Searching the RRID Resource Information Network

Our searching services are busy right now. Please try again later

  • Register
X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X

Leaving Community

Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.

No
Yes

Preparing word cloud

×

SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

Search

Type in a keyword to search
Reset search
Filter by records added date

See new records

Options

Facets

Recent searches

Snippet view Table view

Can't find the RRID you're searching for? X
Click the to add this resource to a Collection

2 Results - per page

Show More Columns | Download 2 Result(s)

Resource Name

Sort Ascending

Sort Descending

 Proper Citation

Sort Ascending

Sort Descending

 Abbreviations

Sort Ascending

Sort Descending

 Resource Type

Sort Ascending

Sort Descending

 Description
Keywords

Sort Ascending

Sort Descending

 Resource Relationships

Sort Ascending

Sort Descending

 Related Condition

Sort Ascending

Sort Descending

 Funding

Sort Ascending

Sort Descending

 Defining Citation

Sort Ascending

Sort Descending

 Availability
Specification URL
Alternate IDs
Alternate URLs
Old URLs
Parent Organization
Resource ID
Synonyms

Sort Ascending

Sort Descending

 Record Last Update

Sort Ascending

Sort Descending

 Mentions Count

Sort Ascending

Sort Descending
RettBASE: IRSF MECP2 Variation Database
 
Resource Report
Resource Website
10+ mentions 		RettBASE: IRSF MECP2 Variation Database (RRID:SCR_001066) data or information resource, database Database constructed by merging mutation and polymorphism data from the published literature pertaining to Rett syndrome and related clinical disorders, and by incorporating unpublished mutation and polymorphism data that have been submitted directly. RettBase is updated on a very frequent basis manually by curators to ensure the validity of the data submitted., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. genetics; metadata, polymorphism is listed by: 3DVC Rett Syndrome PMID:28544139 THIS RESOURCE IS NO LONGER IN SERVICE nif-0000-00156 SCR_001066 RettBase 2026-08-21 12:36:28 14
3DVC
 
