3p::NLS::GAL4SK::VP64::unc-54"|"syIs321 [myo-3p::NLS::GAL4SK::VP64::unc-543'UTR + myo-2p::NLS::mCherry + pBlueScript]. myo-3 cGAL driver for body wall muscle. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00030987 Copy
http://www.wormbase.org/db/get?name=WBStrain00030986
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: syIs320 V.
Alternate IDs: WB-STRAIN:PS6935, CGC_PS6935
Notes: Made_by: Han Wang and Jonathan Liu|"syIs320"|"syIs320[nlp-40p::NLS::GAL4SK::VP64::unc-54 3'UTR + myo-2p::NLS::mCherry + pBlueScript] V. nlp-40 cGAL driver for intestine. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00030986 Copy
http://www.wormbase.org/db/get?name=WBStrain00030984
Source Database: WormBase (WB)
Availability: available
Source References: PMID:39738055
Synonyms: syIs317 II.
Alternate IDs: WB-STRAIN:PS6916, CGC_PS6916
Notes: Made_by: Han Wang and Jonathan Liu|"syIs317"|"syIs317 [nlp-40p::NLS::GAL4SK::VP64::unc-54 3'UTR + myo-2p::NLS::mCherry + pBlueScript]. nlp-40 cGAL driver for intestine. NOTE: Incorrectly annotated as being on LG III in paper; actually should be on LG II.Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00030984 Copy
http://www.wormbase.org/db/get?name=WBStrain00030907
Source Database: WormBase (WB)
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: available
Source References: EMPTY
Synonyms: syIs66 II; unc-119(ed4) III.
Alternate IDs: WB-STRAIN:PS3665, CGC_PS3665
Notes: syIs66 [B0034.1::pes-10::GFP + unc-119(+)] II. Expressed in vulE and vulF. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects.
Proper citation: RRID:WB-STRAIN:WBStrain00030907 Copy
http://www.wormbase.org/db/get?name=WBStrain00030905
Source Database: WormBase (WB)
Affected Genes: WBGene00000584(cog-1)
Genomic Alteration: WBGene00000584(cog-1)
Availability: unknown
Source References: EMPTY
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PS3663
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00030905 Copy
http://www.wormbase.org/db/get?name=WBStrain00030904
Source Database: WormBase (WB)
Affected Genes: WBGene00000584(cog-1)
Genomic Alteration: WBGene00000584(cog-1)
Availability: available
Source References: PMID:26024448
Synonyms: syIs63.
Alternate IDs: WB-STRAIN:PS3662, CGC_PS3662
Notes: syIs63 [cog-1::GFP + unc-119(+)]. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects.|"syIs63[cog-1::GFP + unc-119(+)]. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects."
Proper citation: RRID:WB-STRAIN:WBStrain00030904 Copy
http://www.wormbase.org/db/get?name=WBStrain00030903
Source Database: WormBase (WB)
Affected Genes: WBGene00002146(ipp-5)
Genomic Alteration: WBGene00002146(ipp-5)
Availability: available
Source References: EMPTY
Synonyms: ipp-5(sy605) X.
Alternate IDs: WB-STRAIN:PS3653, CGC_PS3653
Notes: Subtle ovulation defect which is viewable by Nomarski - 2 oocytes ovulate (pass into uterus) at the same time. Double mutants with lfe-2(sy326) and lfe-1(sy290) show sterility. Double mutant with lin-3(n1058) is fertile. Do not distribute this strain; other labs should request it from the CGC. This strain cannot be distributed to commercial organizations. This strain cannot be used for any commercial purpose or for work on human subjects.
Proper citation: RRID:WB-STRAIN:WBStrain00030903 Copy
http://www.wormbase.org/db/get?name=WBStrain00031002
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: syIs337 syIs398 III.
Alternate IDs: WB-STRAIN:PS7169, CGC_PS7169
Notes: Made_by: Han Wang and Jonathan Liu|"syIs337 [15xUAS::pes-10::GFP::let-858 3'UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)]. syIs398 [hsp16.41p::NLS::GAL4SK::VP64::let-858 3'UTR + unc-122p::RFP + 1kb DNA ladder(NEB)]. syIs337 is a GFP cGAL effector. syIs398 is hsp-16.41 cGAL driver for heat shock promoter. Bright GFP fluorescence in a few head neurons without heat shock. Reference: Wang H, et al. Nat Methods. 2017 Feb;14(2):145-148."
Proper citation: RRID:WB-STRAIN:WBStrain00031002 Copy
http://www.wormbase.org/db/get?name=WBStrain00031089
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: nurf-1(kah91)II/ oxTi924 II
Alternate IDs: WB-STRAIN:PTM317
Notes: N2 Background
Proper citation: RRID:WB-STRAIN:WBStrain00031089 Copy
http://www.wormbase.org/db/get?name=WBStrain00031086
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: dpy-10 (kah83)II kyIR1(V, CB4856>N2) qgIR1(X, CB4856>N2).
Alternate IDs: WB-STRAIN:PTM288
Notes: Information on this strain can be found in the following publication : https://www.biorxiv.org/content/early/2018/04/30/309997
Proper citation: RRID:WB-STRAIN:WBStrain00031086 Copy
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within NIF that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
