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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
CBS Prediction Servers Resource Report Resource Website 100+ mentions |
CBS Prediction Servers (RRID:SCR_002874) | web service, software resource, production service resource, data access protocol, service resource, data analysis service, analysis service resource | A portal to the on-line prediction services at Center for Biological Sequence Analysis. All of the servers are available as interactive input forms, and most of the servers are also available as stand-alone software packages with the same functionality. Ready-to-ship packages exist for the most common UNIX platforms. In addition, for some servers, programmatic access is provided in the form of SOAP-based Web Services. | nucleotide sequence, amino acid sequence, prediction service, web service, biological sequence analysis, data analysis service, stand alone software |
has parent organization: Technical University of Denmark; Lyngby; Denmark is parent organization of: NetNGlyc is parent organization of: DictyOGlyc is parent organization of: YinOYang is parent organization of: NetOGlyc is parent organization of: HMMgene |
Center for Biological Sequence Analysis | Free, Freely available | nif-0000-25555 | SCR_002874 | 2026-08-02 09:03:47 | 456 | ||||||||
|
Technical University of Denmark; Lyngby; Denmark Resource Report Resource Website |
Technical University of Denmark; Lyngby; Denmark (RRID:SCR_011559) | DTU | institution, university | Engineering institution in Kongens Lyngby, north of Copenhagen, Denmark. It was founded in 1829 as first polytechnic in Denmark. | engineering, institution, Denmark, polytechnic |
is related to: European Lead Factory is related to: READNA is related to: Open PHACTS is parent organization of: DTU Multi-Assay Core is parent organization of: THOR Center for Neuroinformatics is parent organization of: Brede Wiki is parent organization of: GeneWiz browser is parent organization of: CBS Prediction Servers is parent organization of: Brede Database is parent organization of: DTU Center for Biological Sequence Analysis is parent organization of: BLASTatlas - Mapping of whole genome homology is parent organization of: ERPwavelab is parent organization of: Comstat is parent organization of: Sequenza is parent organization of: RNAmmer is parent organization of: NetPhos is parent organization of: BepiPred-2.0 is parent organization of: TargetP |
nlx_14187 | SCR_011559 | Danmarks Tekniske Universitet | 2026-08-02 09:06:01 | 0 | ||||||||
|
NetOGlyc Resource Report Resource Website 500+ mentions |
NetOGlyc (RRID:SCR_009026) | NetOGlyc | software resource, production service resource, service resource, software application, data analysis service, analysis service resource | Server that produces predictions of mucin-type GalNAc O-glycosylation sites in mammalian proteins. | neural network, predict, mucin, galnac, o-glycosylation site, protein, o-glycosylation, glycoprotein, o-glycoproteome, glycosite, proteome, bio.tools |
is listed by: Debian is listed by: bio.tools has parent organization: CBS Prediction Servers |
PMID:23584533 | Acknowledgement requested | nlx_153864, biotools:netoglyc | https://bio.tools/netoglyc | SCR_009026 | NetOGlyc Server | 2026-08-02 09:05:33 | 601 | |||||
|
NetNGlyc Resource Report Resource Website 1000+ mentions |
NetNGlyc (RRID:SCR_001570) | NetNGlyc | software resource, production service resource, service resource, software application, data analysis service, analysis service resource | Server that predicts N-Glycosylation sites in human proteins using artificial neural networks that examine the sequence context of Asn-Xaa-Ser/Thr sequons. NetNGlyc 1.0 is also available as a stand-alone software package, with the same functionality as the service above. Ready-to-ship packages exist for the most common UNIX platforms. | predict, n-glycosylation site, human, protein, neural network, sequence, asn-xaa-ser/thr sequon, glycoprotein, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: CBS Prediction Servers |
Free, Freely available | nlx_153863, biotools:netnglyc | https://bio.tools/netnglyc | SCR_001570 | NetNGlyc Server | 2026-08-02 09:03:05 | 1753 | ||||||
|
YinOYang Resource Report Resource Website 100+ mentions |
YinOYang (RRID:SCR_001605) | YinOYang | software resource, production service resource, service resource, software application, data analysis service, analysis service resource | Server that produces neural network predictions for O-beta-GlcNAc attachment sites in eukaryotic protein sequences. This server can also use NetPhos, to mark possible phosphorylated sites and hence identify Yin-Yang sites. YinOYang 1.2 is available as a stand-alone software package, with the same functionality. Ready-to-ship packages exist for the most common UNIX platforms. | neural network, prediction, o-beta-glcnac attachment site, protein sequence, protein, sequence, glycosylation site, proteome, post-translational modification, protein function, glycoprotein, bio.tools |
uses: NetPhos is listed by: bio.tools is listed by: Debian has parent organization: CBS Prediction Servers |
Danish National Research Foundation | PMID:11928486 | Free, Freely available | nlx_153865, biotools:yinoyang | https://bio.tools/yinoyang | SCR_001605 | 2026-08-02 09:03:11 | 111 | |||||
|
DictyOGlyc Resource Report Resource Website 10+ mentions |
DictyOGlyc (RRID:SCR_001600) | DictyOGlyc | production service resource, data analysis service, service resource, analysis service resource | Server that produces neural network predictions for GlcNAc O-glycosylation sites in Dictyostelium discoideum proteins. | glcnac glycosylation site, neural network, o-glycosylation, prediction, proteome, glycoprotein, glcnac, sequence, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: CBS Prediction Servers |
Deutscher Akademischer Austauschdienst ; HspII/AUFE ; Macquarie University International Postgraduate Research Award ; Australian Research Council ; National Health and MRC ; Danish National Research Foundation |
PMID:10521537 | Free, Freely available | nlx_153856, biotools:dictyoglyc | https://bio.tools/dictyoglyc | SCR_001600 | 2026-08-02 09:03:05 | 14 | |||||
|
HMMgene Resource Report Resource Website 10+ mentions |
HMMgene (RRID:SCR_011933) | HMMgene | production service resource, data analysis service, service resource, analysis service resource | Data analysis service for prediction of vertebrate and C. elegans genes. | gene |
is listed by: OMICtools has parent organization: CBS Prediction Servers |
OMICS_01488 | SCR_011933 | 2026-08-02 09:06:04 | 11 |
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