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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Authority Synonyms Record Last Update Mentions Count
Gregory Fleming James Cystic Fibrosis Research Center
 
Resource Report
Resource Website
Gregory Fleming James Cystic Fibrosis Research Center (RRID:SCR_015392) access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal Research center that maintains core facilities available for studies of cell biology, ion transport, and translational aspects of cystic fibrosis research. cystic fibrosis foundation, ion transport, cell biology, cystic fibrosis research center is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Alabama at Birmingham School of Medicine; Alabama; USA
is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Assay Core
is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core
is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core
is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core
is parent organization of: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core
has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Assay Core
has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cell Model and Evaluation Core
has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Animal Models Core
has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Clinical and Translational Core
has organization facet: Gregory Fleming James Cystic Fibrosis Research Center Cystic Fibrosis Transmembrane Conductance Regulator Expression Core
is organization facet of: Cystic Fibrosis Research and Translation Centers
Cystic Fibrosis NIDDK P30DK072482;
Cystic Fibrosis Foundation
Available to the research community SCR_015392 SciCrunch Registry 2026-10-17 01:29:11 0
Cystic Fibrosis Center - University of Washington
 
Resource Report
Resource Website
Cystic Fibrosis Center - University of Washington (RRID:SCR_015401) access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal Research center that aims to provide resources and expertise to expedite development of potential new therapeutic approaches to correct dysfunctional CFTR and its secondary consequences, enhance understanding of evolving bacterial ecosystems and resultant host response in CF gastrointestinal and respiratory tracts, and how these interactions impact health. It also aims to develop improved assays, new drug screening assays, biomarkers and improved clinical outcome measures, as well as to better understand the metabolic and inflammatory consequences of CFTR dysfunction. cftr therapy, cystic fibrosis translational research, cftr dysfunction is listed by: NIDDK Information Network (dkNET)
has parent organization: University of Washington; Seattle; USA
is parent organization of: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core
is parent organization of: Cystic Fibrosis Center - University of Washington Host Response Core
is parent organization of: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program
is parent organization of: Cystic Fibrosis Center - University of Washington Microbiology Core
is parent organization of: Cystic Fibrosis Center - University of Washington Clinical Core
has organization facet: Cystic Fibrosis Center - University of Washington Clinical Core
has organization facet: Cystic Fibrosis Center - University of Washington Microbiology Core
has organization facet: University of Washington Genomics Core Cystic Fibrosis Research Translation Center and Research Development Program
has organization facet: Cystic Fibrosis Center - University of Washington Host Response Core
has organization facet: Cystic Fibrosis Center - University of Washington Administrative and Enrichment Core
is organization facet of: Cystic Fibrosis Research and Translation Centers
Cystic Fibrosis NIDDK P30DK089507 Available to the research community SCR_015401 SciCrunch Registry 2026-10-17 01:28:54 0
MMPC-University of Michigan Medical School
 
Resource Report
Resource Website
1+ mentions
MMPC-University of Michigan Medical School (RRID:SCR_015373) access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal Research center which aims to contribute to a national database of metabolic phenotyping data in wild-type mouse strains and a broad range of mouse models relevant to the pathogenesis and treatment of diabetes, obesity and associated metabolic disorders. It also aims to foster continued technical development, refinement of assay sensitivity and specificity, data reproducibility, and transmission of best research practices within the areas of fundamental and applied diabetes and obesity research. diabetes research center, obesity research center, mouse model research is listed by: NIDDK Information Network (dkNET)
has parent organization: National Mouse Metabolic Phenotyping Centers
has parent organization: University of Michigan; Ann Arbor; USA
is parent organization of: MMPC-University of Michigan Medical School Microbiome Core
is parent organization of: MMPC-University of Michigan Medical School Microvascular Complications Core
is parent organization of: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core
is parent organization of: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core
has organization facet: MMPC-University of Michigan Medical School Microbiome Core
has organization facet: MMPC-University of Michigan Medical School Animal Care and Germ-Free Mouse Core
has organization facet: MMPC-University of Michigan Medical School Metabolism Bariatric Surgery and Behavior Core
has organization facet: MMPC-University of Michigan Medical School Microvascular Complications Core
is organization facet of: National Mouse Metabolic Phenotyping Centers
NIDDK U2C-DK110768 Available to the research community, Acknowledgement requested SCR_015373 SciCrunch Registry 2026-10-17 01:28:56 1
Harvard Digestive Disease Center
 
