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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
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FlyAtlas: the Drosophila gene expression atlas Resource Report Resource Website 100+ mentions |
FlyAtlas: the Drosophila gene expression atlas (RRID:SCR_005032) | FlyAtlas | atlas, data or information resource, expression atlas | FlyAtlas gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly? For each gene and tissue, you''re given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed). The dataset so far comprises 44 Affymetrix Dros2 expression arrays, each mapping the expression of 18770 transcripts - corresponding to the vast majority of known Drosophila genes. The dataset thus contains over 822800 separate datapoints. This website is intended to make the data easily accessible and comprehensible to mere mortals. FlyAtlas provides the most comprehensive view yet of expression in multiple tissues of Drosophila melanogaster. Meta-analysis of the data shows that a significant fraction of the genome is expressed with great tissue specificity in the adult, demonstrating the need for the functional genomic community to embrace a wide range of functional phenotypes. Well-known developmental genes are often reused in surprising tissues in the adult, suggesting new functions. The homologs of many human genetic disease loci show selective expression in the Drosophila tissues analogous to the affected human tissues, providing a useful filter for potential candidate genes. Additionally, the contributions of each tissue to the whole-fly array signal can be calculated, demonstrating the limitations of whole-organism approaches to functional genomics and allowing modeling of a simple tissue fractionation procedure that should improve detection of weak or tissue-specific signals. | adult, wild-type, canton s, brain, head, eye, thoracicoabdominal ganglion, salivary gland, crop, midgut, hindgut, heart, ovary, fat body, testis, male accessory glands, virgin spermatheca, mated spermatheca spermatheca, carcass, cns, salivary gland, tubule, larval, s2 cells, whole fly |
is related to: OpenFlyData.org has parent organization: University of Glasgow; Glasgow; United Kingdom |
BBSRC | PMID:17534367 | nlx_98284 | SCR_005032 | SciCrunch Registry | 2026-10-31 12:14:03 | 114 | |||||||
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University of Glasgow; Glasgow; United Kingdom Resource Report Resource Website 1+ mentions |
University of Glasgow; Glasgow; United Kingdom (RRID:SCR_011646) | university | Founded in 1451, the University of Glasgow is the fourth oldest university in the English-speaking world. Today we are a broad-based, research intensive institution with a global reach. |
is affiliated with: OpenMinTeD is related to: Pharma-Planta Consortium is related to: EMIF is parent organization of: FlyAtlas: the Drosophila gene expression atlas is parent organization of: Vanator is parent organization of: MetAssign is parent organization of: NanoAmpli-Seq is parent organization of: University of Glasgow Cancer Sciences Flow Cytometry Core Facility |
nlx_29645, Wikidata:Q192775, grid.8756.c, ISNI:0000 0001 2193 314X, Crossref funder ID:501100000853 | https://ror.org/00vtgdb53 | SCR_011646 | SciCrunch Registry | University of Glasgow; Glasgow; Scotland, University of Glasgow, University of Glasgow; Scotland; United Kingdom | 2026-10-31 12:15:26 | 2 | |||||||||
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OpenFlyData.org Resource Report Resource Website |
OpenFlyData.org (RRID:SCR_004807) | OpenFlyData.org | data access protocol, data or information resource, database, image collection, software resource, web service | A cross-database search service for Drosophila gene expression data, including microarray data from FlyAtlas and in situ images from BDGP and Fly-TED. The applications provide different ways to search for and compare gene expression data for the fruit fly Drosophila melanogaster. You may Search Gene Expression Data by Gene, Gene Batch, and by Tissue Expression Profile. A number of Web services (SPARQL endpoints) are provided from this site which may be queried programmatically for data. | microarray, in situ, gene expression, gene, open fly data, openflydata, openflydata, expression, in situ hybridization |
is related to: FlyAtlas: the Drosophila gene expression atlas is related to: Berkeley Drosophila Genome Project has parent organization: FlyWeb Project |
JISC | PMID:20382263 | nlx_79461 | SCR_004807 | SciCrunch Registry | open fly data, OpenFlyData, openflydata | 2026-10-31 12:13:58 | 0 |
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