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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
UCSC Xena
 
Resource Report
Resource Website
1000+ mentions
UCSC Xena (RRID:SCR_018938) web service, software resource, production service resource, data access protocol, data or information resource, portal, service resource, analysis service resource Web tool where one component is front end Xena Browser and another component is back end Xena Hubs. Web based Xena Browser empowers biologists to explore data across multiple Xena Hubs with variety of visualizations and analyses. Xena Hubs host genomics data from laptops, public servers, behind firewall, or in cloud, and can be public or private. Xena Browser receives data simultaneously from multiple Xena Hubs and integrates them into single coherent visualization within browser. Allows users to explore functional genomic data sets for correlations between genomic and/or phenotypic variables. Data visualization, data analysis, genomics data, explore functional genomic data, functional genomic, data sets, genomic variable correlation, phenotypic variables correlation has parent organization: University of California at Santa Cruz; California; USA Free, Freely available https://xenabrowser.net/ SCR_018938 UCSC Xena Browser, Xena Browser 2026-08-02 09:07:54 2828
University of California at Santa Cruz; California; USA
 
Resource Report
Resource Website
10+ mentions
University of California at Santa Cruz; California; USA (RRID:SCR_011624) UCSC university Public research university in Santa Cruz, California. It is one of 10 campuses in the University of California system. is related to: Structure Harvester
has parent organization: University of California; California; USA
is parent organization of: BISC
is parent organization of: Spliceosome Database
is parent organization of: Cancer Genomics Hub
is parent organization of: In-Silico PCR
is parent organization of: VisiGene Image Browser
is parent organization of: NanoStriDE
is parent organization of: UCSC Genome Browser
is parent organization of: ENCODE
is parent organization of: GtRNAdb - Genomic tRNA Database
is parent organization of: Yeast Intron Database
is parent organization of: BigWig and BigBed
is parent organization of: The Intronerator
is parent organization of: EyeBrowse
is parent organization of: tRNAscan-SE
is parent organization of: tRNAscan-SE
is parent organization of: UCSC Cancer Genomics Browser
is parent organization of: BLAT
is parent organization of: University of California Santa Cruz Labs and Facilities
is parent organization of: Pecan
is parent organization of: Consensus CDS
is parent organization of: GenomeSpace
is parent organization of: Encode
is parent organization of: liftOver
is parent organization of: XRNA
is parent organization of: UCSC Xena
is parent organization of: University of California, Santa Cruz Chemical Screening Center Core Facility
is parent organization of: University of California at Santa Cruz Life Sciences Microscopy Center Core Facility
is parent organization of: University of California, Santa Cruz IBSC Flow Cytometry Core Facility
is parent organization of: University of California Santa Cruz Macromolecular Structure Function Core Facility
is parent organization of: University of California at Santa Cruz Institute for Biology of Stem Cells Cell Culture Core Facility
is parent organization of: University of California Santa Cruz Banana Slug Genomics Center Core Facility
is parent organization of: University of California at Santa Cruz Biomolecular Cryo Electron Microscopy Core Facility
is parent organization of: University of California at Santa Cruz Plasma Analytical Laboratory Core Facility
is parent organization of: University of California at Santa Cruz Marine Analytical Laboratory Core Facility
is parent organization of: University of California at Santa Cruz Stable Isotope Laboratory Core Facility
is parent organization of: UCSC Cell Browser
is parent organization of: miRCode
is parent organization of: tRNA Analysis of eXpression
nlx_63906, Wikidata:Q1047293, Crossref funder ID:100006358, grid.205975.c, ISNI:0000 0001 0740 6917 https://ror.org/03s65by71 SCR_011624 UCSC 2026-08-01 12:04:28 29

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