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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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http://www.mcw.edu/cellbiology.htm

Our mission is to conduct fundamental research in the areas of cell biology, developmental biology and neurobiology, and to provide a first rate educational experience for students of the Medical College of Wisconsin and its Graduate School of Biomedical Sciences. Current research in the department is strong in two major areas; developmental biology and neurobiology. Postdoctoral research opportunities are available. In developmental biology there is a focus on growth, regeneration and transcription mediated pathways in such systems as neural crest differentiation, heart development, liver development and in the area of muscle atrophy and plasticity. In neurobiology there is a strength in vision with special focus on photoreceptor cell biology, color vision, plasticity in the visual cortex, and functional MRI of the visual system. The department is currently expanding its research efforts in both areas. Faculty in the department also participate in interdisciplinary graduate education through the Graduate Programs in Neuroscience and Biomedical Sciences, and through management of an interdisciplinary Graduate Program in Cell and Developmental Biology. The department also plays an essential role in medical education through its first year medical courses in Cell and Tissue Biology, Developmental Biology, and Clinical Human Anatomy. In addition, the department is a principal participant in an interdisciplinary neuroscience course which includes faculty from other departments within the medical college.

Proper citation: Medical College of Wisconsin Cell Biology Neurobiology and Anatomy (RRID:SCR_006562) Copy   


  • RRID:SCR_006435

    This resource has 1+ mentions.

http://folk.uio.no/einarro/Projects/KFM-index/

Provides a compact storage of de Bruijn subgraphs representing the k-subwords of a set of strings.

Proper citation: kFM-index (RRID:SCR_006435) Copy   


http://www.whoi.edu/

The world''s largest private, nonprofit ocean research, engineering and education organization.

Proper citation: Woods Hole Oceanographic Institution; Massachusetts; USA (RRID:SCR_006315) Copy   


https://borealisdata.ca/dataverse/dv/?q=*

Data repository to preserve and provide access to agricultural and environmental data produced during research projects undertaken at the University of Guelph including datasets on topics such as crop yield, soil moisture, weather and agroforestry. A special emphasis is placed on research funded by Ontario Ministry of Agriculture and Food (OMAF) and MRA.

Proper citation: Agri-environmental Research Data Repository (RRID:SCR_006317) Copy   


  • RRID:SCR_006438

http://learn.genetics.utah.edu/content/addiction/drugs/mouse.html

Mouse Party is an interactive website that teaches how various drugs disrupt the synapse by taking a look inside the brains of mice on drugs! Every drug of abuse has its own unique molecular mechanism. Where applicable, this presentation primarily depicts how drugs interact with dopamine neurotransmitters because this website focuses on the brain''s reward pathway. Mouse Party is designed to provide a small glimpse into the chemical interactions at the synaptic level that cause the drug user to feel ''high''. The simplified mechanisms of drug action presented here are just a small part of the story. When drugs enter the body they elicit very complex effects in many different regions of the brain. Often they interact with many different types of neurotransmitters and may bind with a variety of receptor types in a variety of different locations. For example, THC in marijuana can bind with cannabinoid receptors located on the presynaptic and/or postsynaptic cell in a synapse.

Proper citation: Mouse Party (RRID:SCR_006438) Copy   


http://w3.cns.org/university/nsimages/index2.asp

Data set of almost 2,000 neurosurgical images using a variety of search options.

Proper citation: Congress of Neurological Surgeons Online Image Database (RRID:SCR_006310) Copy   


  • RRID:SCR_006311

    This resource has 100+ mentions.

http://biocreative.sourceforge.net/

Community-wide effort (Challenge) for evaluating text mining and information extraction systems applied to the biological domain. It is focused on the comparison of methods and the community assessment of scientific progress, rather than on the purely competitive aspects. There is a considerable difficulty in constructing suitable gold standard data for training and testing new information extraction systems which handle life science literature. Thus the data sets derived from the BioCreAtIvE challenge - because they have been examined by biological database curators and domain experts - serve as useful resources for the development of new applications as well as helping to improve existing ones. Two main issues are addressed at BioCreAtIvE, both concerned with the extraction of biologically relevant and useful information from the literature. The first one is concerned with the detection of biologically significant entities (names) such as gene and protein names and their association to existing database entries. The second one is concerned with the detection of entity-fact associations (e.g. protein - functional term associations ).

