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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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commutator Resource Report Resource Website |
commutator (RRID:SCR_023919) | software resource, source code | Affordable commutator that is equipped with novel sensing system that improves online tracking of cable rotations without impairing the 1-photon calcium imaging via Miniscope. Commutator to allow freely moving behaviors while recording neural activity from platforms such as Miniscope V4 and OpenEphys. Used to perform calcium imaging. | OpenBehavior, sensing system, online tracking, cable rotations, freely moving behaviors, recording neural activity, calcium imaging |
is listed by: OpenBehavior is related to: Freibox |
PMID:37105720 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/freibox-and-an-open-source-commutator/ | SCR_023919 | open source commutator, commutator, Freibox commutator | 2026-08-29 11:33:27 | 0 | |||||||
|
Freibox Resource Report Resource Website |
Freibox (RRID:SCR_023918) | software resource, source code | Versatile open source behavioral system for investigating neuronal correlates of behavioral flexibility via 1-Photon Imaging in freely moving mice. Behavioral testing platform consists of FreiBox, novel low-cost Arduino behavioral setup, controlled by custom Python interface and integrates new licking sensor (strain gauge lickometer) for controlling spatial licking behavioral tasks. | Behavioral testing platform, OpenBehavior, strain gauge lickometer, licking sensor, controlling spatial licking, behavioral task, freely moving mice, |
is listed by: OpenBehavior is related to: commutator has parent organization: University of Freiburg; Baden-Wurttemberg; Germany |
PMID:37105720 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/freibox-and-an-open-source-commutator/ | SCR_023918 | 2026-08-29 11:33:40 | 0 | ||||||||
|
Lick Instance Quantifier Home cage Device Resource Report Resource Website 1+ mentions |
Lick Instance Quantifier Home cage Device (RRID:SCR_023802) | LIQ HD | instrument resource, software resource, source code | Arduino code, 3D print design files, and tutorial video on how to build LIQ HD system. Open source tool for recording undisturbed two-bottle drinking behavior in home cage environment. All designs and software are open source to allow other researchers to build on the system and adapt LIQ HD to their animal home cages. | OpenBehavior, LIQ HD system, recording behavior, undisturbed two-bottle drinking behavior, | is listed by: OpenBehavior | PMID:36997312 | Free, Available for upload, Freely available | https://edspace.american.edu/openbehavior/project/liq-hd/ | SCR_023802 | , LIQ HD system, LIQ HD: Lick Instance Quantifier Home cage Device | 2026-08-29 11:33:38 | 2 | ||||||
|
BrainWAVE Resource Report Resource Website 1+ mentions |
BrainWAVE (RRID:SCR_024396) | instrument resource, software resource, source code | Code to program and run flicker stimulation on BrainWAVE stimulator device. This brain oscillation stimulating software can be adapted across subjects and integrated into variety of experimental designs like electrophysiology, neuroimaging, EEG, MRI. Flexible method for noninvasive stimulation of brain rhythms across species. Used to measure effects of rhythmic brain activity on behavior. | OpenBehavior, Open source, noninvasive sensory flicker, deep brain stimulation, BrainWAVE stimulator device, measure effects of rhythmic brain activity, behavior | is listed by: OpenBehavior | PMID:36754625 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/brainwave/ | SCR_024396 | , Brain Wide-spectrum Audio/Visual Exposure, BrainWAVE: Noninvasive Rhythm Stimulation | 2026-08-29 11:33:39 | 6 | |||||||
|
AnimalTA Resource Report Resource Website 1+ mentions |
AnimalTA (RRID:SCR_023784) | software resource, source code | Software video tracking tool for tracking and analysing animal movement in different environments. | OpenBehavior, video tracking, tracking and analysing animal movement, animal movement in different environments, | is listed by: OpenBehavior | DOI:10.1111/2041-210X.14115 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/animalta/ | SCR_023784 | Animal Tracking and Analysis | 2026-08-29 11:33:38 | 2 | |||||||
|
HFOApp Resource Report Resource Website |