Resource Report
Resource Website
Harvard Digestive Disease Center (RRID:SCR_015587) HDDC data or information resource, disease-related portal, organization portal, portal, topical portal Community of scientists focused on the study of epithelial cell function and mucosal biology including inflammation and host defense of the gastrointestinal tract. It focuses on the intestinal and inflammatory bowel diseases; gut microbiology; and stem cell and developmental biology of the intestine and liver in organ physiology, regenerative medicine, and metabolism. digestive disease, inflammatory bowel disease, epithelial cell function, mucosal biology, inflammation, stem cell biology is listed by: NIDDK Information Network (dkNET)
has parent organization: Harvard University; Cambridge; United States
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology
is parent organization of: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics
is parent organization of: Harvard Digestive Diseases Center Clinical Translational Research Program
is parent organization of: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material
has organization facet: Harvard Digestive Diseases Center Biomedical CORE B: Microscopy and Histopathology
has organization facet: Harvard Digestive Diseases Center Biomedical CORE C: Epithelial Cell and Mucosal Immunology
has organization facet: Harvard Digestive Diseases Center Biomedical CORE D: Gnotobiotic Mice, Microbiology and Metagenomics
has organization facet: Harvard Digestive Diseases Center Clinical Translational Research Program
has organization facet: Harvard Digestive Diseases Center Bio-Repository and Data Registry for Human Material
is organization facet of: Digestive Disease Centers
digestive disease, Inflammatory Bowel Disease, NIDDK P30 DK034854 Available to the research community SCR_015587 SciCrunch Registry 2026-10-17 01:28:58 0
Cerebrovascular Disease Knowledge Portal
 
Resource Report
Resource Website
10+ mentions
Cerebrovascular Disease Knowledge Portal (RRID:SCR_015628) CDKP data or information resource, database, disease-related portal, portal, topical portal Portal enables browsing, searching, and analysis of human genetic information linked to cerebrovascular disease and related traits, while protecting the integrity and confidentiality of the underlying data. human, genetic, information, cerebrovascular, disease, data, knowledge is listed by: NIDDK Information Network (dkNET)
has parent organization: Massachusetts General Hospital Labs and Facilities
cerebrovascular disease Accelerating Medicines Partnership in Type 2 Diabetes ;
NIH ;
NINDS
Free, Available for download SCR_016535 SCR_015628 SciCrunch Registry Cerebrovascular Disease Knowledge Portal (CDKP) 2026-10-17 01:28:59 17
University of Pennsylvania Diabetes Research Center
 
Resource Report
Resource Website
1+ mentions
University of Pennsylvania Diabetes Research Center (RRID:SCR_015732) DRC data or information resource, disease-related portal, portal, topical portal NIDDK center that serves diabetes-oriented investigators from University of Pennsylvania as well as additional institutions from the mid-Atlantic region. The Penn DRC represents many basic science and clinical departments at Penn and the other institutions, and supports research in diabetes and obesity via Scientific Cores, a Pilot and Feasibility Grant Program, and a series of seminars, retreats, and other academic enrichment activities. diabetes, research, univeristy of pennsylvania, upenn, obesity, metabolic disorder is listed by: NIDDK Information Network (dkNET) NIDDK P30DK19525 Available to affiliated researchers http://www.med.upenn.edu/, https://diabetescenters.org/ SCR_015732 SciCrunch Registry 2026-10-17 01:28:56 1
Mendeley Data
 
Resource Report
Resource Website
100+ mentions
Mendeley Data (RRID:SCR_015671) data or information resource, data repository, service resource, storage service resource Cloud-based data repository for storing, publishing and accessing scientific data. Mendeley Data creates a permanent location and issues Force 11 compliant citations for uploaded data. data repository, published data, citation, force 11, doi, dans, dans (data archiving and networking services) is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: DataCite
is listed by: re3data.org
is listed by: FAIRsharing
has parent organization: Mendeley
works with: DANS
Free, Public, The research community can contribute to this resource, Account required DOI:10.25504/FAIRsharing.3epmpp, DOI:10.17616/R3DD11, r3d100011868, DOI:10.17632 https://doi.org/10.17616/R3DD11, https://doi.org/10.17616/r3dd11, https://doi.org/10.17632/, https://dx.doi.org/10.17632/, https://fairsharing.org/10.25504/FAIRsharing.3epmpp, https://doi.org/10.17616/R3DD11 SCR_015671 SciCrunch Registry 2026-10-17 01:28:56 239
Stanford Diabetes Research Center
 