Proper citation: BioCreative (RRID:SCR_006311) Copy   


http://obssr.od.nih.gov/index.aspx

An NIH office devoted to the study of the role of behavioral and social factors in illness and health. Its mission is to stimulate behavioral and social sciences research throughout NIH and to integrate these areas of research more fully into others of the NIH health research enterprise, thereby improving our understanding, treatment, and prevention of disease. To provide the OBSSR with counsel in fulfilling its mission, the Behavioral and Social Sciences Research Coordinating Committee (BSSR CC) serves as an internal advisory board. The Office of Behavioral and Social Sciences Research (OBSSR) opened officially on July 1, 1995. The major responsibilities of the office and its director, set forth in its formal mission statement, are: * To provide leadership and direction in the development, refinement, and implementation of a trans-NIH plan to increase the scope of and support for behavioral and social sciences research. * To inform and advise the NIH director and other key officials of trends and developments having significant bearing on the missions of the NIH, DHHS, and other federal agencies. * To serve as the principal NIH spokesperson regarding research on the importance of behavioral, social, and lifestyle factors in the causation, treatment, and prevention of diseases; and to advise and consult on these topics with NIH scientists and others within and outside the federal government. * To develop a standard definition of behavioral and social sciences research, assess the current levels of NIH support for this research, and develop an overall strategy for the uniform expansion and integration * of these disciplines across NIH institutes and centers. * To develop initiatives designed to stimulate research in the behavioral and social sciences arena, integrate a bio-behavioral perspective across the research areas of the NIH, and encourage the study of behavioral and social sciences across NIH''s institutes and centers. * To initiate and promote studies to evaluate the contributions of behavioral, social, and lifestyle determinants in the development, course, treatment, and prevention of illness and related public health problems. * To provide leadership in ensuring that findings from behavioral and social sciences research are disseminated to the public. * To sponsor seminars, symposia, workshops, and conferences at the NIH and at national and international scientific meetings on state-of-the-art behavioral and social sciences research. Funding Opportunities Announcements (FOA) Since opening its doors in 1995, The Office of Behavioral and Social Sciences Research (OBSSR) has worked to achieve the goals of its authorizing legislation by effectively highlighting and supporting the scientific opportunities that exist in basic and applied behavioral and social sciences research. Guided by its Strategic Plan, OBSSR has been working actively with its IC partners to develop funding opportunities in the behavioral and social sciences. Although OBSSR does not have grant-making authority, it has been active in organizing and funding (through transfers to NIH Institutes and Centers) a variety of trans-NIH research programs. Scientific Areas The Office of Behavioral and Social Sciences Researchs (OBSSR) leadership is crucial at a time when exciting scientific opportunities, persistent public health needs, and emergent public health challenges face our nation. The vision of the office is to bring together the biomedical, behavioral, and social science communities to work more collaboratively to solve complex pressing health challenges. Notable areas of research where OBSSR has led efforts and encourages research include: * Biopsychosocial Interactions * Methodology (including Systems Science and CBPR) * Genes, Behavior and Environment * Social and Cultural Factors in Health * Health and Behavior * Translation OBSSR Training & Education Opportunities The Office of Behavioral and Social Sciences Research (OBSSR) develops and coordinates training and career development opportunities with the NIH Institutes and Centers.

Proper citation: Office of Behavioral and Social Sciences Research (RRID:SCR_006554) Copy   


  • RRID:SCR_006549

    This resource has 1000+ mentions.

http://flybase.org/

Database of Drosophila genetic and genomic information with information about stock collections and fly genetic tools. Gene Ontology (GO) terms are used to describe three attributes of wild-type gene products: their molecular function, the biological processes in which they play a role, and their subcellular location. Additionally, FlyBase accepts data submissions. FlyBase can be searched for genes, alleles, aberrations and other genetic objects, phenotypes, sequences, stocks, images and movies, controlled terms, and Drosophila researchers using the tools available from the "Tools" drop-down menu in the Navigation bar.

