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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Leica: DMRE Fluorescence Microscope Resource Report Resource Website 1+ mentions |
Leica: DMRE Fluorescence Microscope (RRID:SCR_000011) | Leica DMRE microscope | instrument resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on July 31,2025. Microscope that enables bright field and fluorescence imaging options. | microscope, fluorescence, imaging, hardware, instrument, equipment, USEDit | has parent organization: Leica Microsystems | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1wdHpvLSM220N2HdsOjW8rK2mWlPoJEcP/view?usp=drivesdk | SciRes_000155 | SCR_000011 | Fluorescence Leica DMRE microscope | 2026-09-03 04:43:00 | 9 | ||||||
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Leica: TCS SPE Resource Report Resource Website 10+ mentions |
Leica: TCS SPE (RRID:SCR_002140) | TCS SPE | instrument resource | High resolution, compact and robust confocal that enables immunohistochemical colocalization analysis of florescent markers. Leica TCS SPE confocal point-scanning, spectral system for fluorescence imaging of live or fixed cells. | confocal microscope, imaging, instrument, equipment, hardware | has parent organization: Leica Microsystems | Restricted | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_002140.pdf | SciRes_000154 | http://www.leica-microsystems.com/fileadmin/downloads/Leica%20TCS%20SPE/Brochures/Leica%20TCS%20SPE-Brochure_EN.pdf | SCR_002140 | Leica TCS SPE confocal microscope | 2026-09-03 04:45:14 | 33 | |||||
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BD Biosciences: LSR II Flow Cytometer Resource Report Resource Website 10+ mentions |
BD Biosciences: LSR II Flow Cytometer (RRID:SCR_002159) | LSR II Flow Cytometer | instrument resource | Benchtop high-performance cell sorter with multiple lazer, detector and fluoroscrome options. Allows detection of 12 parameters (10 color conjugates, forward and sideward scatter). | flow cytometer, instrument, equipment, hardware | has parent organization: BD Biosciences | THIS RESOURCE IS NO LONGER IN SERVICE | https://drive.google.com/file/d/1iqsXa8XNCYWutCswBRYBWluHGag0lOSx/view?usp=drivesdk | Model_Number_BD LSR II, SciRes_000152 | https://fccf.sitehost.iu.edu/pdf/BDLSRIIUserGuide.pdf | http://www.rockefeller.edu/fcrc/pdf/BD_LSRII_Brochure_SJ-0142-00.pdf | SCR_002159 | 2026-09-03 04:45:11 | 43 | |||||
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COGNISION Resource Report Resource Website 1+ mentions |
COGNISION (RRID:SCR_002362) | COGNISION | software resource | A portable, highly integrated, internet-enabled, hardware / software platform and patient management system, which includes an online Patient Manager module which complies with the HIPAA Final Security Rule, an event-related potential (ERP) Viewer module to view and analyze raw and average ERP waves, and a Protocol Editor module to simplify the choice and administration of selected ERP protocols. It is also easy to train and administer with non-specialized personnel, and is designed to be used in an out-patient setting. COGNISION TM with auditory or visual event-related potential (ERP) technology, provides a direct physiologic measure of patients' cognitive processing (i.e., a cognitive biomarker). | eeg, eeg, meg, electrocorticography, event-related potentials, hardware, physiological recording, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | nlx_155724 | http://www.nitrc.org/projects/neuronetrix | SCR_002362 | COGNISION (TM) System | 2026-09-03 04:45:23 | 2 | ||||||
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OEI: fMRI compatible olfactometer Resource Report Resource Website 1+ mentions |
OEI: fMRI compatible olfactometer (RRID:SCR_002507) | OEI fMRI compatible olfactometer | instrument resource | A computerized, odor delivery device that can be used for basic research applications including mapping olfactory centers, cognitive / learning research, neuro-marketing among other uses. Additional products including tests for odor threshold, odor identification, odor discrimination and odor memory. | experiment control, hardware, magnetic resonance, stimulus presentation, odor, olfactory, instrument, equipment | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | Commercial License | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/main/PDF/SCR_002507.pdf | nlx_155907 | http://www.nitrc.org/projects/oei, http://www.osmicenterprises.com/docs/OsmicFMRIOlfactomterManual%207-1-13.pdf | SCR_002507 | 2026-09-03 04:45:26 | 4 | ||||||
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G protein receptor interaction feature finding instrument Resource Report Resource Website 10+ mentions |