Resource Report
Resource Website
1+ mentions
Stanford Diabetes Research Center (RRID:SCR_015856) access service resource, service resource University-affiliated center that promotes research in diabetes and related metabolic and endocrine disorders at Stanford University. stanford, diabetes, research center, niddk, service resource is listed by: NIDDK Information Network (dkNET)
is listed by: Diabetes Research Centers
has organization facet: Stanford Diabetes Research Center Diabetes Immune Monitoring Core
has organization facet: Stanford Diabetes Research Center Stanford Islet Research Core
has organization facet: Stanford Diabetes Research Center Diabetes Clinical and Translational Core
has organization facet: Stanford Diabetes Research Center Diabetes Genomics Analysis Core
is organization facet of: Diabetes Research Centers
NIDDK P30 DK116074 Available to the scientific community SCR_015856 SciCrunch Registry 2026-10-17 01:29:02 1
Clinical Trials in Organ Transplantation (CTOT)
 
Resource Report
Resource Website
1+ mentions
Clinical Trials in Organ Transplantation (CTOT) (RRID:SCR_015859) CTOT consortium, data or information resource, organization portal, portal, project portal Project portal for a cooperative research program to improve short and long-term graft and patient survival. CTOT is an investigative consortium for conducting clinical and associated mechanistic studies that will lead to improved outcomes for transplant recipients. graft, graft patient, patient survival, clinical study, transplant, transplant recipient, mechanistic study is listed by: NIDDK Information Network (dkNET)
is listed by: Diabetes Research Centers
is related to: Clinical Trials in Organ Transplantation in Children (CTOT-C)
NIAID UM2 AI117870 Public, Available to the scientific community SCR_015859 SciCrunch Registry Clinical Trials in Organ Transplantation 2026-10-17 01:28:58 1
Clinical Trials in Organ Transplantation in Children (CTOT-C)
 
Resource Report
Resource Website
1+ mentions
Clinical Trials in Organ Transplantation in Children (CTOT-C) (RRID:SCR_015860) CTOT-C consortium, data or information resource, organization portal, portal, project portal Project portal for a cooperative research program sponsored by the National Institute of Allergy and Infectious Diseases (NIAID). CTOT-C is an investigative consortium for conducting clinical and associated mechanistic studies that will lead to improved outcomes for pediatric heart, lung, or kidney transplant recipients. heart, kidney, lung, pediatric, cooperative research program, niaid, clinical study, mechanistic study, transplant is listed by: NIDDK Information Network (dkNET)
is related to: Clinical Trials in Organ Transplantation (CTOT)
NIAID UM2 AI117870 Public, Available to the scientific community SCR_015860 SciCrunch Registry NIAID Clinical Trials in Organ Transplantation in Children, Clinical Trials in Organ Transplantation in Children, NIAID CTOT-C 2026-10-17 01:29:05 1
MetaCyto
 
Resource Report
Resource Website
1+ mentions
MetaCyto (RRID:SCR_016415) data analysis software, data processing software, software application, software resource, software toolkit Software tool for automated meta-analysis of mass and flow cytometry data. Provides functions for preprocessing, automated gating and meta-analysis of cytometry data and collection of cytometry data from the ImmPort database. automated, analysis, meta, flow, cytometry, data, bio.tools is listed by: Bioconductor
is listed by: NIDDK Information Network (dkNET)
is listed by: bio.tools
is listed by: Debian
is related to: The Immunology Database and Analysis Portal (ImmPort)
the National Institute of Allergy and Infectious Diseases HHSN272201200028C Free, Available for download, Freely available biotools:metacyto https://bio.tools/metacyto SCR_016415 SciCrunch Registry 2026-10-17 01:29:12 5
Human Cell Atlas
 
