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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
https://github.com/ICB-DCM/PESTO
Software customizable toolbox for parameter estimation in MathWorks MATLAB. Offers scalable algorithms for optimization, uncertainty and identifiability analysis which do not depend on any problem-specific assumptions.
Proper citation: PESTO (RRID:SCR_016891) Copy
https://github.com/csitron/Microscopy_tif_Channel_Quant_MATLAB
Software application for quantification of fluorescence channel area in TIFF images using MATLAB.
Proper citation: Microscopy_tif_Channel_Quant_MATLAB (RRID:SCR_026999) Copy
https://www.mathworks.com/products/computer-vision.html
Software tool to provide algorithms, functions, and apps for designing and testing computer vision, 3D vision, and video processing systems for MATLAB. You can perform object detection and tracking, as well as feature detection, extraction, and matching. For 3D vision, toolbox supports single, stereo, and fisheye camera calibration; stereo vision; 3D reconstruction; and lidar and 3D point cloud processing. Computer vision apps automate ground truth labeling and camera calibration workflows.
Proper citation: Computer Vision System Toolbox (RRID:SCR_017581) Copy
https://github.com/GuyButcher/alpha-helix-coordinate-frame-simulation
Source code for alpha-helix simulation framework written in Matlab. Specifically tested on Talin-1 Rod Domain.
Proper citation: alpha helix coordinate frame simulation (RRID:SCR_019320) Copy
https://github.com/KatrinSkerl/EvaluateMuscleTissueWithElastography/tree/main
Software tool that enables the automatic evaluation of muscle tissue on elastography imaging using MATLAB.
Proper citation: EvaluateMuscleTissueWithElastography (RRID:SCR_026737) Copy
https://github.com/caanlab/shiTools
Software tools for MRI and behavioral data analysis and visualization in MATLAB. SPM12/SPM25 is required for some of the functions.
Proper citation: shiTools (RRID:SCR_028886) Copy
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We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
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