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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
European ribosomal RNA database Resource Report Resource Website 500+ mentions |
European ribosomal RNA database (RRID:SCR_012735) | data or information resource, database | Database compiles all complete or nearly complete SSU (small subunit) and LSU (large subunit) ribosomal RNA sequences. Sequences are provided in aligned format. Alignment takes into account secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure modles and nucleotide variability maps, is also available. | ribosomal RNA sequences, small subunit, large subunit, aligned format sequences, literature references, taxonomy, secondary structure modles, nucleotide variability maps, |
is related to: SILVA has parent organization: Ghent University; Ghent; Belgium |
Free, Freely available | nif-0000-02820 | http://www.psb.ugent.be/rRNA/ | SCR_012735 | European ribosomal RNA database, SILVA rRNA database, SILVA - high quality ribosomal RNA databases | 2026-08-01 12:10:04 | 653 | |||||||
|
SILVA Resource Report Resource Website 10000+ mentions |
SILVA (RRID:SCR_006423) | data or information resource, database | High quality ribosomal RNA databases providing comprehensive, quality checked and regularly updated datasets of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences for all three domains of life (Bacteria, Archaea and Eukarya). Supplementary services include a rRNA gene aligner, online tools for probe and primer evaluation and optimized browsing, searching and downloading on the website. The extensively curated SILVA taxonomy and the new non-redundant SILVA datasets provide an ideal reference for high-throughput classification of data from next-generation sequencing approaches. Alignment tool, SINA, is available for download as well as available for use online. | ribosomal rna, gene sequence, gene, sequence, alignment, taxonomy, 16s, 18s, 23s, 28s, phylogeny, probe, primer, alignment service, fish, arb, ribocon, geoblast, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian is affiliated with: RNAcentral is related to: ARB project is related to: SINA is related to: European ribosomal RNA database has parent organization: German Collection of Microorganisms and Cell Cultures |
German Collection of Microorganisms and Cell Cultures | PMID:23193283 PMID:24293649 PMID:17947321 |
biotools:silva, OMICS_01514, nif-0000-03464, r3d100011323, rid_000103 | https://bio.tools/silva, https://doi.org/10.17616/R3FP60 | SCR_006423 | SILVA rRNA database, SILVA - high quality ribosomal RNA databases | 2026-08-01 12:09:52 | 13429 | ||||||
|
Ghent University; Ghent; Belgium Resource Report Resource Website 1+ mentions |
Ghent University; Ghent; Belgium (RRID:SCR_012892) | UGent | university, institution | Public research university located in Ghent, Belgium. One of the biggest Flemish universities. |
is parent organization of: TAPIR: target prediction for plant microRNAs is parent organization of: PiNGO is parent organization of: Git2PROV is parent organization of: BiNGO: A Biological Networks Gene Ontology tool is parent organization of: Magic is parent organization of: geNORM is parent organization of: RTPrimerDB- The Real-Time PCR and Probe Database is parent organization of: Belgian Co-Ordinated Collections Of Micro-Organisms: GeneCorner Plasmid Collection is parent organization of: StrainInfo.net Bioportal is parent organization of: BrainPeps is parent organization of: Bioinformatics Gent is parent organization of: Evex is parent organization of: European ribosomal RNA database is parent organization of: ENIGMA is parent organization of: VIB Compound Screening Facility is parent organization of: Online Resource for Community Annotation of Eukaryotes is parent organization of: stop-signal task resources is parent organization of: Liver cell atlas is parent organization of: Unipept |
nlx_86710 | SCR_012892 | Ghent University | 2026-08-01 12:12:04 | 1 |
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