Proper citation: FlyBase (RRID:SCR_006549) Copy   


http://www.marine-geo.org/inc/swagger/listings/imageserverinfo.json

API for requesting images from Global-Multi Resolution Topography (GRMT).

Proper citation: Global-Multi Resolution Topography Image Service (RRID:SCR_006347) Copy   


http://nmri.niddk.nih.gov/

Communication network of current and potential biomedical research investigators and technical personnel from traditionally under-served communities: African American, Hispanic American, American Indian, Alaskan Native, Native Hawaiian, and other Pacific Islanders. The major objective of the network is to encourage and facilitate participation of members of underrepresented racial and ethnic minority groups in the conduct of biomedical research in the fields of diabetes, endocrinology, metabolism, digestive diseases, nutrition, kidney, urologic and hematologic diseases. A second objective is to encourage and enhance the potential of the underrepresented minority investigators in choosing a biomedical research career in these fields. An important component of this network is promotion of two-way communications between network members and the NIDDK.

Proper citation: Network of Minority Health Research Investigators (RRID:SCR_006589) Copy   


http://ebiz.sfn.org/PersonifyEbusiness/MemberDirectory/tabid/143/Default.aspx

This directory contains proprietary and confidential information belonging to the Society for Neuroscience. It is designated a service to and for personal, noncommercial and information use only of its members and granting agencies. Note that links to individual websites are provided by SfN members and are in no way endorsed by the Society for Neuroscience. SfN reserves the right to remove any member information or web links which are contrary in nature to professional, scientific content. The Society for Neuroscience retains all ownership and proprietary rights in the directory and the information contained in the directory. Any commercial use or other solicitation is strictly prohibited. By continuing with your search inquiry, you are hereby agreeing to these provisions. This system is not intended for wholesale searches of large institutions, or of cities, states or countries. To prevent abuse, the system is set to return results only when the number of matching members is 200 or less. Searches returning a large number of matching members will have to be refined so that they return 200 or less.

Proper citation: Society for Neuroscience Membership Directory Search (RRID:SCR_006348) Copy   


http://hereditaryhearingloss.org/

Overview of the genetics of hereditary hearing impairment for researchers and clinicians. The site lists data and references for all known gene localizations and identifications for nonsyndromic hearing impairment, and several for syndromic hearing loss. For syndromic hearing impairment, only a few of the most frequent forms are covered. An atlas of cochlea with genes listed can be accessed from this site.

Proper citation: Hereditary Hearing Loss Homepage (RRID:SCR_006469) Copy   


http://health.usf.edu/medicine/mpp/index.htm

The Department of Molecular Pharmacology and Physiology supports the vision and goals of USF Health and the School of Biomedical Sciences. Our mission is to offer outstanding educational opportunities to medical students, graduate students, and fellows and to perform innovative biomedical research. Research in the Department is focused on interdisciplinary approaches to the study of the nervous and cardiovascular systems and related disorders, including Alzheimer''s disease and other neurodegenerative disorders, cardiovascular disease and stroke, diabetes, and neuropsychiatric disorders such as depression and drug addiction.

Proper citation: University of South Florida Department of Molecular Pharmacology and Physiology (RRID:SCR_006344) Copy   


  • RRID:SCR_006586

    This resource has 100+ mentions.

http://www.pombase.org/

Model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe. PomBase supports genomic sequence and features, genome-wide datasets and manual literature curation. PomBase also provides a community hub for researchers, providing genome statistics, a community curation interface, news, events, documentation, mailing lists, and welcomes data submissions.

Proper citation: PomBase (RRID:SCR_006586) Copy   


  • RRID:SCR_006461

    This resource has 1+ mentions.

http://webdav.tuebingen.mpg.de/u/karsten/Forschung/research.html?page=research&topic=SV-M&html=text

Software for accurate indel prediction using paired-end short reads.

