Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Hipposeq Resource Report Resource Website 10+ mentions |
Hipposeq (RRID:SCR_015730) | data analysis software, data or information resource, data processing software, database, sequence analysis software, software application, software resource, web application | Database of RNA-seq gene expression in hippocampal principal neurons. Hipposeq can analyze and visualize RNA-seq data for all excitatory cell populations in the hippocampus at multiple levels of granularity. | rna seq, gene expression, sequencing, hippocampus, principal neuron |
has parent organization: Janelia Research has parent organization: Howard Hughes Medical Institute |
Howard Hughes Medical Institute | PMID:27113915 | Freely available | SCR_015730 | Hippocampus RNA-seq atlas | 2026-09-05 06:27:58 | 32 | |||||||
|
Janelia Research Resource Report Resource Website 1+ mentions |
Janelia Research (RRID:SCR_004257) | Janelia Research | data or information resource, organization portal, portal, software resource | HHMI Center for integrated teams of lab scientists and tool builders to share methods, results, and tools with the scientific community. Janelia Research campus is a research campus of the Howard Hughes Medical Institute located in Ashburn, Virginia. | HHMI, integrated, team, scientist, tool, build, share, method, result, medical |
lists: Frealign is related to: Virtual Fly Brain is related to: CTFFIND has parent organization: Howard Hughes Medical Institute is parent organization of: Skylign is parent organization of: Eddy Lab Software is parent organization of: Hanchuan Peng Shared Software is parent organization of: Fly EM is parent organization of: Vaa3D is parent organization of: Volume image object AnNOtation System is parent organization of: Hmmer is parent organization of: Neuroptikon is parent organization of: V3D is parent organization of: Infernal is parent organization of: Paper Rejection Repository is parent organization of: Neurodata Without Borders is parent organization of: Hipposeq is parent organization of: Janelia: Tip-Tilt-Z Sample Positioner is parent organization of: MouseLight Project is parent organization of: MouseLight Neuron Browser |
nlx_26970 | SCR_004257 | Janelia Farm Research Campus, Janelia, Janelia Farm, Janelia Research Campus, HHMI Janelia Farm Research Campus, Janelia Research | 2026-09-05 06:30:39 | 9 | ||||||||
|
Howard Hughes Medical Institute Resource Report Resource Website 100+ mentions |
Howard Hughes Medical Institute (RRID:SCR_011281) | HHMI | institution | Nonprofit medical research organization that ranks as one of the nation's largest philanthropies for advancing biomedical research and science education in the United States. Known for its scientific research and modern architecture. | institution, medical, research, nonprofit, biomedical, USA |
is related to: Beta Cell Biology Consortium is related to: Falcon has parent organization: United States Department of Health and Human Services granting agency is parent organization of: Janelia Research is parent organization of: Biointeractive is parent organization of: Open Access Series of Imaging Studies is parent organization of: DIADEM Challenge: DIgital reconstruction of Axonal and DEndritic Morphology (DIADEM) Software Development Competition is parent organization of: iBioSeminars is parent organization of: neurospy is parent organization of: Jackal is parent organization of: DelPhi is parent organization of: Eddy Lab Software is parent organization of: Hipposeq is parent organization of: MIMMS microscope 1.0 (2016) is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Light Microscopy Core Facility is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Flow Cytometry Shared Resource Core Facility is parent organization of: Modular LED Displays project is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Viral Tools Shared Resource Core Facility is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Immortalized Cell Line Culture Shared Resource Core Facility is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Molecular Genomics Shared Resource Core Facility is parent organization of: Howard Hughes Medical Institute at Janelia Research Campus Janelia Experimental Technology jET Core Facility |
Wikidata: Q1512226, Crossref funder ID: 100000011, ISNI: 0000 0001 2167 1581, grid.413575.1, nlx_98347 | https://ror.org/006w34k90 | SCR_011281 | Howard Hughes Medical Institute | 2026-09-05 06:27:00 | 228 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.