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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
MRIcro Software
 
Resource Report
Resource Website
500+ mentions
MRIcro Software (RRID:SCR_008264) data processing software, software application, data visualization software, data analysis software, software resource MRIcro allows Windows and Linux computers view medical images. It is a standalone program, but includes tools to complement SPM (software that allows neuroimagers to analyze MRI, fMRI and PET images). MRIcro allows efficient viewing and exporting of brain images. In addition, it allows neuropsychologists to identify regions of interest (ROIs, e.g. lesions). MRIcro can create Analyze format headers for exporting brain images to other platforms. Some features of MRIcro are: - Converts medical images to SPM friendly Analyze format. - View Analyze format images (big or little endian). - Create Analyze format headers (big or little endian). - Create 3D regions of interest (with computed volume & intensity). - Overlap multiple regions of interest. - Rotate images to match SPM template images. - Export images to BMP, JPEG, PNG or TIF format. - Yoked images: linked viewing of multiple images (e.g. view same coordinates of PET and MRI scans). Users familiar with other Windows programs will find that this software is fairly straightforward to use. Resting the mouse cursor over a button will cause a text hint to appear over the button. However, a tutorial with a step by step guide of how to use MRIcro with SPM is available. export, fmri, 3d, brain, intensity, lesions, medical, mri, neuroimager, neuropsychologist, pet, platform, region, software, view, volume, image is related to: SPM
has parent organization: Georgia Institute of Technology; Georgia; USA
nif-0000-23298 SCR_008264 MRIcro 2026-08-05 10:44:58 896
Georgia Institute of Technology; Georgia; USA
 
Resource Report
Resource Website
1+ mentions
Georgia Institute of Technology; Georgia; USA (RRID:SCR_011225) GT institution Georgia Institute of Technology, commonly referred to as Georgia Tech or, in the state of Georgia, as Tech, is a public research university and institute of technology in Atlanta, Georgia. uses: Scizzle
is related to: Clinical and Translational Science Awards Consortium
is parent organization of: UnSplicer
is parent organization of: Georgia Institute of Technology Labs and Facilities
is parent organization of: BroadPeak
is parent organization of: omniBiomarker
is parent organization of: MRIcro Software
is parent organization of: Structure modeling of 907 G protein coupled receptors in the human genome
is parent organization of: Disease State Prediction
is parent organization of: R-SAP
is parent organization of: GeneMark
is parent organization of: GeneTack
is parent organization of: Georgia Tech Magnetic Resonance Laboratory
is parent organization of: Georgia Tech Center for Organic Photonics and Electronics
is parent organization of: Small-world Network Analysis and Partitioning
is parent organization of: GoMiner
is parent organization of: Georgia Center for Diabetes Translation Research
is parent organization of: GeneMarkS-T
is parent organization of: Translational Research in Neuroimaging and Data Science datasets
is parent organization of: ProtHint
is parent organization of: Georgia Institute of Technology Partnership for an Advanced Computing Environment Core Facility
is parent organization of: Georgia Institute of Technology AI Makerspace Core Facility
grid.213917.f, ISNI: 0000 0001 2097 4943, nlx_24803, Wikidata: Q864855, Crossref funder ID: 100006778 https://ror.org/01zkghx44 SCR_011225 Georgia Tech, Georgia Institute of Technology 2026-08-01 12:04:21 2
SPM
 
Resource Report
Resource Website
5000+ mentions
Issue
SPM (RRID:SCR_007037) SPM data processing software, image analysis software, software application, data analysis software, software resource Software package for analysis of brain imaging data sequences. Sequences can be a series of images from different cohorts, or time-series from same subject. Current release is designed for analysis of fMRI, PET, SPECT, EEG and MEG. analysis, brain, imaging, data, sequence, fMRI, PET, SPECT, EEG, MEG, bio.tools uses: Neuroimaging Data Model
uses: imcalc: SPM batch image calculator
is used by: rsfMRI_fconn calculation
is used by: Automatic Analysis
is used by: auto_acpc_reorient
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC)
is listed by: 3DVC
is listed by: Debian
is listed by: bio.tools
is listed by: SoftCite
is affiliated with: Clinical Toolbox for SPM
is affiliated with: Statistical non-Parametric Mapping
is related to: WFU Biological Parametric Mapping Toolbox
is related to: vis: SPM Visualized Statistics toolbox
is related to: LEAD-DBS
is related to: CCHMC Pediatric Brain Templates
is related to: IBMA toolbox
is related to: ArtRepair for robust fMRI
is related to: ASL data processing tool box
is related to: BrainVISA / Anatomist
is related to: MRIcro Software
is related to: xjView: A Viewing Program For SPM
is related to: BrainMagix SPM Viewer
is related to: MarsBaR region of interest toolbox for SPM
is related to: NIRS-SPM
is related to: SPM SS - fMRI functional localizers
is related to: Wisconsin White Matter Hyperintensities Segmentation Toolbox
is related to: Dementia-specific FDG PET Template for SPM analyses
is related to: SPM Anatomy Toolbox
is related to: MIPAV: Medical Image Processing and Visualization
is related to: MATLAB
is related to: hMRI-toolbox
is related to: Sandwich Estimator Toolbox
has parent organization: University College London; London; United Kingdom
is required by: MRTool
provides: TSDiffAna
has plug in: ICN_Atlas
works with: UManitoba - JHU Functionally Defined Human White Matter Atlas
works with: NIAG Addiction Data
works with: ICN_Atlas
works with: spm_auto_reorient_coregister
works with: Computational Anatomy Toolbox for SPM
works with: FieldTrip
works with: POAS4SPM
Free, Available for download, Freely available biotools:SPM https://github.com/spm/spm12, https://bio.tools/SPM https://www.fil.ion.ucl.ac.uk/spm/ SCR_007037 Statistical Parametric Mapping, SPM5, SPM2, SPM12, Statistical Parametric Mapping Software, SPM99, SPM8, SPM, SPM96 2026-08-05 10:44:35 8694

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