Proper citation: SV-M (RRID:SCR_006461) Copy   


http://www.jsmf.org/

Supports research and scholarship to improve the quality of life by providing funding for grants in three program areas: studying complex systems, understanding human cognition, and mathematical and complex systems approaches for brain cancer. Types of awards include Fellowship Awards, Scholar Awards, and Collaborative Awards. * Studying Complex Systems: This program supports scholarship and research directed toward the development of theoretical and mathematical tools that can be applied to the study of complex, adaptive, nonlinear systems. It is anticipated that research funded in this program will address issues in fields such as biology, biodiversity, climate, demography, epidemiology, technological change, economic development, governance, or computation. * Understanding Human Cognition: This program supports research studying how neural systems are linked to and support cognitive functions and how cognitive systems are related to an organism's (preferably human) observable behavior. Studies with model organisms should justify why such models were selected and how data obtained from models advances our understanding of human cognition. * Mathematical & Complex Systems Approaches for Brain Cancer: (Collaborative Activity Awards grant type only.) Despite some recent cause for optimism for advancing the clinical treatment of brain cancers, for many patients brain tumor remains a devastating diagnosis. Progress against this disease has been stymied by limited understandings of the molecular, metabolic, and physiological characteristics of human brain cancers across multiple temporal and spatial scales and by the failure of many preclinical models to predict patient responses.

Proper citation: James S. McDonnell Foundation (RRID:SCR_006341) Copy   


  • RRID:SCR_006463

    This resource has 50+ mentions.

http://www.monster.com/

Global online employment solution for people seeking jobs and the employers who need great people. They''ve been doing this for over ten years, and have expanded from their roots as a job board to a global provider of a full array of job seeking, career management, recruitment and talent management products and services.

Proper citation: Monster (RRID:SCR_006463) Copy   


  • RRID:SCR_006336

    This resource has 1+ mentions.

http://divvy.ucsd.edu/

Software application for performing unsupervised machine learning and visualization with a focus on the clustering (separating data into groups) and dimensionality reduction (finding low dimensional structure in high dimensional data) subfields of machine learning. For visualization we provide support for both the whole dataset (e.g. a scatter plot) and points (e.g. transforming a particular point into an image). * Endlessly extensible. Every clusterer, reducer, point visualizer and dataset visualizer in Divvy is a plugin. We''ve provided a few big ones (K-means, PCA, scatter plot, &c.) and we''re hoping the community will use our plugin protocol to build many more. Each plugin defines its own UI, so your algorithm can look and behave the way that you want it to without top-down constraints. * Have lots of cores? Divvy is both task and data parallel. No longer will you be waiting for one algorithm to complete before you start another. Start as many as you want and keep using the UI. Only started one? With data parallelism we''ll still push your new MacBook Pro to 800% CPU utilization. * Part of your workflow: Export your clusterings and reductions to .csv and your visualizations to .png. Use your Matlab or R data with our Matlab/R to Divvy export tools available at http://github.com/jmlewis/divvy.

Proper citation: Divvy (RRID:SCR_006336) Copy   


  • RRID:SCR_006337

    This resource has 1+ mentions.

http://network.nature.com/

Nature Network is the professional networking website for scientists around the world. It''s an online meeting place where you and your colleagues can gather, share and discuss ideas, and keep in touch. It''s also where you can consult the community for answers to scientific questions or offer your expertise to help others. Additionally, using the Workbench, you can collate your online scientific tools or widgets together in a customizable workspace, allowing you to group your most important tools and information in the way that works best for you. Scientists can also benefit from interactions at the local level whether discussing local news, looking for jobs or finding out about events nearby. All features on Nature Network are completely free. To get the most out of the site, all you need to do is create a profile. You can also use your nature.com account details if you have one. Once you''re set up, here''s a selection of what you can do: *Manage My Profile *Manage My Contacts *Join or Start Groups *Join or Start Forums *Blog *Join a Hub *Customize Your Workbench *Ask a Question or Submit an Answer to Q&A

Proper citation: Nature Network (RRID:SCR_006337) Copy   



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