HFOApp (RRID:SCR_024864) | data analysis software, data processing software, software application, software resource | Software for detecting and identifying high frequency oscillations observed in EEG recordings. MATLAB based graphical user interface for High Frequency Oscillation marking. | OpenBehavior, High Frequency Oscillation marking, detecting and identifying high frequency oscillations, EEG recordings, | is listed by: OpenBehavior | PMID:34544760 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/hfoapp/ | SCR_024864 | High Frequency Oscillation App | 2026-08-29 11:33:47 | 0 | |||||||
|
linear actuator Resource Report Resource Website |
linear actuator (RRID:SCR_021613) | software resource, source code | Code and model files for open source linear actuator. Part of Pearce Lab Syringe Pump system. | Pearce Lab Syringe Pump, OpenBehavior |
is listed by: OpenBehavior is related to: Pearce Lab Syringe Pump project |
DOI:10.1371/journal.pone.0107216 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/syringe-pump/ | SCR_021613 | linear-actuator | 2026-08-29 11:33:24 | 0 | |||||||
|
Rodent Operant Bucket Resource Report Resource Website |
Rodent Operant Bucket (RRID:SCR_021610) | software resource, source code | Software tool as ROBucket source code. | ROBucket, OpenBehavior |
is listed by: OpenBehavior is related to: Rodent Operant Bucket project |
DOI:10.3758/s13428-015-0603-2 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/robucket/ | SCR_021610 | 2026-08-29 11:33:22 | 0 | ||||||||
|
chendoscope Resource Report Resource Website |
chendoscope (RRID:SCR_021616) | software resource, source code | Software tool as part of CHEndoscope. Acquisition software that interfaces with CHEndoscope Ximea USB camera. This code is compatible with Linux and Windows systems. | Acquisition software, CHEndoscope Ximea USB camera, OpenBehavior |
is listed by: OpenBehavior is related to: CHEndoscope |
DOI:10.1002/cpns.51 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/chendoscope/ | SCR_021616 | 2026-08-29 11:33:09 | 0 | ||||||||
|
AutoHeadFix Resource Report Resource Website |
AutoHeadFix (RRID:SCR_021617) | software resource, source code | Software Python code for automated control of behavioural apparatus and imaging for mice in home cage environment.Part of Homecage Task Training and Mesoscale Imaging system. | Automated control, behavioural apparatus, imaging for mice, home cage environment, OpenBehavior |
is listed by: OpenBehavior is related to: Homecage Task Training and Mesoscale Imaging project |
DOI:10.7554/elife.55964 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/training-mesoscale-imaging/ | SCR_021617 | 2026-08-29 11:33:22 | 0 | ||||||||
|
craniobot Resource Report Resource Website |
craniobot (RRID:SCR_021609) | software resource, software toolkit, source code | Software tool as part of Craniobot system.Generates, sends, and receives commands to communicate with the Craniobot. | Software resource, OpenBehavior |
is listed by: OpenBehavior is related to: Craniobot project |
DOI:10.1038/s41598-018-37073-w | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/craniobot/ | SCR_021609 | craniobot | 2026-08-29 11:33:09 | 0 | |||||||
|
Automated Home-Cage Functional Imaging Resource Report Resource Website |
Automated Home-Cage Functional Imaging (RRID:SCR_021607) | software resource, source code | Software tool as part of Automated Home Cage Functional Imaging system. | Software resource, OpenBehavior |
is listed by: OpenBehavior is related to: Automated Home-Cage Functional Imaging project |
DOI:10.1038/ncomms11611 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/automated-home-cage-functional-imaging/ | SCR_021607 | 2026-08-29 11:33:22 | 0 | ||||||||
|
Scintillate Resource Report Resource Website |
Scintillate (RRID:SCR_021531) | software resource, source code | Open source graphical viewer for time series calcium imaging evaluation and pre-processing. | image acquisition, time series calcium imaging evaluation, calcium imaging, |
is listed by: OpenBehavior is related to: Scintillate project |
DOI:10.1016/j.jneumeth.2016.08.010 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/scintillate/ | SCR_021531 | 2026-08-29 11:33:09 | 0 | ||||||||
|
flyPAD Resource Report Resource Website 1+ mentions |
flyPAD (RRID:SCR_021522) | software resource, source code | FPGA code for running main board of flyPAD. Code written in VHDL using Quartus 2 web edition software. | FPGA code, running main board of flyPAD, VHDL, Quartus 2, OpenBehavior |
is listed by: OpenBehavior is related to: flyPAD project |
DOI:10.1038/ncomms5560 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/optopad-and-flypad/ | SCR_021522 | 2026-08-29 11:33:24 | 1 | ||||||||