G protein receptor interaction feature finding instrument (RRID:SCR_008343) | analysis service resource, production service resource, resource, service resource | Griffin (G-protein-receptor interacting feature finding instrument) is a high-throughput system to predict GPCR - G-protein coupling selectively with the input of GPCR sequence and ligand molecular weight. This system consists of two parts: 1) HMM section using family specific multiple alignment of GPCRs, 2) SVM section using physico-chemical feature vectors in GPCR sequence. G-protein coupled receptors (GPCR), which is composed of seven transmembrane helices, play a role as interface of signal transduction. The external stimulation for GPCR, induce the coupling with G-protein (Gi/o, Gq/11, Gs, G12/13) followed by different kinds of signal transduction to inner cell. About half of distributed drugs are intending to control this GPCR - G-protein binding system, and therefore this system is important research target for the development of effective drug. For this purpose, it is necessary to monitor, effectively and comprehensively, of the activation of G-protein by identifying ligand combined with GPCR. Since, at present, it is difficult to construct such biochemical experiment system, if the answers for experimental results can be prepared beforehand by using bioinformatics techniques, large progress is brought to G-protein related drug design. Previous works for predicting GPCR-G protein coupling selectivity are using sequence pattern search, statistical models, and HMM representations showed high sensitivity of predictions. However, there are still no works that can predict with both high sensitivity and specificity. In this work we extracted comprehensively the physico-chemical parameters of each part of ligand, GPCR and G-protein, and choose the parameters which have strong correlation with the coupling selectivity of G-protein. These parameters were put as a feature vector, used for GPCR classification based on SVM. | drug, alignment, biochemical, bioinformatic, coupling, gpcr, g-protein, helix, instrument, interface, ligand, molecular, pattern, physico-chemical, receptor interacting, sequence, signal transduction, stimulation, svm, system, technique, transmembrane, weight, instrument, equipment, hardware, bio.tools |
is listed by: bio.tools is listed by: Debian has parent organization: Computational Biology Research Center Core Facility |
National Institute of Advanced Industrial Science and Technology | nif-0000-25210, biotools:griffin | https://bio.tools/griffin | SCR_008343 | Griffin | 2026-09-03 04:49:34 | 21 | |||||||
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Chemical Methods Ontology Resource Report Resource Website 1+ mentions |
Chemical Methods Ontology (RRID:SCR_003286) | CHMO, RSC CMO | controlled vocabulary, data or information resource, ontology | An ontology that describes methods used to collect data in chemical experiments, such as mass spectrometry and electron microscopy; preparing and separating material for further analysis, such as sample ionization, chromatography, and electrophoresis; and synthesizing materials, such as epitaxy and continuous vapor deposition. It also describes the instruments used in these experiments, such as mass spectrometers and chromatography columns. It is intended to be complementary to the Ontology for Biomedical Investigations (OBI). | obo, chemistry, analytical chemistry, physical chemistry, material chemistry, method, health, mass spectrometry, electron microscopy, chemical experiment, sample ionization, chromatography, electrophoresis, instrument |
is listed by: BioPortal is listed by: OBO is listed by: Google Code is listed by: Ontobee is related to: Information Artifact Ontology is related to: Ontology for Biomedical Investigations has parent organization: Royal Society of Chemistry |
Free, Available for download, Freely available | nlx_157363 | http://purl.bioontology.org/ontology/CHMO, http://purl.obolibrary.org/obo/chmo.owl, http://www.ontobee.org/browser/index.php?o=CHMO | https://code.google.com/p/rsc-cmo/ | SCR_003286 | RSC Chemical Methods Ontology | 2026-09-03 04:46:13 | 1 | |||||
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Sirius Analytical Resource Report Resource Website |
Sirius Analytical (RRID:SCR_003945) | Sirius | commercial organization | Organization that designs and manufactures analytical instrumentation to measure physicochemical parameters for the pharmaceutical and biotech industry, as well as offers physicochemical data and consultancy services. Their instruments provide accurate and reliable values for pKa, log P, log D, solubility and dissolution, particle size and shape analysis. These critical physicochemical parameters are important in drug formulation, and also influence the ability of New Chemical Entities to cross biological membranes such as the gastro-intestinal tract, blood-brain barrier, skin and cell walls. Sirius also offers an analytical service for high quality PhysChem outsourcing, used by hundreds of clients worldwide. | measurement, instrument, chemical analysis, physicochemical, drug, small molecule, biotherapeutics, surface imaging, size, shape, drug development | is related to: ORBITO | nlx_158338 | http://www.sirius-analytical.com/ | SCR_003945 | Sirius - The Science of Measurement, Sirius Analytical Instruments Ltd., Sirius Analytical Ltd | 2026-09-03 04:46:48 | 0 | |||||||
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Robotic Flower System for Bee Behavior project Resource Report Resource Website |
