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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
viridis
 
Resource Report
Resource Website
10+ mentions
viridis (RRID:SCR_016696) software resource, software toolkit Software package which brings to R color scales. Created for the Python matplotlib library. R, color, scale, Python, matplotlib, CRAN is affiliated with: R Project for Statistical Computing
is affiliated with: CRAN
Free, Available for download, Freely available https://github.com/sjmgarnier/viridis SCR_016696 2026-09-03 05:04:39 30
R Project for Statistical Computing
 
Resource Report
Resource Website
10000+ mentions
R Project for Statistical Computing (RRID:SCR_001905) R software resource Software environment and programming language for statistical computing and graphics. R is integrated suite of software facilities for data manipulation, calculation and graphical display. Can be extended via packages. Some packages are supplied with the R distribution and more are available through CRAN family.It compiles and runs on wide variety of UNIX platforms, Windows and MacOS. R software, statistical, computing, graphics, programming, language, bio.tools is used by: UTR
is used by: MSstats
is used by: CummeRbund
is used by: deFuse
is used by: JASP
is used by: Boruta
is used by: NMRProcFlow
is used by: PlotsOfData
is used by: rtransparent
is used by: shinyCircoss
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is affiliated with: CRAN
is affiliated with: factoextra
is affiliated with: dendsort
is affiliated with: viridis
is affiliated with: RColorBrewer
is affiliated with: statmod
is related to: Sweave
is related to: rOpenSci
is related to: R Manuals
is related to: Bioconductor
is related to: ggplot2
is related to: madsim
is related to: Solas
is related to: braincog
is related to: clustree
is related to: PhenoSpD
is related to: geomorph
is related to: NeuroAnatomy Toolbox
is related to: dplyr
is related to: glmmADMB
is related to: clusterProfiler
is related to: ropls
is related to: mixOmics
is related to: FlowSOM
is related to: Rtsne
is related to: scran
is related to: Rsubread
is related to: riboSeqR
is related to: Biostrings
is related to: riboWaltz
is related to: GenomicFeatures
is related to: devtools
is related to: affy
is related to: affydata
is related to: Heatmapper
is related to: toxprofileR
is related to: LTRpred
is related to: RaceID
is related to: PRSice
is related to: Genomic Ranges
is related to: Goseq
is related to: GAGE
is related to: metagear
is related to: pagoda2
is related to: dndSCV
is related to: tidyr
is related to: ClustVis
is related to: IDR
is related to: NeuroAnatomy Toolbox
is related to: rjags
is related to: gProfiler2
is related to: knitr
is related to: EpiEstim
is related to: Minimum-Hypergeometric Test
is related to: Network-Based R-Statistics
is related to: seqpac
is related to: survminer
is related to: Vector Generalized Linear and Additive Models
is related to: LEA
is related to: StAMPP
is related to: Betareg
is related to: Harrell Miscellaneous
is related to: simplePHENOTYPES
is related to: Bayesian Generalized Linear Regression
is related to: ranger
is related to: h2o4gpu
is related to: ridge regression Best Linear Unbiased Prediction
is related to: Classification And Regression Training
is related to: Rphenograph
is related to: Peptides
is related to: taxize
is related to: seqinr
is related to: reshape2
is related to: monaLisa
is related to: mia
is related to: Rtsne
is related to: R package:stats-package
is related to: R package: maxstat
is related to: stats
PMID:18252159 SCR_021974, nif-0000-10474, OMICS_01147, biotools:r https://cran.r-project.org/src/base/R-3/, https://bio.tools/r SCR_001905 R software, The R Project for Statistical Computing, R project, R Project, R, R version 3.5.1, R Package, R-3, R version 3.6.1, R Project for Statistical Computing 2026-09-03 04:45:08 52118
CRAN
 