Resource Report
Resource Website
100+ mentions
Human Cell Atlas (RRID:SCR_016530) atlas, catalog, data or information resource, database, image, map, portal Software tool as a catalog of comprehensive reference of human cells based on their stable properties, transient features, locations and abundances. Map to show the relationships among its elements. Open data international collaborative project involving diverse scientific communities to provide a framework for understanding cellular dysregulation in human disease. human, cell, line, atlas, catalog, map, open, data, international, project, FASEB list is listed by: NIDDK Information Network (dkNET)
is related to: Optimus Pipeline
is related to: Smart-seq2 Multi-Sample Pipeline
is related to: Broad Institute Genomics Platform
PMID:29206104 Free, Available for download, Freely available SCR_016530 SciCrunch Registry 2026-10-17 01:29:28 127
Cardiovascular Disease Knowledge Portal
 
Resource Report
Resource Website
10+ mentions
Cardiovascular Disease Knowledge Portal (RRID:SCR_016536) data or information resource, database, disease-related portal, portal, topical portal Platform for analysis of the genetics of cardiovascular disease.Used for searching and analysis of human genetic information linked to myocardial infarction, atrial fibrillation and related traits while protecting the integrity and confidentiality of the data. genetic, data, cardiovascular, disease, human is listed by: NIDDK Information Network (dkNET) cardiovascular disease, myocardial infarction, atrial fibrillation Accelerating Medicines Partnership in Type 2 Diabetes ;
National Institute of Cardiovascular Diseases and Stroke
Free, Available for download, Google ID required, Tutorial available SCR_016536 SciCrunch Registry 2026-10-17 01:29:07 31
HASP
 
Resource Report
Resource Website
HASP (RRID:SCR_016615) HASP data or information resource, data processing software, data visualization software, database, software application, software resource Web server to visualize phylogenetic, biochemical, and immunological hemagglutinin data in the three-dimensional context of homology models. Database and structural visualization platform for comparative models of influenza A hemagglutinin proteins. structural, visualization, phylogenetic, biochemical, immunological, hemagglutinin, data, 3D, is listed by: NIAID
is listed by: NIDDK Information Network (dkNET)
NIAID DOI:10.1186/1471-2105-14-197 Free, Freely available SCR_016615 SciCrunch Registry HemAgglutinin Structure Prediction, Hemagglutinin Structure Prediction 2026-10-17 01:29:30 0
Illuminating the Druggable Genome
 
Resource Report
Resource Website
50+ mentions
Illuminating the Druggable Genome (RRID:SCR_016924) IDG consortium, data or information resource, data repository, organization portal, portal, service resource, storage service resource Program to improve understanding of properties and functions of proteins that are currently unannotated within three most commonly drug protein families: targeted G-protein coupled receptors, ion channels, and protein kinases. Includes Data and Resource Generating Centers (DRGC), Knowledge Management Center (KMC), and Resource Dissemination and Outreach Center (RDOC). understudied, target, protein, G protein, coupled, receptor, ion, channel, kinase, bio.tools is recommended by: National Library of Medicine
is listed by: NIDDK Information Network (dkNET)
is listed by: bio.tools
is listed by: Debian
NIH Common Fund biotools:pharos https://pharos.nih.gov/, https://bio.tools/pharos, https://darkmatter.ucsf.edu/about https://druggablegenome.net SCR_016924 SciCrunch Registry Pharos, Illuminating the Druggable Genome, IDG, Illuminating Druggable Genome 2026-10-17 01:29:11 64
Prevention of Lower Urinary Tract Symptoms
 
Resource Report
Resource Website
Prevention of Lower Urinary Tract Symptoms (RRID:SCR_016923) PLUS consortium, data or information resource, organization portal, portal Research consortium from many different fields to plan, perform and analyze the studies that are needed to help researchers conduct future prevention and intervention for Lower Urinary Tract Symptoms (LUTS) in women. plan, perform, analyze, data, prevent, lower, urinary, track, symptom, women is listed by: NIDDK Information Network (dkNET)
is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology
is related to: University of Minnesota Medical School; Minnesota; USA
NIDDK SCR_016923 SciCrunch Registry Prevention of Lower Urinary Tract Symptoms, Prevention LUTS, PLUS 2026-10-17 01:29:19 0
The Human BioMolecular Atlas Program
 