|
pyOS-5 Resource Report Resource Website |
pyOS-5 (RRID:SCR_022336) | software resource, source code | Operant Box code | OpenBehavior, neurophysiology |
is listed by: OpenBehavior is related to: pyOS-5 project |
DOI:10.1038/s41598-021-01717-1 | Free, Available for download, Freely available | https://edspace.american.edu/openbehavior/project/pyos-5/ | SCR_022336 | 2026-08-29 11:33:25 | 0 | ||||||||
|
Stytra Resource Report Resource Website |
Stytra (RRID:SCR_021500) | software resource, software toolkit | Open source software Python package to control stimulation and track behaviour.Provides timed stimulus presentation, interfacing with external devices and simultaneous real time tracking of behavioral parameters such as position, orientation, tail and eye motion in both freely swimming and head restrained preparations. | Control stimulation, track behaviour, closed loop behavioral experiments, larval zebrafish, behavioral parameters, position, orientation, tail, eye motion, freely swimming, head restrained, DeepLabCut, OpenBehavior |
is listed by: OpenBehavior is related to: Stytra project |
DOI:10.1371/journal.pcbi.1006699 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/stytra/ | SCR_021500 | 2026-08-29 11:31:29 | 0 | ||||||||
|
Worm Behavior Platform Resource Report Resource Website |
Worm Behavior Platform (RRID:SCR_021501) | software resource, software toolkit | Software tool as repository of documentation, software, and discussions to share worm tracking data and analysis routines.Open access repository for storing, accessing, and filtering data; interchange format for notating single or multi worm behavior; and file formats written in Python for feature extraction, review, and analysis. | Worm behavior data analysis, worm behavior data sharing, worm behavior data, Caenorhabditis elegans behavioral data, Worm tracker Commons Object Notation, OpenBehavior |
is listed by: OpenBehavior is related to: Worm Behavior Platform project |
DOI:10.1038/s41592-018-0112-1 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/worm-behavior-platform/ | SCR_021501 | Tracker Commons | 2026-08-29 11:31:19 | 0 | |||||||
|
Behavioral Observation Research Interactive Software Resource Report Resource Website 10+ mentions |
Behavioral Observation Research Interactive Software (RRID:SCR_021509) | BORIS | software application, software resource, standalone software | Open source event logging software for video/audio coding and live observations.Multiplatform standalone program that allows user specific coding environment for computer based review of previously recorded videos or live observations. | Specific coding environment, computer based review, previously recorded videos review, live observations review, OpenBehavior |
is listed by: OpenBehavior is related to: Behavioral Observation Research Interactive Software project |
DOI:10.1111/2041-210x.12584 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/boris/ | SCR_021509 | 2026-08-29 11:31:29 | 10 | |||||||
|
ArControl Resource Report Resource Website 1+ mentions |
ArControl (RRID:SCR_021605) | software application, software resource, standalone software | Software tool as Arduino UNO/Mega based, visual programming and real-time behavioral platform for neuroscience. It can run Go/No-Go, 2AFPC and Optogenetic stimulation tasks. Stand alone and intuitive Gaphical User Interface application.Part of ArControl system. | visual programming, real-time behavioral platform, control devices, deliver stimulation, monitor behavioral response, OpenBehavior |
is listed by: OpenBehavior is related to: ArControl project |
DOI:10.3389/fnbeh.2017.00244 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/arcontrol/ | SCR_021605 | 2026-08-29 11:31:27 | 1 | ||||||||
|
BonVision Resource Report Resource Website 1+ mentions |
BonVision (RRID:SCR_021534) | software resource, software toolkit | Open source software package for creating and controlling visual environments.Software package for Bonsai which allows for control of 2D and 3D environments. | Creating visual environments, controlling visual environments, Bonsai, 2D environment, 3D environments, OpenBehavior |
is listed by: OpenBehavior is related to: BonVision project |
DOI:10.1101/2020.03.09.983775 | Free, Available for download, Freely Available | https://edspace.american.edu/openbehavior/project/bonvision/ | SCR_021534 | 2026-08-29 11:31:27 | 1 |
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