Resource Report
Resource Website
5000+ mentions
CRAN (RRID:SCR_003005) CRAN software repository, software resource Network of ftp and web servers around world that store identical, up to date, versions of code and documentation for R. Package archive network for R programming language. network, ftp, web, server, code, documentation, mirror, R lists: lme4
lists: R package: nlme
lists: R package: lmerTest
lists: R package: RVAideMemoire
lists: R package: LMERConvenienceFunctions
lists: R package: psy
lists: R package: lattice
lists: geomorph
lists: Sequenza
lists: NeuroAnatomy Toolbox
lists: dplyr
lists: Prophet
lists: metagear
lists: tidyr
lists: Mediation Analysis of Causality under Confounding
lists: MIIVsem
lists: rjags
lists: GENEPOP
lists: webchem
lists: cowplot
lists: readxl
lists: biomod2
lists: multcomp
lists: knitr
lists: ggtree
lists: Minimum-Hypergeometric Test
lists: meta
lists: Network-Based R-Statistics
lists: pavo
lists: Modern Applied Statistics with S
lists: cvequality
lists: openxlsx
lists: tidyverse
lists: Genomic Annotation in Livestock for positional candidate LOci
lists: igraph
lists: SIMR
lists: gbs2ploidy
lists: vioplot
lists: spdep
lists: maps
lists: Differential Gene Correlation Analysis
lists: ez
lists: celltrackR
lists: rentrez
lists: pepr
lists: survival
lists: ggpubr
lists: Signac
lists: rstatix
lists: ggalluvial
lists: purrr
lists: gtsummary
lists: questionr
lists: powereQTL
lists: RSurveillance
lists: epiR
lists: psych
lists: CCP
lists: yacca
lists: DHARMa
lists: Companion to Applied Regression
lists: Peptides
lists: taxize
lists: seqinr
lists: reshape2
lists: mvabund
lists: CpGassoc
lists: metaMA
lists: ComplexUpset
lists: eulerr
lists: shinyhelper
lists: shinythemes
lists: philentropy
lists: lwgeom
lists: stringr
lists: ordinal
lists: msigdbr
lists: meta4diag
lists: Rtrack
lists: ggsignif
lists: Corrplot
lists: immunarch
lists: Algorithms and Framework for Nonnegative Matrix Factorization
lists: Computing Chance Corrected Agreement Coefficients
lists: Intraclass Correlations for Quantifying Inter Rater Reliability
lists: Regression Modeling Strategies
lists: caret
lists: AICcmodavg
lists: RHRV
lists: FFTrees
lists: Simple Features
lists: rworldmap
lists: eHDprep
lists: vcfR
lists: vtree
lists: SimplyAgree
lists: randomizeR
lists: DiagrammeR
lists: forestplot
lists: merTools
lists: clusterSim
lists: bibliometrix
lists: Rtsne
lists: brms
lists: oncoPredict
lists: epitools
lists: DrugSim2DR
lists: rstanarm
lists: scCustomize
lists: corrplot
lists: Parsnip
lists: ggbreak
lists: FactoMineR
lists: tidycmprsk
lists: BioCircos
lists: Matrix based Flexible Project Planning
is affiliated with: R Project for Statistical Computing
is affiliated with: factoextra
is affiliated with: dendsort
is affiliated with: viridis
is affiliated with: RColorBrewer
is affiliated with: statmod
is affiliated with: ANOCVA
is related to: flowBin
is related to: CorMut
is related to: VariantAnnotation
is related to: timecourse
is related to: RmiR.Hs.miRNA
is related to: PSCBS
is related to: sybil - Efficient Constrained Based Modelling in R
is related to: categoryCompare
is related to: clValid
is related to: pheatmap
is related to: RaceID
is related to: BRASS
is related to: IDR
is related to: ascend
is related to: brainGraph
is related to: GBM R package
is related to: Phangorn
is related to: ape
is related to: missForest
is related to: trend
is related to: precrec
is related to: EHRtemporalVariability
is related to: emmeans
is related to: reshape
is related to: variancePartition
is related to: SimFFPE
is related to: FilterFFPE
is related to: shinyCircoss
is related to: Betareg
is related to: ggeffects
is related to: Harrell Miscellaneous
is related to: simplePHENOTYPES
is related to: Bayesian Generalized Linear Regression
is related to: ranger
is related to: h2o4gpu
is related to: ridge regression Best Linear Unbiased Prediction
is related to: Classification And Regression Training
is related to: ggforce
is related to: janitor
is related to: Rphenograph
is parent organization of: Postgwas
is parent organization of: MetaDE
is parent organization of: MCMC.qpcr
is parent organization of: PurBayes
is parent organization of: circlize
is parent organization of: neuRosim
is parent organization of: metaRNASeq
is parent organization of: RankAggreg
is parent organization of: DEMI
is parent organization of: Iterative Signature Algorithm
is parent organization of: MUMA
is parent organization of: VennDiagram
is parent organization of: ExomeDepth
is parent organization of: FisHiCal
is parent organization of: CNVassoc
is parent organization of: aCGH.Spline
is parent organization of: Isopat
is parent organization of: enviPat
is parent organization of: Parametric Time Warping
is parent organization of: enviPick
is parent organization of: pairheatmap
is parent organization of: RCircos
is parent organization of: MultiPhen
is parent organization of: aLFQ
is parent organization of: MetaQC
is parent organization of: YuGene
is parent organization of: Kdetrees
is parent organization of: ggplot2
is parent organization of: R package inTrees
is parent organization of: ggrepel
hosts: MSM
nif-0000-30270 http://cran.r-project.org/mirrors.html SCR_003005 the Comprehensive R Archive Network, Comprehensive R Archive Network, The Comprehensive R Archive Network 2026-09-03 05:04:19 7039

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