Searching the RRID Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
GENO3D Resource Report Resource Website 50+ mentions |
GENO3D (RRID:SCR_003183) | GENO3D | analysis service resource, service resource, data analysis service, production service resource | An automatic web server for protein molecular modelling. Starting with a query protein sequence, the server performs the homology modelling in six successive steps: (i) identify homologous proteins with known 3D structures by using PSI-BLAST; (ii) provide the user all potential templates through a very convenient user interface for target selection; (iii) perform the alignment of both query and subject sequences; (iv) extract geometrical restraints (dihedral angles and distances) for corresponding atoms between the query and the template; (v) perform the 3D construction of the protein by using a distance geometry approach and (vi) finally send the results by e-mail to the user. The strategy used in Geno3D is comparative protein structure modelling by spatial restraints (distances and dihedral) satisfaction. | protein, molecular modeling, 3d model, homology, comparative protein structure modelling | has parent organization: Claude Bernard University Lyon 1; Lyon; France | Ministere de la recherche ; Programme Bioinformatique inter-EPST ; CNRS ; IMABIO ; COMI ; GENOME ; Region Rhone-Alpes |
PMID:11836238 | Free, Freely available | nif-0000-30608 | SCR_003183 | 2026-08-14 09:24:46 | 62 | ||||||
|
Claude Bernard University Lyon 1; Lyon; France Resource Report Resource Website 1+ mentions |
Claude Bernard University Lyon 1; Lyon; France (RRID:SCR_011158) | University Lyon 1, Université Lyon 1 | university | Public university in Villeurbanne, France. |
is parent organization of: MatrixDB is parent organization of: GENO3D is parent organization of: Polymorphix is parent organization of: VirHostNet: Virus-Host Network is parent organization of: EMGlib - Enhanced Microbial Genomes Library is parent organization of: HCVDB - Hepatitis C Virus Database is parent organization of: Homologous Invertebrate Genes Database is parent organization of: Hoppsigen is parent organization of: HOVERGEN: Database of homologous vertebrate genes is parent organization of: Ancient conserved untranslated sequences is parent organization of: Homologous Sequences in Ensembl Animal Genomes |
nlx_20388 | SCR_011158 | Universite Claude Bernard Lyon 1, Université Claude Bernard Lyon 1, University Lyon 1, Claude Bernard University Lyon 1, University Claude Bernard Lyon 1 | 2026-08-08 11:59:27 | 5 |
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the facets that you can filter the data by.
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.
Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web. We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.