Robotic Flower System for Bee Behavior project (RRID:SCR_021584) | data or information resource, instrument resource, portal, project portal | Portal provides system of robotic artificial flowers to study bumble bee behavior. System is designed to capture data when animal is feeding by placement of IR beams that are broken when engaged on flowers feeding mechanism and sends data to control unit.Developed by University of Oulu in Finland scientists. System includes control unit, separate artificial flowers, and personal computer. Control unit is to handle electronics of flowers, collect data from them, and to send data to computer. Flowers contain infrared sensor, their associated electronics, and electromechanical device that offers small, precise amount of sugar solution from reservoir. Computer runs software that controls refilling rate and data collection via the control unit. Circuit diagrams, parts list, and control software and source code are available in paper supplemental information. | Robotic artificial flowers, study bumble bee behavior, animal feeding data, flowers feeding mechanism, OpenBehavior, Instrument | is listed by: OpenBehavior | DOI:10.1002/ece3.2062 | Free, Freely available | SCR_021584 | Robotic Flower System for Bee Behavior | 2026-09-03 04:57:31 | 0 | ||||||||
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Homecage Task Training and Mesoscale Imaging project Resource Report Resource Website |
Homecage Task Training and Mesoscale Imaging project (RRID:SCR_021580) | data or information resource, instrument resource, portal, project portal | Project to build and use new generation of home cages with emphasis on training for simple headfixed tasks during simultaneous autonomous acquisition of mesoscale brain imaging data. Homecage platform for automated task training and mesoscale brain imaging for mice developed by University of British Columbia scientists. | Instrument, automated task training, mesoscale brain imaging, mice, OpenBehavior |
is listed by: OpenBehavior is related to: AutoHeadFix has parent organization: University of British Columbia; British Columbia; Canada |
DOI:10.7554/elife.55964 | Free, Freely available | SCR_021580 | Homecage Task Training and Mesoscale Imaging | 2026-09-03 04:57:14 | 0 | ||||||||
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OpenMV project Resource Report Resource Website |
OpenMV project (RRID:SCR_021579) | data or information resource, instrument resource, portal, project portal | Portal provides system capable of frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection (with TensorFlow Lite), and more. Supports very easy to use GUI, the OpenMV IDE. | Instrument, frame differencing, color tracking, marker tracking, face detection, eye tracking, person detection, OpenBehavior |
is listed by: OpenBehavior is related to: OpenMV |
Free, Freely available | SCR_021579 | OpenMV system | 2026-09-03 04:57:39 | 0 | |||||||||
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Tetroplater Resource Report Resource Website |
Tetroplater (RRID:SCR_021578) | data or information resource, instrument resource, portal, project portal | Portal provides open source circuit for microwire tetrode gold plating. Circuit includes impedance meter and current generator for tetrode gold plating. Developed by University of Toyama scientist. | Instrument, neuronal activity, recording neuronal activity, microwire tetrode gold plating, OpenBehavior | is listed by: OpenBehavior | DOI:10.3791/1098 | Free, Freely available | SCR_021578 | 2026-09-03 04:57:15 | 0 | |||||||||
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OpenSpritzer Resource Report Resource Website |
OpenSpritzer (RRID:SCR_021575) | data or information resource, instrument resource, portal, project portal | Portal provides open hardware used in labs for administering picoliters of liquid to biological samples. Pressure ejection system developed by University of Sussex scientist for reliably delivering picolitre volumes. | Instrument, administering picoliters of liquid, pressure ejection system, delivering picolitre volumes, OpenBehavior |
is listed by: OpenBehavior has parent organization: University of Sussex; Brighton; United Kingdom |
DOI:10.1038/s41598-017-02301-2 | Free, Freely available | SCR_021575 | 2026-09-03 04:57:39 | 0 | |||||||||
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Pulse Pal project Resource Report Resource Website |
Pulse Pal project (RRID:SCR_021576) | data or information resource, instrument resource, portal, project portal | Portal provides open source, low cost, programmable pulse train generator for physiology and behavior. Device allows users to create and trigger software defined trains of voltage pulses with high temporal precision. Arduino powered device that generates precise sequences of voltage pulses for neural stimulation and stimulus control. Controlled either through its APIs in MATLAB, Python and C plus plus, or as stand-alone instrument using its oLED screen and clickable thumb joystick. | Instrument, pulse train generator, Arduino powered device, neural stimulation, stimulus control, OpenBehavior |
is listed by: OpenBehavior is related to: Pulse Pal |
Free, Freely available | SCR_021576 | Pulse Pal system, Pulse Pal generator | 2026-09-03 04:57:21 | 0 | |||||||||
