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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Bestus Bioinformaticus Merge Resource Report Resource Website 10+ mentions |
Bestus Bioinformaticus Merge (RRID:SCR_016970) | BBMerge | data processing software, data analysis software, software application, software resource | Software tool to merge two overlapping paired reads into a single read. Used in amplicon studies and in assembly, where longer reads allow the use of longer kmers or fewer comparisons. | merge, overlapping, read, single, amplicon, assembly, kmer, compare |
is listed by: Bestus Bioinformaticus Tools has parent organization: DOE Joint Genome Institute |
Freely Available, Open Source | SCR_016970 | BB Merge, BestusBioinformaticusMerge, Bestus Bioinformaticus Merge, BBMerge | 2026-08-01 12:05:58 | 37 | ||||||||
|
Bestus Bioinformaticus Tools Resource Report Resource Website 500+ mentions |
Bestus Bioinformaticus Tools (RRID:SCR_016968) | BBTools | data analysis software, software application, software resource, sequence analysis software, data processing software | Software suite of bioinformatics tools for analysis of DNA and RNA sequence data. Used for file formats such as fastq, fasta, sam, scarf, fasta plus qual, compressed or raw, with autodetection of quality encoding and interleaving. Written in Java and works on any platform supporting Java, including Linux, MacOS, and Microsoft Windows. | Software, Bioinformatic, Data analysis, sequencing, |
lists: BBmap lists: Bestus Bioinformaticus Duk lists: Bestus Bioinformaticus Merge lists: Reformat has parent organization: DOE Joint Genome Institute |
SCR_016968 | BB Tools, Bestus Bioinformaticus Tools, BBTools | 2026-08-01 12:05:58 | 591 | |||||||||
|
DOE Joint Genome Institute Resource Report Resource Website 500+ mentions |
DOE Joint Genome Institute (RRID:SCR_003045) | DOE JGI, JGI, | portal, organization portal, data or information resource | Institute to advance genomics in support of the DOE missions related to clean energy generation and environmental characterization and cleanup. Supported by the DOE Office of Science, the DOE JGI unites the expertise at Lawrence Berkeley National Laboratory, Lawrence Livermore National Laboratory, and the HudsonAlpha Institute for Biotechnology. The facility provides integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to these challenges. | genomics, sequencing, computational analysis, clean energy, environment, biotechnology, nucleotide sequence, protein, genome, bacteria, microorganism, fungal colony, fungal community, dna, phenotype, molecular biology, life science, genomics, genetics, nature, nurture, ecology, bioenergetics, high-throughput sequencing |
is listed by: re3data.org has parent organization: University of California; California; USA is parent organization of: Microbial Genetics Resource at JGI is parent organization of: JGI Genome Portal is parent organization of: Genomes Online Database is parent organization of: IMG System is parent organization of: Classifier for Metagenomic Sequences is parent organization of: MycoCosm is parent organization of: Plant Genome Resource at JGI is parent organization of: Classifier for Metagenomic Sequences is parent organization of: Phytozome is parent organization of: IMG is parent organization of: Metagenomics Program at JGI is parent organization of: Assembly Likelihood Estimator is parent organization of: 1000 Fungal Genome Project is parent organization of: Bestus Bioinformaticus Tools is parent organization of: Bestus Bioinformaticus Duk is parent organization of: Bestus Bioinformaticus Merge is parent organization of: Reformat |
DOE | Free, Freely available | nif-0000-30425 | SCR_003045 | DOE Joint Genome Institute - Enabling Advances in Bioenergy & Environmental Research, Department of Energy Joint Genome Institute, Joint Genome Institute | 2026-08-01 12:08:32 | 689 |
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