Resource Report
Resource Website
10+ mentions
The Human BioMolecular Atlas Program (RRID:SCR_016922) HuBMAP data or information resource, funding resource, portal, project portal Project to facilitate research on single cells within tissues by supporting data generation and technology development to explore the relationship between cellular organization and function, as well as variability in normal tissue organization at the level of individual cells. Framework for functional mapping the human body with cellular resolution.Designed to support diverse spatial and non-spatial omics and imaging data types and to integrate with a wide range of analysis workflows. organism, cell, tissue, data, generation, technology, organization, functional, mapping, human, body uses: Azimuth
is listed by: NIDDK Information Network (dkNET)
is related to: HuBMAP Data Portal
NIH https://humanatlas.io/omap, https://avr.hubmapconsortium.org/, https://commonfund.nih.gov/HuBMAP, https://zenodo.org/records/5244551 SCR_016922 SciCrunch Registry Human BioMolecular Atlas Program, HuBMAP, The Human BioMolecular Atlas Program, NIH HuBMAP 2026-10-17 01:29:11 26
Kidney Precision Medicine Project
 
Resource Report
Resource Website
50+ mentions
Kidney Precision Medicine Project (RRID:SCR_016920) KPMP availability annotation standard, consortium, data or information resource, disease-related portal, narrative resource, nif annotation standard, organization portal, portal, project portal, standard specification, the community can contribute to this resource, topical portal Project to ethically obtain and evaluate human kidney biopsies from participants with Acute Kidney Injury (AKI) or Chronic Kidney Disease (CKD), create a kidney tissue atlas, define disease subgroups, and identify critical cells, pathways, and targets for novel therapies. Used to develop the next generation of software tools to visualize and understand the various components of kidney diseases and to optimize data collection. Multi site collaboration comprised of patients, clinicians, and investigators from across the United States. ethically, obtain, evaluate, human, kidney, biopsy, collaboration, patient, clinician, researcher, acute, injury, chronic, disease, tissue, atlas, cell, pathway, target, novel, therapy, data, collection is listed by: NIDDK Information Network (dkNET)
is related to: Kidney Tissue Atlas
Acute Kidney Injury, Chronic Kidney Disease NIDDK Open resource for academics, industry, and the broader scientific community SCR_016920 SciCrunch Registry Kidney Precision Medicine Project, The Kidney Precision Medicine Project 2026-10-17 01:29:11 72
STRENDA
 
Resource Report
Resource Website
1+ mentions
STRENDA (RRID:SCR_017422) STRENDA data or information resource, data repository, database, service resource, storage service resource Storage and search platform supported by Beilstein-Institut that incorporates STRENDA Guidelines. For authors who prepare manuscript containing functional enzymology data, STRENDA DB provides means to ensure that data sets are complete and valid before submitting them to journal. Storage, Beilstein Institut, functional, enzymology, data, complition, validation, dataset, guideline, standard, reporting is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
is listed by: DataCite
is listed by: re3data.org
is listed by: FigShare
Restricted DOI:10.22011, DOI:10.17616/R3536N, DOI:10.25504/FAIRsharing.ekj9zx, r3d100012329 http://www.strenda-db.org/, https://doi.org/10.17616/R3536N, https://doi.org/10.17616/r3536n, https://doi.org/10.22011/, https://dx.doi.org/10.22011/, https://fairsharing.org/10.25504/FAIRsharing.ekj9zx, https://doi.org/10.17616/R3536N SCR_017422 SciCrunch Registry , Standards for Reporting Enzymology Data, Beilstein-Institut, STRENDA 2026-10-17 01:29:27 3
Image Data Resource (IDR)
 
Resource Report
Resource Website
1+ mentions
Image Data Resource (IDR) (RRID:SCR_017421) IDR data repository, service resource, storage service resource Public repository of reference image datasets from published scientific studies. Platform for publishing, mining and integrating bioimaging data, following FAIR principles and Euro-BioImaging/ELIXIR imaging strategy using OMERO and Bio-Formats open source software built by Open Microscopy Environment. Deployed on OpenStack cloud running on EMBL-EBI’s Embassy resource, it includes image data linked to independent studies from genetic, RNAi, chemical, localisation and geographic high content screens, super resolution microscopy, and digital pathology. Repository, reference, image, published, annotated, dataset, FAIR is recommended by: NIDDK Information Network (dkNET)
is recommended by: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
Free, Available for download, Freely available r3d100012435 https://doi.org/10.17616/R3XR0R SCR_017421 SciCrunch Registry Image Data Resource, IDR, Image Data Resource (IDR) 2026-10-17 01:29:19 1

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