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TRIO Platform Resource Report Resource Website |
TRIO Platform (RRID:SCR_021596) | data or information resource, instrument resource, portal, project portal | Portal provides low profile in vivo imaging support and restraint system for mice. System is compact and provides sturdy head fixation, gas anesthesia mask, and warm water bed. Compact design allows to work with variety of microscope stages and use of 3D printed components makes this design customizable. | Instrument, mice neural function, imaging support, restraint system, fixation, gas anesthesia mask, warm water bed, OpenBehavior | is listed by: OpenBehavior | DOI:10.3389/fnins.2016.00169 | Free, Freely available | SCR_021596 | Three-In-One Platform | 2026-09-03 04:57:25 | 0 | ||||||||
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Visual Discrimination with an iPad Resource Report Resource Website |
Visual Discrimination with an iPad (RRID:SCR_021593) | data or information resource, instrument resource, portal, project portal | Portal provides touchscreen platform developed by Texas Christian University scientists. iPad apparatus set up consists of four wall operant chamber, remote desktop program, Visual Basic 6 software, and single wireless iPad. Wireless iPad allows for flexibility in setups during performing visual discrimination behavioral experiments. | Instrument, iPad apparatus, four wall operant chamber, remote desktop program, Visual Basic 6 software, wireless iPad, visual discrimination tasks, OpenBehavior |
is listed by: OpenBehavior has parent organization: Texas Christian University; Fort Worth; USA |
DOI:10.1016/j.beproc.2012.11.013 | Free, Freely available | http://www.drkennethleising.com/research/tbes/ | SCR_021593 | 2026-09-03 04:57:16 | 0 | ||||||||
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StimDuino Resource Report Resource Website |
StimDuino (RRID:SCR_021594) | data or information resource, instrument resource, portal, project portal | Portal provides Arduino controlled stimulus isolator that allows for highly accurate, reproducible automated setting of stimulation currents. Automatic stimulation patterns are software controlled and parameters are set from Matlab coded simple, intuitive and user friendly graphical user interface. | Instrument, Arduino controlled stimulus isolator, reproducible automated setting, stimulation currents, OpenBehavior | DOI:10.1016/j.jneumeth.2015.01.016 | Free, Freely available | SCR_021594 | 2026-09-03 04:57:40 | 0 | ||||||||||
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CHEndoscope Resource Report Resource Website 1+ mentions |
CHEndoscope (RRID:SCR_021587) | data or information resource, instrument resource, portal, project portal | Portal provides open source Compact Head Mounted Endoscope for imaging in freely behaving mouse. Includes accessible and flexible set of calcium imaging tools for neuroscience research community. | Instrument, compact head mounted endoscope, imaging in awake behaving mouse, OpenBehavior. |
is listed by: OpenBehavior is related to: chendoscope |
DOI:10.1002/cpns.51 | Free, Freely available | SCR_021587 | Compact Head Mounted Endoscope | 2026-09-03 04:57:40 | 2 | ||||||||
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Kent Scientific: SomnoFlow Low Flow Electronic Vaporizer Resource Report Resource Website 1+ mentions |
Kent Scientific: SomnoFlow Low Flow Electronic Vaporizer (RRID:SCR_021629) | instrument resource | Compact, standalone vaporizer that uses either ambient air with internal air pump or compressed gas. It delivers only anesthetic required by animal according to its weight with flows down to 0.05 LPM. Low flow isoflurane anesthesia machine. | Kent Scientific, SomnoFlow, electronic vaporizer, vaporizer, instrument, equipment, USEDit | is listed by: USEDit | SCR_021629 | SomnoFlow Electronic Vaporizer, Kent Scientific SomnoFlow Electronic Vaporizer | 2026-09-03 04:57:41 | 3 | ||||||||||
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Autonomous Training of a Forelimb Motor Task project Resource Report Resource Website |
Autonomous Training of a Forelimb Motor Task project (RRID:SCR_021562) | data or information resource, instrument resource, portal, project portal | Portal related to individualized tracking of self directed motor learning in group housed mice performing skilled lever positioning task in home cage. Provides system for fully autonomous training of group housed mice on forelimb motor task. Task is run and controlled by Raspberry Pi microcomputer, which allows for cages to be monitored remotely through active internet connection. System was developed by University of Ottawa scientists. | Instrument, individualized tracking, self directed motor learning, group housed mice, skilled lever positioning task, home cage, forelimb motor task, OpenBehavior |
is listed by: OpenBehavior is related to: Autonomous Training of a Forelimb Motor Task has parent organization: University of Ottawa; Ontario; Canada |
DOI:10.1152/jn.00115.2017 | Free, Freely available | SCR_021562 | Autonomous Training of a Forelimb Motor Task | 2026-09-03 04:57:21 | 0 |
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