Resource Report
Resource Website 		3DVC (RRID:SCR_001377) 3DVC community building portal, data or information resource, portal THIS RESOURCE IS NO LONGER IN SERVICE, confirmed by curator 11/21/2018; Community of researchers attempting to build a comprehensive virtual cell model. The 3DVC will do for cell biology what the Large Hadron Collider (LHC) does for particle physics, but through a virtual rather than physical resource. It will bring together collaborators around a shared infrastructure to advance the field through efficient groundbreaking science and technology, the results of which will be broadly disseminated to an audience ranging from K12 to professionals. The 3DVC is committed to open science, yet strives for sustainability through new business models that leverages that open content. cell, model, biological structure, molecule lists: Albinism database
lists: ButterflyBase
lists: G2P Knowledge Centre
lists: Bio-Job.org
lists: RettBASE: IRSF MECP2 Variation Database
lists: Resource for Biocomputing Visualization and Informatics
lists: National Center for Integrative Biomedical Informatics
lists: Genome Network Platform
lists: NeuroExplorer
lists: Open Provenance Model
lists: BarleyBase
lists: BioModels
lists: Arabidopsis Reactome
lists: MEDLINE
lists: bioDBcore
lists: GermOnline
lists: GlycoMapsDB
lists: SNPHunter
lists: Allen Institute for Brain Science Sleep Study
lists: Coddle-Codons Optimized to Discover Deleterious LEsions
lists: MicroArray and Gene Expression Markup Language
lists: Fungal Genome Initiative
lists: EMDataResource.org
lists: University of Southern California LONI Software
lists: Ontology Development and Information Extraction
lists: Software Distribution Sets
lists: L-Measure
lists: UCSF Chimera
lists: Zebrafish Neurophenome Project Database
lists: Standards-based Infrastructure with Distributed Resources
lists: HapMap 3 and ENCODE 3
lists: NCBI BioProject
lists: SEQanswers Wiki
lists: NIF Data Federation
lists: SMD
lists: SoyBase
lists: modelcrop.org
lists: BiGG Database
lists: FSST - Functional Similarity Search Tool
lists: LHP LHDL
lists: Open Provenance Model Vocabulary
lists: DiseaseMeth
lists: neuroVIISAS
lists: Predictive Networks
lists: SitEx
lists: NRCAM
lists: DisGeNET
lists: MCMBB
lists: BARD
lists: Mouse Genome Informatics (MGI)
lists: European Nucleotide Archive (ENA)
lists: Comparative Toxicogenomics Database (CTD)
lists: PomBase
lists: Stanford University HIV Drug Resistance Database
lists: Database of Chemical Compounds and Reactions in Biological Pathways
lists: UCSD-Nature Signaling Gateway Molecule Pages
lists: IntAct
lists: The WWW Virtual Library: Model Organisms
lists: Helicobacter Pylori Database of Protein Interactomes
lists: Genes to Cognition: Neuroscience Research Programme
lists: neuroConstruct
lists: ModelDB
lists: 3DViewnix
lists: TMRPres2D
lists: Ikaros Project
lists: Dockground: Benchmarks, Docoys, Templates, and other knowledge resources for DOCKING
lists: Interagency Modeling and Analysis Group
lists: Annozilla (Annotea on Mozilla)
lists: Artificial Selected Proteins/Peptides Database
lists: Cancer Chromosomes
lists: CATMA - Complete Arabidopsis Transcriptome MicroArray
lists: Combinatorial Extension (CE)
lists: ChemDB: The UC Irvine ChemDB
lists: CluSTr
lists: CTDatabase
lists: DRC - Database of Ribosomal Crosslinks
lists: Gene Expression in Tooth Database
lists: GenoBase
lists: GPX-Macrophage
lists: Hetero-compound Information Centre- Uppsala
lists: IMG
lists: InSatDb
lists: InterDom
lists: IPD-HPA - Human Platelet Antigens
lists: Max Planck Unified Proteome Database
lists: Molecular Modelling DataBase
lists: MegaMotifbase
lists: Metalloprotein Site Database
lists: MitoDat - Mendelian Inheritance and the Mitochondrion
lists: Madison Metabolomics Consortium Database
lists: Olfactory Receptor DataBase
lists: SUPERFAMILY
lists: EyeBrowse
lists: Allen Institute Mouse Diversity Study
lists: BIRD - Bio Info R and D
lists: Bioinformatics Links Directory
lists: Electroencephalogram Database: Prediction of Epileptic Seizures
lists: Human Protein-Protein Interaction Mining Tool
lists: Interagency Modeling and Analysis Group and Multi-scale Modeling Consortium Wiki
lists: Systems Biology Workbench
lists: CellML
lists: MathML
lists: AraCyc
lists: Biochemical Pathways database
lists: CellML Model Repository
lists: Cytokine Family Database
lists: Bacterial Genomes
lists: U.S. Pig Genome Project
lists: ComBase: A Combined Database For Predictive Microbiology
lists: GeneWindow
lists: Comprehensive Systems-Biology Database
lists: Candidate Genes to Inherited Diseases
lists: MeGX
lists: Mammalian Phosphorylation Resource
lists: Efficient Mixed-Model Association
lists: Proteome Analyst PA-GOSUB
lists: PubCrawler
lists: Conical: The Computational Neuroscience Class Library
lists: Gene Expression Profile Analysis Suite
lists: Adaptive Poisson-Boltzmann Solver
lists: Aggrescan: The Hot Spot Finder
lists: Distributed Annotation System
lists: COILS: Prediction of Coiled Coil Regions in Proteins
lists: DNAWorks at Helix Systems
lists: Microarray DB
lists: Gene Relationships Across Implicated Loci
lists: SEQtools
lists: DeRisi Lab
lists: Protein Subcellular Location Image Database
lists: Open Information Integration
lists: Metagenomics Program at JGI
lists: BrainPeps
lists: EGAN: Exploratory Gene Association Networks
lists: CBioC
lists: OrChem
lists: Generic GO Term Finder
lists: G-node portal electrophysiology data sharing
lists: LegumeIP
lists: Roadmap Epigenomics Project
lists: TrakEM2
lists: ATID: Alternative Translational Initiation Database
lists: linked life data - a semantic data integration platform for the biomedical domain
lists: Crux tandem mass spectrometry analysis software
lists: CellProfiler Analyst
lists: Scirus - for scientific information only
lists: SRS
lists: KEGG
lists: Antibodypedia
lists: SWISS-MODEL Repository
lists: BTKbase
lists: ExTopoDB
lists: MINAS - Metal Ions in Nucleic AcidS
lists: Tripod
lists: NIH electronic Research Materials catalogue
lists: Alliance for Cellular Signaling Molecule Pages Database
lists: Death Domain database
lists: Cube-DB
lists: OntoQuest
lists: EASE: the Expression Analysis Systematic Explorer
lists: Greglist
lists: Chloroplast Genome Database
lists: Montage RTS2000
lists: BGI-RISe - Beijing Genomics Institute Rice Information System
lists: ApiDB CryptoDB
lists: Chilibot: Gene and Protein relationships from MEDLINE
lists: AutDB
lists: DAVID
lists: Dataverse Network Project
lists: Binding MOAD
lists: Biological Magnetic Resonance Data Bank (BMRB)
lists: RNAhybrid
lists: RegulonDB
lists: Artemis: Genome Browser and Annotation Tool
lists: Genomedata
lists: CATSS - Child and Adolescent Twin Study in Sweden
lists: Viking Viewer for Connectomics
lists: SpliceDB
lists: Galaxy
lists: SPM
lists: Hyper Cell Line Database
lists: MeGX
has parent organization: University of California at San Diego; California; USA 		NSF 1216893 THIS RESOURCE IS NO LONGER IN SERVICE nlx_152536 http://www.3dvcell.org/conference-toward-3d-virtual-cell SCR_001377 3D Virtual Cell 2026-08-21 12:36:30 0

Can't find your Tool?

We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.

Can't find the RRID you're searching for? X
X

  1. Neuroscience Information Framework Resources

    Welcome to the NIF Resources search. From here you can search through a compilation of resources used by NIF and see how data is organized within our community.

  2. Navigation

    You are currently on the Community Resources tab looking through categories and sources that NIF has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.

  3. Logging in and Registering

    If you have an account on NIF then you can log in from here to get additional features in NIF such as Collections, Saved Searches, and managing Resources.

  4. Searching

    Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:

    1. Use quotes around phrases you want to match exactly
    2. You can manually AND and OR terms to change how we search between words
    3. You can add "-" to terms to make sure no results return with that term in them (ex. Cerebellum -CA1)
    4. You can add "+" to terms to require they be in the data
    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search

  5. Collections

    If you are logged into NIF you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.

About

Welcome to the Neuroscience Information Framework Project, designed to serve the biomedical research community. NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedical resources, and the largest ontology for neuroscience on the web.  We welcome all feedback and suggestions and are actively looking for resource providers to make their resources accessible through NIF. Learn about the tools available to help you share your data and discover a dynamic inventory of Web-based neuroscience resources.

Recent News Entries

Recommendations for repositories and scientific gateways from a neuroscience perspective

NEURON course at the CNS meeting

Neuron Course this year has just been announced!

Contact Us

About SciCrunch | Privacy Policy | Terms of Service

SciCrunch