Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search

Filter by records added date
See new records

Options


Facets


Recent searches

Snippet view Table view
Click the to add this resource to a Collection

2 Results - per page

Show More Columns | Download 2 Result(s)

Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Mass spectrometry imaging workbench
 
Resource Report
Resource Website
50+ mentions
Mass spectrometry imaging workbench (RRID:SCR_017410) data analysis software, software application, software resource, data processing software Software tool for analysis of mass spectrometry imaging data implemented in Galaxy framework. Provides options to analyze mass spectrometry imaging data in imzML file format, including quality control, visualization, preprocessing, statistical analysis, image co-registration and feature identification.Galaxy docker container for mass spectrometry imaging. Analysis, mass, spectrometry, imaging, data, Galaxy, framework, imzML, file, quality, control, visualization, statistics, docker, container is related to: University of Freiburg; Baden-Wurttemberg; Germany DOI:10.1101/628719 Free, Available for download, Freely available https://github.com/foellmelanie/docker-galaxy-msi, https://galaxyproject.org/use/msi/ SCR_017410 2026-08-06 09:29:04 98
University of Freiburg; Baden-Wurttemberg; Germany
 
Resource Report
Resource Website
University of Freiburg; Baden-Wurttemberg; Germany (RRID:SCR_004825) Uni Freiburg university Public research university located in Freiburg im Breisgau, Baden-Württemberg, Germany. is related to: MIP-DILI
is related to: Mass spectrometry imaging workbench
is related to: NanoGalaxy
is parent organization of: Images of the Drosophila Nervous System
is parent organization of: DTI and Fibertools Software Package
is parent organization of: EPILEPSIE database
is parent organization of: GraphProt
is parent organization of: ViBE-Z
is parent organization of: Electroencephalogram Database: Prediction of Epileptic Seizures
is parent organization of: University of Freiburg Bioinformatics Group: Servers and Web-Applications
is parent organization of: FlyBrain
is parent organization of: XuvTools
is parent organization of: MIRROR: FlyBrain, An Online Atlas and Database of the Drosophila Nervous System
is parent organization of: Braincon Platform Software
is parent organization of: GraphClust2
is parent organization of: meta
is parent organization of: University of Freiburg Life Imaging Center Core Facility
is parent organization of: PottersWheel
is parent organization of: FreemoVR project
is parent organization of: MutaRNA
is parent organization of: Data independent acquisition proteomics workbench
is parent organization of: University of Freiburg Magnetic Resonance Development and Application Center Core Facility
is parent organization of: University of Freiburg Medical Center Lighthouse Core Facility
is parent organization of: Freibox
is parent organization of: University of Freiburg Cryo-Electron Microscopy Core Facility
nlx_80780 http://www.uni-freiburg.de/start-en.html?set_language=en SCR_004825 Albert Ludwig University of Freiburg 2026-08-01 12:02:45 0

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X
  1. Neuroscience Information Framework Resources

    Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.